Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G254100 Populus trichocarpa HOM05D007364 ORTHO05D009275 2.9e-76 288.5 149 100.0
Manes.14G008700 Manihot esculenta HOM05D007364 ORTHO05D009275 1.3e-52 209.9 145 72.4
Gohir.A05G115400 Gossypium hirsutum HOM05D007364 ORTHO05D009275 2.6e-48 195.7 146 70.5
Gohir.D05G115800 Gossypium hirsutum HOM05D007364 ORTHO05D009275 9.8e-48 193.7 146 69.9
Gorai.009G119800 Gossypium raimondii HOM05D007364 ORTHO05D009275 2.9e-47 192.2 146 69.2
Thecc.06G054700 Theobroma cacao HOM05D007364 ORTHO05D009275 7.0e-46 187.6 144 66.7
Duzib235G1177 Durio zibethinus HOM05D007364 ORTHO05D009275 2.0e-45 186.0 148 67.6
Atru.chr1.2614 Acer truncatum HOM05D007364 ORTHO05D009275 1.7e-44 183.0 147 61.9
Ciclev10013953m.g Citrus clementina HOM05D007364 ORTHO05D009275 1.6e-42 176.4 146 61.6
Cfa003431 Carpinus fangiana HOM05D007364 ORTHO05D009275 1.8e-41 172.9 140 63.6
Haze_16200 Corylus avellana HOM05D007364 ORTHO05D009275 4.0e-41 171.8 140 62.1
arahy.Tifrunner.gnm1.ann1.TFQ65X Arachis hypogaea HOM05D007364 ORTHO05D009275 1.5e-40 169.9 140 62.1
arahy.Tifrunner.gnm1.ann1.A7U39C Arachis hypogaea HOM05D007364 ORTHO05D009275 3.4e-40 168.7 140 61.4
THA.LOC104812333 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 1.1e-38 163.7 151 57.0
RcHm_v2.0_Chr2g0149211 Rosa chinensis HOM05D007364 ORTHO05D009275 3.2e-38 162.2 145 60.0
FvH4_6g36820 Fragaria vesca HOM05D007364 ORTHO05D009275 1.6e-37 159.8 142 57.7
FAN02G1908 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.6e-37 159.8 142 57.7
FAN14G5026 Fragaria x ananassa HOM05D007364 ORTHO05D009275 1.6e-37 159.8 142 57.7
FAN05G2474 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.1e-37 159.5 140 58.6
Prupe.3G024300 Prunus persica HOM05D007364 ORTHO05D009275 2.1e-37 159.5 138 60.9
ClCG07G014710 Citrullus lanatus HOM05D007364 ORTHO05D009275 2.7e-37 159.1 145 57.2
QL05p088447 Quercus lobata HOM05D007364 ORTHO05D009275 2.7e-37 159.1 140 61.4
MELO3C010416.2 Cucumis melo HOM05D007364 ORTHO05D009275 3.5e-37 158.7 139 59.0
TAR636G2112 Trochodendron aralioides HOM05D007364 ORTHO05D009275 4.6e-37 158.3 144 56.2
Aa31LG7G1240 Aethionema arabicum HOM05D007364 ORTHO05D009275 6.0e-37 157.9 152 56.6
AUR62001324 Chenopodium quinoa HOM05D007364 ORTHO05D009275 6.0e-37 157.9 151 57.6
Lj4g0012611 Lotus japonicus HOM05D007364 ORTHO05D009275 6.0e-37 157.9 141 58.9
Ah.15g094280 Amaranthus hybridus HOM05D007364 ORTHO05D009275 1.0e-36 157.1 147 54.4
TAR625G0136 Trochodendron aralioides HOM05D007364 ORTHO05D009275 1.0e-36 157.1 140 57.9
TWI38G2254 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 1.3e-36 156.8 159 54.7
AUR62025707 Chenopodium quinoa HOM05D007364 ORTHO05D009275 2.3e-36 156.0 151 57.0
Ca_17791_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.3e-36 156.0 140 55.0
Ca_29552_v3 Cicer arietinum L. HOM05D007364 ORTHO05D009275 2.3e-36 156.0 140 55.0
AT1G16790 Arabidopsis thaliana HOM05D007364 ORTHO05D009275 3.9e-36 155.2 146 58.2
TWI63G0101 Tripterygium wilfordii HOM05D007364 ORTHO05D009275 3.9e-36 155.2 155 55.5
BcaC07g38817 Brassica carinata HOM05D007364 ORTHO05D009275 5.1e-36 154.8 151 57.0
