Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G250100 Populus trichocarpa HOM05D007092 ORTHO05D008947 3.3e-183 644.8 308 100.0
Sabra10G0194500 Salix brachista HOM05D007092 ORTHO05D008947 5.2e-168 594.3 308 92.9
Manes.01G181400 Manihot esculenta HOM05D007092 ORTHO05D008947 1.8e-104 383.3 322 62.7
QL05p083231 Quercus lobata HOM05D007092 ORTHO05D008947 3.0e-99 365.9 307 60.6
Ciclev10026125m.g Citrus clementina HOM05D007092 ORTHO05D008947 6.7e-99 364.8 305 61.0
Eucgr.F04011 Eucalyptus grandis HOM05D007092 ORTHO05D008947 3.3e-98 362.5 268 66.8
Atru.chr1.2779 Acer truncatum HOM05D007092 ORTHO05D008947 4.8e-97 358.6 255 66.7
GSVIVG01016136001 Vitis vinifera HOM05D007092 ORTHO05D008947 2.6e-95 352.8 291 61.5
Prupe.3G167100 Prunus persica HOM05D007092 ORTHO05D008947 2.9e-94 349.4 323 57.6
MD09G1158700 Malus domestica HOM05D007092 ORTHO05D008947 6.4e-94 348.2 255 65.1
RcHm_v2.0_Chr2g0150121 Rosa chinensis HOM05D007092 ORTHO05D008947 1.1e-93 347.4 317 57.7
Dinv37796 Davidia involucrata HOM05D007092 ORTHO05D008947 1.4e-93 347.1 301 58.5
Thecc.06G015800 Theobroma cacao HOM05D007092 ORTHO05D008947 1.9e-93 346.7 301 58.5
FvH4_6g37290 Fragaria vesca HOM05D007092 ORTHO05D008947 1.2e-92 344.0 254 64.6
CANSAT01G0482 Cannabis sativa HOM05D007092 ORTHO05D008947 1.6e-92 343.6 251 63.3
AL2G32840 Arabidopsis lyrata HOM05D007092 ORTHO05D008947 1.3e-91 340.5 265 62.6
PGR102G2093 Punica granatum HOM05D007092 ORTHO05D008947 3.9e-91 339.0 265 63.0
Hma1.2p1_1104F.1_g257360 Hydrangea macrophylla HOM05D007092 ORTHO05D008947 5.1e-91 338.6 252 63.5
Aa31LG4G3360 Aethionema arabicum HOM05D007092 ORTHO05D008947 3.3e-90 335.9 255 61.2
Carub.0002s1986 Capsella rubella HOM05D007092 ORTHO05D008947 3.3e-90 335.9 265 61.5
Thhalv10018923m.g Eutrema salsugineum HOM05D007092 ORTHO05D008947 3.3e-90 335.9 265 61.5
Sp5g28050 Schrenkiella parvula HOM05D007092 ORTHO05D008947 3.3e-90 335.9 298 56.4
Oeu049655.1 Olea europaea HOM05D007092 ORTHO05D008947 5.6e-90 335.1 260 63.1
VMungo0647G0167 Vigna mungo HOM05D007092 ORTHO05D008947 7.4e-90 334.7 256 62.5
arahy.Tifrunner.gnm1.ann1.2I6Q5Y Arachis hypogaea HOM05D007092 ORTHO05D008947 1.6e-89 333.6 296 56.1
arahy.Tifrunner.gnm1.ann1.U4SUAB Arachis hypogaea HOM05D007092 ORTHO05D008947 1.6e-89 333.6 276 58.7
CsaV3_7G033820 Cucumis sativus L. HOM05D007092 ORTHO05D008947 2.1e-89 333.2 311 55.0
Nitab4.5_0008628g0030 Nicotiana tabacum HOM05D007092 ORTHO05D008947 3.7e-89 332.4 251 63.7
Sopen06g022680 Solanum pennellii HOM05D007092 ORTHO05D008947 4.8e-89 332.0 263 60.5
Solyc06g063230.3 Solanum lycopersicum HOM05D007092 ORTHO05D008947 6.2e-89 331.6 265 60.0
AT1G73090 Arabidopsis thaliana HOM05D007092 ORTHO05D008947 8.2e-89 331.3 254 62.2
BolC2t09103H Brassica oleracea HOM05D007092 ORTHO05D008947 1.1e-88 330.9 270 59.6
Nitab4.5_0002661g0010 Nicotiana tabacum HOM05D007092 ORTHO05D008947 1.8e-88 330.1 250 62.8
A02p18440 Brassica napus HOM05D007092 ORTHO05D008947 2.4e-88 329.7 297 56.2
C02p30520 Brassica napus HOM05D007092 ORTHO05D008947 2.4e-88 329.7 272 59.6
BraA02t06883Z Brassica rapa HOM05D007092 ORTHO05D008947 2.4e-88 329.7 297 56.2
CSS0038887 Camellia sinensis var. sinensis HOM05D007092 ORTHO05D008947 3.1e-88 329.3 311 55.6
