Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.1e-65 253.1 119 100.0
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.2e-59 233.0 119 92.4
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.2e-56 223.0 119 87.4
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-52 209.9 119 81.5
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-52 209.5 119 82.4
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-52 208.4 119 80.7
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 3.1e-52 208.4 119 81.5
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 4.0e-52 208.0 118 80.5
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 9.0e-52 206.8 118 81.4
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 9.0e-52 206.8 118 81.4
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-51 204.9 118 80.5
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-51 204.9 119 80.7
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 7.6e-51 203.8 117 80.3
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.9e-50 201.8 117 77.8
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 1.9e-49 199.1 117 77.8
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-46 187.6 114 77.2
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 5.6e-46 187.6 114 77.2
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 2.0e-43 179.1 108 77.8
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.3e-30 134.8 114 54.4
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.1e-29 132.5 113 54.9
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.1e-25 120.2 102 55.9
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.8e-21 104.8 113 48.7
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.7e-18 96.3 111 45.0
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 3.8e-18 95.1 120 43.3
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 4.2e-17 91.7 120 43.3
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 2.7e-16 89.0 116 44.0
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-15 87.0 99 39.4
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 2.3e-15 85.9 123 39.0
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.3e-15 85.9 104 41.3
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 3.0e-15 85.5 114 36.0
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 3.9e-15 85.1 123 39.8
Sabra09G0045600 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-14 83.6 110 36.4
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 1.5e-14 83.2 104 40.4
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-14 83.2 104 42.3
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.5e-14 82.4 114 35.1
Potri.003G016733 Populus trichocarpa HOM05D009888 ORTHO05D001895 7.4e-14 80.9 92 41.3
Potri.003G013026 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.8e-13 79.0 92 40.2
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-13 78.2 104 39.4
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 6.3e-13 77.8 100 41.0
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.3e-13 77.8 100 41.0
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 6.3e-13 77.8 92 41.3
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-12 77.0 108 38.0
Potri.003G011875 Populus trichocarpa HOM05D009888 ORTHO05D001895 1.4e-12 76.6 90 41.1
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 3.1e-12 75.5 106 39.6
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.1e-12 75.1 107 37.4
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 5.3e-12 74.7 106 39.6
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 6.9e-12 74.3 107 38.3
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 1.2e-11 73.6 100 41.0
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.4e-11 72.0 107 40.2
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 3.4e-11 72.0 93 40.9
Potri.004G219450 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.7e-11 70.9 106 34.9
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 7.7e-11 70.9 95 40.0
Gohir.A01G056400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.2e-10 69.3 108 37.0
COL.COLO4_17587 Corchorus olitorius HOM05D009888 ORTHO05D001895 2.9e-10 68.9 113 32.7
Gohir.D01G190550 Gossypium hirsutum HOM05D002599 ORTHO05D025152 2.9e-10 68.9 111 37.8
Gorai.002G234300 Gossypium raimondii HOM05D002599 ORTHO05D025152 2.9e-10 68.9 111 37.8
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 2.9e-10 68.9 110 36.4
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.8e-10 68.6 113 37.2
Sabra03G0006600 Salix brachista HOM05D009888 ORTHO05D001895 6.5e-10 67.8 125 32.0
Potri.004G010850 Populus trichocarpa HOM05D008886 ORTHO05D001895 8.5e-10 67.4 102 34.3
Gohir.A01G200500 Gossypium hirsutum HOM05D002599 ORTHO05D025152 1.4e-09 66.6 111 36.0
Manes.10G121200 Manihot esculenta HOM05D009888 ORTHO05D001895 1.4e-09 66.6 84 41.7
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 1.4e-09 66.6 110 34.5
COL.COLO4_17588 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.9e-09 66.2 117 31.6
Potri.003G014750 Populus trichocarpa HOM05D009888 ORTHO05D001895 3.2e-09 65.5 90 35.6
Potri.003G011132 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-09 65.1 111 35.1
Manes.02G167801 Manihot esculenta HOM05D009888 ORTHO05D001895 5.5e-09 64.7 93 38.7
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.2e-09 64.3 101 34.7
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.2e-09 64.3 79 36.7
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.4e-09 63.9 108 34.3
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.4e-09 63.9 108 34.3
Gohir.A01G056300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.2e-08 63.5 108 34.3
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.6e-08 63.2 107 32.7
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 1.6e-08 63.2 89 36.0
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.1e-08 62.8 101 34.7
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.1e-08 62.8 101 34.7
Potri.003G013601 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.7e-08 62.4 78 38.5
Thecc.07G108300 Theobroma cacao HOM05D009888 ORTHO05D001895 2.7e-08 62.4 106 32.1
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.6e-08 62.0 107 32.7
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.6e-08 62.0 107 32.7
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.6e-08 62.0 107 32.7
Sabra03G0006900 Salix brachista HOM05D009888 ORTHO05D001895 4.7e-08 61.6 103 34.0
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 6.1e-08 61.2 103 33.0
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 6.1e-08 61.2 103 33.0
Thecc.07G108700 Theobroma cacao HOM05D002599 ORTHO05D001895 6.1e-08 61.2 115 32.2
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 6.1e-08 61.2 107 32.7
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 1.0e-07 60.5 89 34.8
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 1.4e-07 60.1 107 31.8
Sabra07G0096700 Salix brachista HOM05D008886 ORTHO05D001895 1.4e-07 60.1 95 37.9
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 1.4e-07 60.1 106 34.0
Thecc.07G108400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.3e-07 59.3 113 32.7
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 3.9e-07 58.5 107 31.8
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-07 58.5 106 32.1
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 3.9e-07 58.5 106 34.0
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 5.1e-07 58.2 89 33.7
Gorai.002G215500 Gossypium raimondii HOM05D002599 ORTHO05D001895 6.7e-07 57.8 112 33.0
Thecc.02G091000 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-07 57.8 106 33.0
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-06 57.0 106 32.1
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 1.5e-06 56.6 93 34.4
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.6e-06 55.8 105 33.3
Gohir.A01G182500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-06 55.8 112 32.1
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 2.6e-06 55.8 116 31.9
Sabra11G0003900 Salix brachista HOM05D008886 ORTHO05D001895 2.6e-06 55.8 63 39.7
Manes.10G122700 Manihot esculenta HOM05D002599 ORTHO05D001895 3.3e-06 55.5 108 31.5
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 3.3e-06 55.5 102 35.3
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 4.4e-06 55.1 85 32.9
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 5.7e-06 54.7 93 34.4
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 9.7e-06 53.9 110 24.5


User provided reference genes

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