Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.7e-64 248.4 119 100.0
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.4e-58 226.9 119 88.2
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 9.3e-57 223.4 119 87.4
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 5.8e-51 204.1 119 79.0
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-50 203.0 119 77.3
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-50 203.0 119 77.3
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-50 203.0 119 78.2
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-50 202.6 118 77.1
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-49 199.9 118 77.1
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-49 199.9 118 77.1
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 4.2e-49 198.0 118 76.3
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 4.2e-49 198.0 119 76.5
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 9.3e-49 196.8 117 76.1
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.9e-48 193.7 117 72.6
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-47 192.6 117 73.5
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-44 181.0 114 72.8
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-44 181.0 114 72.8
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 4.9e-42 174.5 108 75.0
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.3e-30 135.2 113 54.0
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.3e-30 134.8 114 52.6
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.5e-25 117.9 114 48.2
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.1e-20 102.1 113 44.2
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 1.7e-18 96.3 119 41.2
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.1e-17 93.6 111 42.3
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 2.5e-17 92.4 119 40.3
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 5.5e-17 91.3 116 41.4
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-15 86.7 99 38.4
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.8e-15 86.3 104 39.4
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-15 84.7 114 34.2
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 1.1e-14 83.6 104 38.5
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-14 82.8 110 35.5
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 3.3e-14 82.0 104 39.4
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 9.7e-14 80.5 109 33.9
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 3.7e-13 78.6 104 37.5
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 8.2e-13 77.4 122 33.6
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 8.2e-13 77.4 122 34.4
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.1e-12 75.1 93 39.8
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 4.1e-12 75.1 89 42.7
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 5.3e-12 74.7 107 34.6
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.1e-12 73.9 109 36.7
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.1e-12 73.9 109 36.7
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.1e-12 73.9 108 33.3
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.6e-11 72.4 93 37.6
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.4e-11 72.0 105 35.2
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 3.4e-11 72.0 108 36.1
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 4.5e-11 71.6 107 36.4
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.3e-10 70.1 112 38.4
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-10 69.7 113 35.4
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 1.7e-10 69.7 93 41.9
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 2.9e-10 68.9 127 33.1
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.8e-10 68.6 102 32.4
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 5.0e-10 68.2 127 33.1
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 6.5e-10 67.8 106 34.0
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 1.1e-09 67.0 106 34.0
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 1.1e-09 67.0 110 33.6
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-09 66.2 112 33.0
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 2.5e-09 65.9 95 35.8
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.2e-09 65.5 91 36.3
Thecc.07G108700 Theobroma cacao HOM05D002599 ORTHO05D001895 7.2e-09 64.3 115 33.0
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 9.4e-09 63.9 105 31.4
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 9.4e-09 63.9 126 31.0
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.2e-08 63.5 113 34.5
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 3.6e-08 62.0 111 33.3
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 3.6e-08 62.0 111 33.3
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.7e-08 61.6 109 32.1
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.9e-08 60.8 107 29.9
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.9e-08 60.8 107 29.9
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.9e-08 60.8 107 29.9
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 7.9e-08 60.8 89 32.6
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 7.9e-08 60.8 108 30.6
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.0e-07 60.5 107 29.9
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 1.4e-07 60.1 103 31.1
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 1.4e-07 60.1 103 31.1
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 1.4e-07 60.1 111 31.5
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-07 59.3 89 31.5
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.0e-07 58.9 109 32.1
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.0e-07 58.9 109 32.1
Sabra07G0096700 Salix brachista HOM05D008886 ORTHO05D001895 3.0e-07 58.9 91 34.1
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.0e-07 58.9 107 29.9
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 3.9e-07 58.5 110 33.6
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 5.1e-07 58.2 83 34.9
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.7e-07 57.8 109 31.2
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 6.7e-07 57.8 90 31.1
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-07 57.8 107 30.8
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 8.8e-07 57.4 79 36.7
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 8.8e-07 57.4 107 31.8
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 8.8e-07 57.4 107 29.9
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-06 57.0 107 29.0
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 1.5e-06 56.6 95 30.5
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-06 56.6 109 31.2
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-06 56.6 112 31.2
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 1.5e-06 56.6 110 33.6
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 2.0e-06 56.2 107 29.9
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 3.3e-06 55.5 110 23.6
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 3.3e-06 55.5 116 31.0
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 5.7e-06 54.7 102 29.4
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.4e-06 54.3 112 30.4


User provided reference genes

Program Settings