Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G004900 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.3e-65 251.1 123 100.0
Potri.011G005400 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.2e-52 208.0 121 83.5
Potri.011G005500 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.6e-51 204.5 121 81.8
Potri.004G011000 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.9e-25 119.4 115 51.3
Potri.011G005601 Populus trichocarpa HOM05D008886 ORTHO05D001895 3.3e-25 118.6 102 55.9
Potri.011G005300 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.3e-25 118.2 102 55.9
Sabra11G0005500 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-24 116.7 103 54.4
Sabra11G0004200 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-24 115.9 114 51.8
Sabra11G0004900 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-24 115.9 114 51.8
Sabra11G0005300 Salix brachista HOM05D008886 ORTHO05D001895 2.2e-24 115.9 114 51.8
Potri.011G006050 Populus trichocarpa HOM05D008886 ORTHO05D001895 2.8e-24 115.5 114 48.2
Sabra11G0004300 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-24 114.8 117 49.6
Sabra11G0005100 Salix brachista HOM05D008886 ORTHO05D001895 4.8e-24 114.8 114 50.0
Sabra11G0004400 Salix brachista HOM05D008886 ORTHO05D001895 6.3e-24 114.4 114 50.0
Sabra11G0004000 Salix brachista HOM05D008886 ORTHO05D001895 8.2e-24 114.0 114 49.1
Sabra11G0004600 Salix brachista HOM05D008886 ORTHO05D001895 8.2e-24 114.0 114 49.1
Sabra11G0004100 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-23 113.6 114 50.0
Sabra11G0004500 Salix brachista HOM05D008886 ORTHO05D001895 1.1e-23 113.6 114 50.9
Sabra11G0004700 Salix brachista HOM05D008886 ORTHO05D001895 2.4e-23 112.5 102 53.9
Sabra11G0005000 Salix brachista HOM05D008886 ORTHO05D001895 2.4e-23 112.5 102 53.9
Sabra11G0005400 Salix brachista HOM05D008886 ORTHO05D001895 2.4e-23 112.5 114 48.2
Potri.004G221600 Populus trichocarpa HOM05D008886 ORTHO05D001895 4.1e-15 85.1 119 41.2
Sabra01G0167100 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-14 83.6 120 41.7
Potri.011G005200 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.5e-14 83.2 119 39.5
Sabra01G0167200 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-14 82.0 105 41.9
Sabra01G0167700 Salix brachista HOM05D008886 ORTHO05D001895 3.4e-14 82.0 117 37.6
Potri.004G221300 Populus trichocarpa HOM05D008886 ORTHO05D001895 1.0e-13 80.5 113 40.7
Sabra07G0096900 Salix brachista HOM05D008886 ORTHO05D001895 6.5e-13 77.8 113 40.7
Manes.07G020600 Manihot esculenta HOM05D008886 ORTHO05D001895 1.9e-12 76.3 123 35.8
Sabra07G0096300 Salix brachista HOM05D001043 ORTHO05D001895 1.2e-11 73.6 110 39.1
Sabra07G0096500 Salix brachista HOM05D008886 ORTHO05D001895 1.2e-11 73.6 113 38.1
Potri.015G126301 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.6e-11 73.2 104 38.5
Potri.007G119400 Populus trichocarpa HOM05D008886 ORTHO05D001895 6.1e-11 71.2 113 37.2
Sabra01G0167000 Salix brachista HOM05D008353 ORTHO05D001895 6.1e-11 71.2 88 43.2
Sabra03G0007700 Salix brachista HOM05D009888 ORTHO05D001895 6.1e-11 71.2 127 33.1
Sabra07G0097000 Salix brachista HOM05D000527 ORTHO05D017379 1.4e-10 70.1 114 37.7
Potri.003G021250 Populus trichocarpa HOM05D009888 ORTHO05D001895 2.3e-10 69.3 129 31.0
Sabra07G0096600 Salix brachista HOM05D000527 ORTHO05D017379 3.0e-10 68.9 106 37.7
Manes.07G021100 Manihot esculenta HOM05D008886 ORTHO05D001895 6.7e-10 67.8 123 34.1
Sabra03G0007500 Salix brachista HOM05D009888 ORTHO05D001895 6.7e-10 67.8 130 30.8
Thecc.02G091100 Theobroma cacao HOM05D002599 ORTHO05D001895 6.7e-10 67.8 105 37.1
Sabra16G0267500 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-09 66.6 88 39.8
