Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 7.6e-77 290.4 146 100.0
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 1.6e-71 272.7 146 95.2
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 2.3e-57 225.7 158 75.3
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 1.4e-54 216.5 159 71.1
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 3.4e-53 211.8 154 69.5
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 5.8e-53 211.1 157 72.0
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 8.4e-52 207.2 149 70.5
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 1.1e-51 206.8 160 66.9
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 1.9e-51 206.1 148 70.9
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 4.2e-51 204.9 151 70.9
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 4.2e-51 204.9 157 68.2
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 7.1e-51 204.1 150 72.7
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 6.0e-50 201.1 160 65.6
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 6.0e-50 201.1 155 69.0
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 1.3e-49 199.9 148 69.6
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 1.3e-49 199.9 147 69.4
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 2.3e-49 199.1 158 65.8
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 3.0e-49 198.7 144 66.7
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 3.0e-49 198.7 162 67.3
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 3.0e-49 198.7 150 70.0
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 3.9e-49 198.4 159 67.9
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 1.1e-48 196.8 155 67.1
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 1.5e-48 196.4 149 67.8
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 2.5e-48 195.7 154 68.2
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 5.6e-48 194.5 160 63.8
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 9.6e-48 193.7 148 67.6
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 3.7e-47 191.8 126 77.8
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 3.7e-47 191.8 155 65.2
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 8.2e-47 190.7 148 69.6
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.1e-46 190.3 146 66.4
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 1.1e-46 190.3 146 67.8
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 1.4e-46 189.9 123 76.4
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 1.4e-46 189.9 147 69.4
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 1.8e-46 189.5 148 64.2
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.4e-46 189.1 148 66.9
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 5.3e-46 188.0 146 65.8
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 6.9e-46 187.6 146 66.4
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 9.0e-46 187.2 123 76.4
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.2e-45 186.8 152 65.8
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 1.5e-45 186.4 158 66.5
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 2.6e-45 185.7 153 65.4
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 3.4e-45 185.3 158 64.6
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 5.8e-45 184.5 152 64.5
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 7.6e-45 184.1 161 62.1
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 7.6e-45 184.1 152 67.1
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 7.6e-45 184.1 125 72.8
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 7.6e-45 184.1 147 63.9
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 1.3e-44 183.3 144 68.8
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 1.3e-44 183.3 146 64.4
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 1.7e-44 183.0 147 65.3
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 6.5e-44 181.0 126 72.2
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 1.1e-43 180.3 158 60.1
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 1.4e-43 179.9 143 63.6
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 5.5e-43 177.9 159 61.0
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 7.1e-43 177.6 118 73.7
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 7.1e-43 177.6 136 64.7
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 1.2e-42 176.8 169 58.6
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 1.2e-42 176.8 150 62.0
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.6e-42 176.4 132 68.2
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 2.1e-42 176.0 143 63.6
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 2.1e-42 176.0 154 61.7
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 2.1e-42 176.0 154 61.7
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 2.7e-42 175.6 124 72.6
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 2.7e-42 175.6 148 61.5
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 3.5e-42 175.3 126 69.0
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 6.0e-42 174.5 146 61.0
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 7.9e-42 174.1 149 63.8
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 1.0e-41 173.7 121 71.1
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 1.8e-41 172.9 143 60.8
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 1.8e-41 172.9 143 60.8
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 6.7e-41 171.0 155 60.6
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 6.7e-41 171.0 122 72.1
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 8.7e-41 170.6 140 60.7
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 8.7e-41 170.6 122 71.3
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 1.5e-40 169.9 147 59.2
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 3.3e-40 168.7 145 59.3
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 7.4e-40 167.5 152 62.5
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 7.4e-40 167.5 122 69.7
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 9.7e-40 167.2 150 54.7
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 1.3e-39 166.8 129 67.4
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 1.3e-39 166.8 129 67.4
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 2.8e-39 165.6 147 59.2
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 3.7e-39 165.2 129 66.7
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 3.7e-39 165.2 129 66.7
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 8.2e-39 164.1 105 71.4
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 1.4e-38 163.3 148 60.8
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 1.5e-37 159.8 121 63.6
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 4.5e-37 158.3 103 75.7
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 1.0e-36 157.1 142 56.3
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 9.4e-35 150.6 119 62.2
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 1.6e-34 149.8 149 54.4
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 2.1e-34 149.4 99 72.7
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 7.9e-34 147.5 104 69.2
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 1.0e-33 147.1 142 54.9
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 1.8e-33 146.4 118 61.0
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 2.3e-33 146.0 87 80.5
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 1.9e-32 142.9 116 62.9
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 5.7e-32 141.4 103 68.0
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 4.8e-31 138.3 108 63.9
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 4.1e-30 135.2 101 62.4
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 5.3e-30 134.8 124 55.6
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 7.7e-29 131.0 100 62.0
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.3e-23 113.6 122 50.8
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.2e-21 107.1 74 66.2
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 1.0e-20 104.0 87 63.2
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 5.5e-19 98.2 98 44.9
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 5.9e-13 78.2 67 53.7
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 2.9e-12 75.9 59 59.3
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 5.5e-11 71.6 88 40.9
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 9.4e-11 70.9 100 38.0
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 3.0e-09 65.9 69 33.3


User provided reference genes

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