CARHR017250 Cardamine hirsuta HOM05D007364 ORTHO05D009275 1.1e-35 153.7 146 56.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 1.5e-35 153.3 152 55.9
Carub.0001s1652 Capsella rubella HOM05D007364 ORTHO05D009275 1.5e-35 153.3 145 57.2
Thhalv10009015m.g Eutrema salsugineum HOM05D007364 ORTHO05D009275 2.5e-35 152.5 150 54.7
AL1G28960 Arabidopsis lyrata HOM05D007364 ORTHO05D009275 3.3e-35 152.1 146 56.8
MBI16_g18204_MAGBIO Magnolia biondii HOM05D007364 ORTHO05D009275 7.3e-35 151.0 139 54.0
Psat7g058640 Pisum sativum HOM05D007364 ORTHO05D009275 7.3e-35 151.0 140 55.7
Glyma.05G173100 Glycine max HOM05D007364 ORTHO05D009275 2.1e-34 149.4 135 57.8
Sp1g14930 Schrenkiella parvula HOM05D007364 ORTHO05D009275 2.8e-34 149.1 150 55.3
Glyma.08G130400 Glycine max HOM05D007364 ORTHO05D009275 4.7e-34 148.3 135 57.8
MD09G1166600 Malus domestica HOM05D007364 ORTHO05D009275 8.1e-34 147.5 138 56.5
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.1e-33 147.1 153 52.9
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 5.2e-33 144.8 153 51.6
Aqoxy5G03758 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 8.9e-33 144.1 115 60.0
BcaB03g13030 Brassica carinata HOM05D007364 ORTHO05D009275 1.5e-32 143.3 151 52.3
Sc15g0001160 Simmondsia chinensis HOM05D000912 ORTHO05D008392 2.0e-32 142.9 145 52.4
TPR.G6288 Trifolium pratense HOM05D007364 ORTHO05D009275 2.0e-32 142.9 140 52.1
FAN09G0058 Fragaria x ananassa HOM05D007364 ORTHO05D009275 2.6e-32 142.5 127 58.3
A06p12720 Brassica napus HOM05D007364 ORTHO05D009275 5.8e-32 141.4 152 52.0
BraA06t24432Z Brassica rapa HOM05D007364 ORTHO05D009275 7.6e-32 141.0 152 52.0
EL10Ac7g18129 Beta vulgaris HOM05D007364 ORTHO05D009275 1.3e-31 140.2 148 50.0
VMungo0251G1224 Vigna mungo HOM05D007364 ORTHO05D009275 1.3e-31 140.2 134 54.5
C05p15020 Brassica napus HOM05D007364 ORTHO05D009275 2.9e-31 139.0 152 52.6
Lalb_Chr07g0185511 Lupinus albus HOM05D007364 ORTHO05D009275 2.9e-31 139.0 152 50.0
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 3.8e-31 138.7 137 56.9
PGR031G1732 Punica granatum HOM05D007364 ORTHO05D009275 3.8e-31 138.7 143 50.3
BolC5t30217H Brassica oleracea HOM05D007364 ORTHO05D009275 6.4e-31 137.9 152 52.0
COL.COLO4_38285 Corchorus olitorius HOM05D007364 ORTHO05D009275 1.4e-30 136.7 102 65.7
CANSAT78G1269 Cannabis sativa HOM05D007364 ORTHO05D009275 1.9e-30 136.3 120 60.0
Phvul.002G258200 Phaseolus vulgaris HOM05D007364 ORTHO05D009275 2.4e-30 136.0 140 52.1
PSO063G5199 Papaver somniferum HOM05D007364 ORTHO05D009275 2.1e-29 132.9 145 49.0
Sed0001602 Sechium edule HOM05D007364 ORTHO05D009275 1.0e-28 130.6 115 56.5
Eucgr.J03185 Eucalyptus grandis HOM05D007364 ORTHO05D009275 8.7e-28 127.5 140 47.1
CsaV3_4G028750 Cucumis sativus L. HOM05D007364 ORTHO05D009275 5.6e-27 124.8 106 62.3
Nitab4.5_0011805g0010 Nicotiana tabacum HOM05D007364 ORTHO05D009275 9.6e-27 124.0 152 46.1
Hma1.2p1_0191F.1_g083440 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.2e-26 123.6 155 43.9
Hma1.2p1_3076F.1_g332395 Hydrangea macrophylla HOM05D007364 ORTHO05D009275 1.2e-26 123.6 155 43.9
