Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 5.1e-207 724.2 364 100.0
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 2.9e-194 681.8 364 94.8
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 4.8e-165 584.7 363 80.4
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.8e-164 582.8 364 80.8
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 3.1e-164 582.0 364 78.6
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 1.1e-161 573.5 363 77.1
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 7.2e-161 570.9 362 77.3
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 4.7e-160 568.2 364 76.4
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 1.0e-159 567.0 364 76.9
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 7.5e-158 560.8 364 76.1
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 9.8e-158 560.5 364 76.4
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 1.7e-157 559.7 364 75.5
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 4.8e-157 558.1 362 75.4
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 2.4e-156 555.8 364 75.0
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 2.4e-156 555.8 367 75.7
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 7.0e-156 554.3 361 74.5
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-155 553.5 366 74.3
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.2e-155 553.5 364 75.8
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 3.5e-155 552.0 364 75.3
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.9e-155 551.2 368 74.5
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 5.9e-155 551.2 368 74.5
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 5.9e-155 551.2 364 75.3
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 1.0e-154 550.4 364 75.0
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 1.3e-154 550.1 366 74.3
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 2.3e-154 549.3 366 73.8
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 1.9e-153 546.2 364 75.0
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 1.9e-153 546.2 367 74.4
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 1.9e-153 546.2 367 72.5
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 3.3e-153 545.4 364 73.6
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 3.3e-153 545.4 364 75.3
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 7.2e-153 544.3 364 73.9
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 2.1e-152 542.7 365 74.8
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 2.8e-152 542.3 361 73.4
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 4.7e-152 541.6 362 71.8
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 3.4e-150 535.4 364 71.4
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 7.5e-150 534.3 358 76.5
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 2.8e-149 532.3 360 71.7
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 4.9e-149 531.6 364 70.9
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 6.3e-149 531.2 367 72.5
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 1.8e-148 529.6 366 72.4
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 3.1e-148 528.9 360 70.6
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 4.1e-148 528.5 358 72.9
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 1.6e-147 526.6 362 70.2
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 2.0e-147 526.2 358 74.0
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 3.5e-147 525.4 358 74.9
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 4.5e-147 525.0 367 71.4
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 5.9e-147 524.6 358 74.3
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 5.9e-147 524.6 361 71.7
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 7.8e-147 524.2 367 72.2
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.0e-146 523.9 358 72.3
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.9e-146 522.3 328 77.7
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 2.9e-146 522.3 364 71.7
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 8.6e-146 520.8 355 73.0
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 8.6e-146 520.8 356 71.3
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 1.1e-145 520.4 358 72.9
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 2.5e-145 519.2 358 71.8
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 2.5e-145 519.2 358 71.8
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 2.5e-145 519.2 362 72.1
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 2.5e-145 519.2 381 69.3
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 9.5e-145 517.3 359 72.7
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 9.5e-145 517.3 365 72.1
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 1.6e-144 516.5 339 77.6
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 1.6e-144 516.5 365 69.9
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 2.8e-144 515.8 360 70.8
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 8.0e-144 514.2 362 69.9
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 8.0e-144 514.2 364 71.2
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.4e-143 513.5 348 73.9
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 1.8e-143 513.1 381 69.0
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 2.3e-143 512.7 364 69.8
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 2.3e-143 512.7 362 70.2
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 3.1e-143 512.3 358 70.9
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 4.0e-143 511.9 346 72.8
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 2.0e-142 509.6 364 69.8
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 2.0e-142 509.6 364 70.6
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 2.6e-142 509.2 360 70.0
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 7.5e-142 507.7 365 69.0
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 4.9e-141 505.0 358 70.4
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 8.3e-141 504.2 315 78.7
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 2.4e-140 502.7 340 74.1
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 7.0e-140 501.1 370 68.9
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 3.5e-139 498.8 439 60.4
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 7.8e-139 497.7 352 70.2
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 3.9e-138 495.4 369 69.9
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 1.9e-137 493.0 360 68.3
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.9e-137 493.0 365 68.5
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 3.6e-136 488.8 365 67.7
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 1.8e-135 486.5 335 73.1
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 5.2e-135 485.0 339 71.7
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 1.2e-134 483.8 361 68.7
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 3.4e-134 482.3 364 66.5
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 2.2e-133 479.6 324 72.8
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 8.3e-133 477.6 365 66.3
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 8.3e-133 477.6 360 64.2
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 4.6e-131 471.9 360 63.3
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 8.6e-130 467.6 407 61.7
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.5e-129 466.1 423 59.1
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.3e-129 465.7 360 63.1
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 1.8e-127 459.9 313 73.5
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.6e-123 446.8 349 62.2
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 1.0e-122 444.1 289 75.4
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 1.3e-122 443.7 287 75.6
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 2.4e-119 433.0 274 77.4
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 1.2e-118 430.6 274 77.4
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 6.0e-115 418.3 288 72.6
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 8.7e-114 414.5 303 71.6
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 2.0e-110 403.3 313 63.6
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 4.4e-110 402.1 360 57.5
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 2.4e-100 369.8 351 55.6
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 2.1e-99 366.7 352 54.3
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.3e-98 364.0 328 59.8
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 9.6e-97 357.8 268 67.5
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 1.4e-95 354.0 258 69.0
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 9.0e-95 351.3 268 66.8
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 5.1e-82 308.9 312 50.3
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 6.7e-82 308.5 356 47.2
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 4.8e-72 275.8 363 46.8
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 5.9e-70 268.9 441 37.6
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 8.5e-61 238.4 175 70.3
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 3.2e-60 236.5 271 51.7
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 4.7e-59 232.6 354 39.5
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.1e-59 232.3 363 39.9
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 2.8e-56 223.4 240 54.6
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 9.1e-55 218.4 210 57.6
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 9.4e-52 208.4 180 63.3
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 8.0e-51 205.3 180 62.2
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.8e-47 194.1 244 49.2
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 3.8e-37 159.8 113 67.3
CANSAT56G0563 Cannabis sativa HOM05D005739 ORTHO05D113818 1.8e-26 124.4 118 58.5
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 4.9e-24 116.3 204 40.2
RcHm_v2.0_Chr5g0051251 Rosa chinensis HOM05D005739 ORTHO05D033954 4.0e-18 96.7 70 64.3
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 7.5e-17 92.4 49 85.7
SEGI_28449 Sequoiadendron giganteum HOM05D005739 ORTHO05D033954 3.0e-13 80.5 62 56.5
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 6.2e-11 72.8 199 27.1
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 4.0e-10 70.1 88 44.3
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 3.4e-09 67.0 35 85.7
arahy.Tifrunner.gnm1.ann1.3Y4VDA Arachis hypogaea HOM05D000187 ORTHO05D000230 4.6e-06 56.6 26 88.5


User provided reference genes

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