Sabra16G0269300 Salix brachista HOM05D008886 ORTHO05D001895 1.5e-09 66.6 88 40.9
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.0e-09 66.2 109 32.1
Manes.10G121100 Manihot esculenta HOM05D009888 ORTHO05D001895 2.0e-09 66.2 127 33.9
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.6e-09 65.9 109 32.1
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.3e-09 65.5 109 32.1
Potri.004G220100 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.3e-09 65.5 101 35.6
Sabra01G0166800 Salix brachista HOM05D002599 ORTHO05D001895 5.7e-09 64.7 91 36.3
Sabra03G0007300 Salix brachista HOM05D009888 ORTHO05D001895 9.7e-09 63.9 127 30.7
Sabra01G0167400 Salix brachista HOM05D008886 ORTHO05D001895 1.3e-08 63.5 88 38.6
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 2.2e-08 62.8 100 33.0
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 2.2e-08 62.8 100 33.0
Manes.10G125112 Manihot esculenta HOM05D009888 ORTHO05D001895 2.2e-08 62.8 126 30.2
Sabra03G0007200 Salix brachista HOM05D009888 ORTHO05D001895 2.8e-08 62.4 127 31.5
Sabra03G0007600 Salix brachista HOM05D009888 ORTHO05D001895 3.7e-08 62.0 96 35.4
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 3.7e-08 62.0 110 33.6
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-08 61.6 105 33.3
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-08 61.6 110 33.6
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-08 61.6 110 33.6
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 6.3e-08 61.2 101 32.7
Manes.07G019800 Manihot esculenta HOM05D009888 ORTHO05D001895 8.2e-08 60.8 117 30.8
Thecc.02G027800 Theobroma cacao HOM05D002599 ORTHO05D001895 8.2e-08 60.8 108 30.6
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 1.1e-07 60.5 90 33.3
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 1.4e-07 60.1 116 37.1
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 1.8e-07 59.7 110 32.7
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 3.1e-07 58.9 92 32.6
Atru.chr6.1076 Acer truncatum HOM05D008886 ORTHO05D001895 4.1e-07 58.5 106 28.3
Gohir.D13G034950 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.1e-07 58.5 125 30.4
Manes.07G019700 Manihot esculenta HOM05D009888 ORTHO05D001895 4.1e-07 58.5 103 32.0
Gorai.013G039500 Gossypium raimondii HOM05D002599 ORTHO05D001895 5.3e-07 58.2 125 30.4
COL.COLO4_25714 Corchorus olitorius HOM05D002599 ORTHO05D001895 7.0e-07 57.8 102 32.4
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.1e-07 57.4 104 34.6
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.1e-07 57.4 113 30.1
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.1e-07 57.4 113 30.1
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.1e-07 57.4 113 30.1
Sabra03G0006400 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-06 57.0 113 31.0
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 1.2e-06 57.0 93 35.5
Gohir.A13G036650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-06 56.6 128 29.7
Sabra15G0012600 Salix brachista HOM05D002599 ORTHO05D001895 1.5e-06 56.6 105 32.4
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-06 56.2 102 34.3
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.0e-06 56.2 105 35.2
Sabra03G0006100 Salix brachista HOM05D002599 ORTHO05D001895 2.0e-06 56.2 110 30.0
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-06 55.8 107 29.9
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.6e-06 55.8 107 29.9
Sabra07G0096700 Salix brachista HOM05D008886 ORTHO05D001895 5.9e-06 54.7 91 35.2
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 7.7e-06 54.3 105 33.3


User provided reference genes

Program Settings