Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 7.8e-67 256.9 123 100.0
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.9e-60 235.7 123 91.9
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.4e-52 208.8 121 83.5
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.3e-31 137.9 115 56.5
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 9.0e-31 137.1 114 57.9
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 9.0e-31 137.1 114 57.9
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 9.0e-31 137.1 114 57.9
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.0e-30 136.0 113 56.6
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-30 136.0 114 56.1
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 2.6e-30 135.6 114 57.0
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 2.6e-30 135.6 114 56.1
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 4.5e-30 134.8 114 57.0
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.0e-29 133.7 113 54.0
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 2.9e-29 132.1 114 55.3
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 3.8e-29 131.7 114 54.4
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 3.8e-29 131.7 114 54.4
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.9e-29 131.3 113 54.9
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 6.5e-29 131.0 114 53.5
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 2.5e-28 129.0 102 59.8
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 2.5e-28 129.0 102 59.8
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 4.6e-27 124.8 103 57.3
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-16 89.4 120 43.3
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 5.9e-14 81.3 119 41.2
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 7.7e-14 80.9 120 41.7
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 7.7e-14 80.9 105 41.0
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 3.8e-13 78.6 118 38.1
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-12 77.0 117 37.6
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.9e-12 76.3 119 37.0
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 5.5e-12 74.7 118 37.3
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-11 73.6 113 38.1
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 4.7e-11 71.6 88 44.3
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.3e-10 69.3 113 35.4
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-10 69.3 113 36.3
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-10 69.3 88 40.9
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 2.3e-10 69.3 88 42.0
Potri.004G219900 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.7e-10 67.8 107 35.5
Potri.003G010700 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-09 66.6 87 41.4
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-09 66.6 88 40.9
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 2.0e-09 66.2 108 36.1
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.3e-09 65.5 92 37.0
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 3.3e-09 65.5 110 34.5
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.4e-09 65.1 109 31.2
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 4.4e-09 65.1 123 33.3
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.4e-09 64.3 109 30.3
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.3e-08 63.5 125 31.2
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 1.3e-08 63.5 126 31.7
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.7e-08 63.2 109 30.3
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-08 63.2 105 35.2
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 2.8e-08 62.4 126 31.0
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 3.7e-08 62.0 114 34.2
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 1.4e-07 60.1 125 32.8
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 1.8e-07 59.7 115 31.3
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-07 59.7 110 31.8
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 1.8e-07 59.7 126 31.0
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-07 59.7 84 36.9
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 2.4e-07 59.3 124 29.8
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.4e-07 59.3 80 40.0
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 7.0e-07 57.8 103 32.0
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 7.0e-07 57.8 116 36.2
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-06 57.0 87 35.6
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-06 57.0 113 31.9
Potri.003G011066 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-06 56.6 87 36.8
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 2.0e-06 56.2 106 28.3
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 2.6e-06 55.8 126 28.6
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 7.7e-06 54.3 90 34.4


User provided reference genes

Program Settings