Actinidia21894 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.6e-26 123.2 143 51.7
THA.LOC104808105 Tarenaya hassleriana HOM05D007364 ORTHO05D009275 2.1e-26 122.9 143 49.7
Peaxi162Scf00062g00099 Petunia axillaris HOM05D007364 ORTHO05D009275 2.8e-26 122.5 135 48.1
Cc09_g07400 Coffea canephora HOM05D007364 ORTHO05D009275 1.1e-25 120.6 144 48.6
Aqoxy2G03840 Aquilegia oxysepala HOM05D007364 ORTHO05D009275 2.4e-25 119.4 101 57.4
CAN.G484.12 Capsicum annuum HOM05D007364 ORTHO05D009275 2.4e-25 119.4 140 50.0
PSO170G0377 Papaver somniferum HOM05D007364 ORTHO05D009275 6.9e-25 117.9 144 45.8
PGSC0003DMG400004654 Solanum tuberosum HOM05D007364 ORTHO05D009275 6.9e-25 117.9 137 48.2
Sopen12g034580 Solanum pennellii HOM05D007364 ORTHO05D009275 9.0e-25 117.5 127 49.6
Solyc12g099960.1 Solanum lycopersicum HOM05D007364 ORTHO05D009275 2.0e-24 116.3 121 50.4
BcaC05g25538 Brassica carinata HOM05D007364 ORTHO05D009275 4.4e-24 115.2 118 57.6
Actinidia38815 Actinidia chinensis HOM05D007364 ORTHO05D009275 1.7e-23 113.2 147 47.6
Nitab4.5_0001925g0240 Nicotiana tabacum HOM05D007364 ORTHO05D009275 1.6e-21 106.7 141 44.7
unitig_26.g10058 Utricularia gibba HOM05D007364 ORTHO05D009275 2.7e-21 105.9 145 44.8
CiPaw.01G207600 Carya illinoinensis HOM05D007364 ORTHO05D009275 2.3e-20 102.8 100 57.0
DCAR_001424 Daucus carota HOM05D007364 ORTHO05D009275 5.1e-20 101.7 113 44.2
Lsat_1_v5_gn_4_106261 Lactuca sativa HOM05D007364 ORTHO05D009275 6.6e-20 101.3 125 44.8
Atru.chr2.3597 Acer truncatum HOM05D007364 ORTHO05D009275 1.9e-19 99.8 73 61.6
BcaB02g06675 Brassica carinata HOM05D007364 ORTHO05D009275 1.9e-19 99.8 95 55.8
CiPaw.01G094100 Carya illinoinensis HOM05D007364 ORTHO05D009275 5.6e-19 98.2 89 55.1
LjContig00484g0025496 Lotus japonicus HOM05D007364 ORTHO05D009275 2.8e-18 95.9 101 52.5
SalBow6G2338 Salvia bowleyana HOM05D007364 ORTHO05D009275 2.8e-18 95.9 123 44.7
HPP92_017109 Vanilla planifolia HOM05D007364 ORTHO05D009275 6.2e-18 94.7 154 37.0
HPP92_017099 Vanilla planifolia HOM05D007364 ORTHO05D009275 8.1e-18 94.4 154 37.0
Oeu047568.2 Olea europaea HOM05D007364 ORTHO05D009275 9.0e-17 90.9 119 42.0
Migut.I01209 Erythranthe guttata HOM05D007364 ORTHO05D009275 1.5e-16 90.1 134 37.3
SGA_v2.0_scaffold71G23970 Striga asiatica HOM05D007364 ORTHO05D009275 2.6e-16 89.4 130 36.9
HanXRQChr04g0125291 Helianthus annuus HOM05D007364 ORTHO05D009275 4.5e-16 88.6 126 40.5
Lj9P543T41 Lonicera japonica HOM05D007364 ORTHO05D009275 5.4e-14 81.6 100 42.0
AUR62015398 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.8e-12 76.6 60 56.7
AUR62040375 Chenopodium quinoa HOM05D007364 ORTHO05D009275 1.8e-12 76.6 60 56.7
ECA232G2752 Erigeron canadensis HOM05D007364 ORTHO05D009275 1.5e-11 73.6 93 38.7
SalBow7G1183 Salvia bowleyana HOM05D003223 ORTHO05D004865 4.8e-10 68.6 107 43.0
Mapoly0061s0135 Marchantia polymorpha HOM05D007364 ORTHO05D009275 1.4e-09 67.0 118 30.5
Pp3c19_20210 Physcomitrium patens HOM05D007364 ORTHO05D009275 5.3e-09 65.1 121 32.2
SEGI_24559 Sequoiadendron giganteum HOM05D007364 ORTHO05D009275 2.0e-08 63.2 110 34.5


User provided reference genes

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