Lj3g0013116 Lotus japonicus HOM05D007092 ORTHO05D008947 4.0e-88 328.9 314 52.5
Lalb_Chr04g0264731 Lupinus albus HOM05D007092 ORTHO05D008947 4.0e-88 328.9 250 62.0
PGSC0003DMG400026517 Solanum tuberosum HOM05D007092 ORTHO05D008947 5.3e-88 328.6 265 60.0
Ca_20954_v3 Cicer arietinum L. HOM05D007092 ORTHO05D008947 6.9e-88 328.2 250 62.0
Nn2g12583 Nelumbo nucifera HOM05D007092 ORTHO05D008947 6.9e-88 328.2 261 61.7
Cc04_g00380 Coffea canephora HOM05D007092 ORTHO05D008947 9.0e-88 327.8 301 58.1
CARHR066060 Cardamine hirsuta HOM05D007092 ORTHO05D008947 2.0e-87 326.6 254 61.4
Haze_15817 Corylus avellana HOM05D007092 ORTHO05D008947 2.0e-87 326.6 289 60.9
TPR.G38753 Trifolium pratense HOM05D007092 ORTHO05D008947 2.6e-87 326.2 252 61.1
Migut.I01177 Erythranthe guttata HOM05D007092 ORTHO05D008947 4.5e-87 325.5 246 64.2
FAN02G1258 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.0e-86 324.3 292 56.8
ClCG09G001510 Citrullus lanatus HOM05D007092 ORTHO05D008947 1.3e-86 323.9 277 59.2
Gohir.D10G007300 Gossypium hirsutum HOM05D007092 ORTHO05D008947 1.7e-86 323.6 238 65.5
Lsat_1_v5_gn_5_137421 Lactuca sativa HOM05D007092 ORTHO05D008947 2.2e-86 323.2 250 60.0
Sc12g0010950 Simmondsia chinensis HOM05D007092 ORTHO05D008947 2.9e-86 322.8 274 59.5
Duzib160G0445 Durio zibethinus HOM05D007092 ORTHO05D008947 3.8e-86 322.4 259 61.4
Gorai.011G008000 Gossypium raimondii HOM05D007092 ORTHO05D008947 3.8e-86 322.4 238 65.1
Gohir.A10G007400 Gossypium hirsutum HOM05D007092 ORTHO05D008947 6.5e-86 321.6 238 65.1
ECA234G1665 Erigeron canadensis HOM05D007092 ORTHO05D008947 8.4e-86 321.2 284 55.6
HanXRQChr10g0311491 Helianthus annuus HOM05D007092 ORTHO05D008947 8.4e-86 321.2 308 53.9
Medtr4g006030 Medicago truncatula HOM05D007092 ORTHO05D008947 8.4e-86 321.2 303 54.5
Phvul.008G255700 Phaseolus vulgaris HOM05D007092 ORTHO05D008947 1.1e-85 320.9 256 60.2
Glyma.07G003900 Glycine max HOM05D007092 ORTHO05D008947 2.5e-85 319.7 256 60.2
Actinidia21869 Actinidia chinensis HOM05D007092 ORTHO05D008947 3.2e-85 319.3 253 61.7
PSO063G1240 Papaver somniferum HOM05D007092 ORTHO05D008947 3.2e-85 319.3 264 59.8
SalBow6G0042 Salvia bowleyana HOM05D007092 ORTHO05D008947 1.3e-83 313.9 237 64.1
TAR383G0306 Trochodendron aralioides HOM05D007092 ORTHO05D008947 1.3e-83 313.9 252 61.9
Peaxi162Scf00207g01537 Petunia axillaris HOM05D007092 ORTHO05D008947 3.0e-83 312.8 326 50.6
Sed0004999 Sechium edule HOM05D007092 ORTHO05D008947 8.7e-83 311.2 251 61.4
ATR0580G293 Amborella trichopoda HOM05D007092 ORTHO05D008947 1.1e-82 310.8 251 61.0
COL.COLO4_22872 Corchorus olitorius HOM05D007092 ORTHO05D008947 3.3e-82 309.3 269 59.5
EL10Ac7g18225 Beta vulgaris HOM05D007092 ORTHO05D008947 1.1e-80 304.3 328 50.6
MBI14_g30703_MAGBIO Magnolia biondii HOM05D007092 ORTHO05D008947 1.5e-79 300.4 314 53.8
Aqoxy7G03199 Aquilegia oxysepala HOM05D007092 ORTHO05D008947 2.0e-79 300.1 267 55.8
THA.LOC104823333 Tarenaya hassleriana HOM05D007092 ORTHO05D008947 2.9e-78 296.2 247 58.3
AUR62025584 Chenopodium quinoa HOM05D007092 ORTHO05D008947 4.2e-77 292.4 303 52.1
MELO3C024294.2 Cucumis melo HOM05D007092 ORTHO05D008947 3.6e-76 289.3 310 52.6
