Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-66 255.8 123 100.0
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.9e-60 235.7 123 91.9
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.7e-51 205.3 121 81.8
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.1e-31 138.7 114 55.3
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.0e-31 138.3 114 57.0
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-30 136.3 114 57.0
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-30 136.3 114 57.0
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-30 136.3 114 57.0
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-30 135.2 114 55.3
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 4.5e-30 134.8 114 55.3
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 5.8e-30 134.4 114 56.1
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.6e-30 134.0 114 54.4
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 7.6e-30 134.0 114 56.1
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.3e-29 133.3 114 52.6
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-29 132.5 114 55.3
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-29 132.1 114 54.4
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-29 132.1 114 54.4
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-28 130.2 114 52.6
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 5.5e-28 127.9 102 58.8
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 5.5e-28 127.9 102 58.8
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-26 123.6 103 56.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 3.7e-16 88.6 120 41.7
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 5.3e-15 84.7 105 41.0
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 9.1e-15 84.0 119 40.3
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 7.7e-14 80.9 118 38.1
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.0e-13 80.5 113 40.7
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 1.7e-13 79.7 117 37.6
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.2e-13 79.3 119 37.0
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-13 79.0 113 39.8
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.8e-13 78.6 104 39.4
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.5e-13 77.8 113 38.1
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-12 75.1 108 39.8
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-11 73.6 113 37.2
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 2.7e-11 72.4 118 36.4
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 7.9e-11 70.9 110 36.4
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 1.8e-10 69.7 126 34.1
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 1.8e-10 69.7 106 36.8
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 3.9e-10 68.6 126 34.1
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 3.9e-10 68.6 114 36.8
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 6.7e-10 67.8 106 32.1
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 1.1e-09 67.0 117 31.6
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-09 66.6 87 41.4
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-09 65.5 105 34.3
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.7e-09 63.9 109 31.2
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-08 63.2 109 30.3
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 2.2e-08 62.8 115 30.4
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.2e-08 62.8 101 34.7
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.8e-08 62.4 109 30.3
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 2.8e-08 62.4 113 33.6
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 2.8e-08 62.4 106 32.1
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-08 61.6 84 38.1
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 6.3e-08 61.2 110 32.7
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 6.3e-08 61.2 84 36.9
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 8.2e-08 60.8 80 41.2
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.4e-07 60.1 80 37.5
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-07 59.7 84 36.9
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-07 59.3 87 37.9
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 3.1e-07 58.9 100 33.0
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 3.1e-07 58.9 100 33.0
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-07 58.9 107 29.9
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.1e-07 58.9 107 29.9
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-07 58.9 87 37.9
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 3.1e-07 58.9 84 36.9
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.1e-07 58.5 83 38.6
Atru.chr3.612 Acer truncatum HOM05D002599 ORTHO05D001895 7.0e-07 57.8 113 28.3
Sabra15G0012600 Salix brachista HOM05D002599 ORTHO05D001895 9.1e-07 57.4 79 36.7
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 2.0e-06 56.2 127 28.3
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 3.4e-06 55.5 90 33.3
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 5.9e-06 54.7 96 33.3


User provided reference genes

Program Settings