HPP92_017449 Vanilla planifolia HOM05D007092 ORTHO05D008947 2.9e-70 269.6 252 52.0
Hund18612 Selenicereus undatus HOM05D007092 ORTHO05D008947 2.7e-68 263.1 272 53.3
arahy.Tifrunner.gnm1.ann1.65RD4S Arachis hypogaea HOM05D007092 ORTHO05D008947 3.6e-68 262.7 204 59.8
unitig_748.g7475 Utricularia gibba HOM05D007092 ORTHO05D008947 3.0e-67 259.6 262 53.1
AUR62001368 Chenopodium quinoa HOM05D007092 ORTHO05D008947 8.2e-65 251.5 275 49.5
Lj6C21G9 Lonicera japonica HOM05D007092 ORTHO05D008947 8.2e-65 251.5 262 52.7
CDE07G2035 Ceratophyllum demersum HOM05D007092 ORTHO05D008947 5.0e-62 242.3 272 49.3
SGA_v2.0_scaffold122G33289 Striga asiatica HOM05D002895 ORTHO05D003286 4.4e-58 229.2 205 56.1
Lj6C3G1 Lonicera japonica HOM05D000076 ORTHO05D001279 3.0e-51 206.5 261 47.5
Hund18613 Selenicereus undatus HOM05D007092 ORTHO05D008947 5.2e-51 205.7 180 53.9
Cfa021192 Carpinus fangiana HOM05D007092 ORTHO05D008947 4.4e-50 202.6 133 69.2
AagrBONN_evm.TU.Sc2ySwM_344.2112 Anthoceros agrestis HOM05D007092 ORTHO05D008947 3.2e-45 186.4 268 39.2
Mapoly0073s0046 Marchantia polymorpha HOM05D007092 ORTHO05D008947 1.8e-40 170.6 252 40.5
arahy.Tifrunner.gnm1.ann1.NXC5E0 Arachis hypogaea HOM05D007092 ORTHO05D008947 3.5e-39 166.4 106 68.9
Psat7g263560 Pisum sativum HOM05D007092 ORTHO05D008947 7.7e-39 165.2 193 48.7
Pp3c13_10570 Physcomitrium patens HOM05D007092 ORTHO05D008947 7.2e-37 158.7 257 38.1
C02p30540 Brassica napus HOM05D007092 ORTHO05D008947 6.1e-36 155.6 103 66.0
SMO230G0107 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 8.0e-36 155.2 235 37.4
FAN09G2007 Fragaria x ananassa HOM05D007092 ORTHO05D008947 1.7e-33 147.5 117 64.1
arahy.Tifrunner.gnm1.ann1.DEI7NY Arachis hypogaea HOM05D007092 ORTHO05D008947 1.2e-31 141.4 81 74.1
Glyma.08G222700 Glycine max HOM05D007092 ORTHO05D008947 6.8e-27 125.6 86 66.3
SMO336G0036 Selaginella moellendorffii HOM05D007092 ORTHO05D008947 1.7e-22 110.9 267 30.0
SEGI_20536 Sequoiadendron giganteum HOM05D007092 ORTHO05D008947 1.9e-21 107.5 84 57.1
Lj6A3T47 Lonicera japonica HOM05D007092 ORTHO05D008947 2.5e-21 107.1 61 77.0
RcHm_v2.0_Chr1g0381181 Rosa chinensis HOM05D007092 ORTHO05D008947 8.9e-19 98.6 118 50.0
arahy.Tifrunner.gnm1.ann1.BLVE7G Arachis hypogaea HOM05D007092 ORTHO05D008947 4.4e-18 96.3 50 78.0
arahy.Tifrunner.gnm1.ann1.LQFB73 Arachis hypogaea HOM05D007092 ORTHO05D008947 4.4e-18 96.3 50 78.0
Cpa.g.sc1009.2 Carica papaya HOM05D007092 ORTHO05D008947 3.3e-13 80.1 96 51.0
arahy.Tifrunner.gnm1.ann1.QYJ7WZ Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-11 75.1 73 54.8
arahy.Tifrunner.gnm1.ann1.TPQB3Q Arachis hypogaea HOM05D007092 ORTHO05D008947 1.1e-11 75.1 73 54.8
BcaC07g40307 Brassica carinata HOM05D007092 ORTHO05D008947 2.3e-11 73.9 60 55.0
arahy.Tifrunner.gnm1.ann1.KBSP04 Arachis hypogaea HOM05D002221 ORTHO05D002626 2.9e-09 67.0 58 55.2
arahy.Tifrunner.gnm1.ann1.R6H1XR Arachis hypogaea HOM05D002221 ORTHO05D002626 2.9e-09 67.0 58 55.2
Actinidia38794 Actinidia chinensis HOM05D007092 ORTHO05D008947 9.2e-08 62.0 53 56.6
BcaB05g22026 Brassica carinata HOM05D007092 ORTHO05D008947 1.6e-07 61.2 62 40.3


User provided reference genes

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