Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G246500 Populus trichocarpa HOM05D006718 ORTHO05D008492 2.5e-305 1051.6 662 100.0
Sabra10G0192200 Salix brachista HOM05D006718 ORTHO05D008492 1.3e-261 906.4 662 89.9
Sabra08G0007500 Salix brachista HOM05D006718 ORTHO05D008492 1.5e-220 770.0 670 77.0
Potri.008G012250 Populus trichocarpa HOM05D006718 ORTHO05D008492 8.1e-110 402.1 368 73.4
Manes.07G082900 Manihot esculenta HOM05D006718 ORTHO05D008492 2.2e-91 340.9 691 41.0
TWI38G0042 Tripterygium wilfordii HOM05D006718 ORTHO05D008492 4.6e-73 280.0 668 35.5
Cfa010452 Carpinus fangiana HOM05D006718 ORTHO05D008492 5.1e-72 276.6 686 36.9
QL04p050382 Quercus lobata HOM05D006718 ORTHO05D008492 4.3e-71 273.5 739 35.6
Haze_03406 Corylus avellana HOM05D006718 ORTHO05D008492 3.8e-67 260.4 705 35.5
Prupe.2G061400 Prunus persica HOM05D006718 ORTHO05D008492 3.8e-67 260.4 723 37.1
Atru.chr12.1182 Acer truncatum HOM05D006718 ORTHO05D008492 7.9e-65 252.7 389 44.0
Ciclev10015184m.g Citrus clementina HOM05D006718 ORTHO05D008492 1.4e-64 251.9 598 37.3
MD02G1263300 Malus domestica HOM05D006718 ORTHO05D008492 1.4e-61 241.9 686 35.3
MD07G1054700 Malus domestica HOM05D006718 ORTHO05D008492 1.0e-59 235.7 723 34.9
Dinv24591 Davidia involucrata HOM05D006718 ORTHO05D008492 7.2e-58 229.6 688 33.1
CiPaw.13G047100 Carya illinoinensis HOM05D006718 ORTHO05D008492 1.8e-56 224.9 587 33.6
Thecc.10G129200 Theobroma cacao HOM05D006718 ORTHO05D008492 2.6e-55 221.1 632 33.1
Duzib128G0030 Durio zibethinus HOM05D006718 ORTHO05D008492 2.8e-54 217.6 421 40.9
ClCG08G008520 Citrullus lanatus HOM05D006718 ORTHO05D008492 3.8e-51 207.2 687 33.0
TAR369G0954 Trochodendron aralioides HOM05D006718 ORTHO05D008492 5.5e-50 203.4 717 33.1
MELO3C019922.2 Cucumis melo HOM05D006718 ORTHO05D008492 6.1e-49 199.9 645 32.2
CsaV3_6G004530 Cucumis sativus L. HOM05D006718 ORTHO05D008492 1.8e-48 198.4 622 32.6
RcHm_v2.0_Chr3g0490591 Rosa chinensis HOM05D006718 ORTHO05D008492 2.3e-48 198.0 356 42.1
Eucgr.J00311 Eucalyptus grandis HOM05D006718 ORTHO05D008492 4.0e-48 197.2 638 32.8
CANSAT56G0860 Cannabis sativa HOM05D006718 ORTHO05D008492 1.5e-47 195.3 686 31.5
Lalb_Chr25g0284721 Lupinus albus HOM05D006718 ORTHO05D008492 4.4e-47 193.7 619 32.8
Gorai.010G210100 Gossypium raimondii HOM05D006718 ORTHO05D008492 7.5e-47 193.0 707 31.8
Gohir.D06G179500 Gossypium hirsutum HOM05D006718 ORTHO05D008492 9.7e-47 192.6 707 31.8
Sed0008467 Sechium edule HOM05D006718 ORTHO05D008492 2.2e-46 191.4 669 34.5
Gohir.A06G171400 Gossypium hirsutum HOM05D006718 ORTHO05D008492 3.7e-46 190.7 659 31.6
Nn2g14019 Nelumbo nucifera HOM05D006718 ORTHO05D008492 1.1e-45 189.1 754 30.0
PGR044G1203 Punica granatum HOM05D006718 ORTHO05D008492 1.1e-45 189.1 698 32.1
Glyma.14G084400 Glycine max HOM05D006718 ORTHO05D008492 2.2e-43 181.4 710 29.9
FvH4_1g30390 Fragaria vesca HOM05D006718 ORTHO05D008492 2.5e-42 177.9 395 38.7
FAN19G2415 Fragaria x ananassa HOM05D006718 ORTHO05D008492 2.5e-42 177.9 395 38.7
MBI15_g36944_MAGBIO Magnolia biondii HOM05D006718 ORTHO05D008492 9.4e-42 176.0 789 30.5
AT5G18440 Arabidopsis thaliana HOM05D006718 ORTHO05D008492 1.2e-41 175.6 358 38.0
Lj7A493G35 Lonicera japonica HOM05D006718 ORTHO05D008492 1.2e-41 175.6 304 41.8
FAN23G2020 Fragaria x ananassa HOM05D006718 ORTHO05D008492 6.1e-41 173.3 397 38.5
AUR62034103 Chenopodium quinoa HOM05D006718 ORTHO05D008492 1.0e-40 172.6 403 37.0
COL.COLO4_28900 Corchorus olitorius HOM05D006718 ORTHO05D008492 3.0e-40 171.0 250 44.8
FAN28G2084 Fragaria x ananassa HOM05D006718 ORTHO05D008492 3.0e-40 171.0 390 38.2
DCAR_006628 Daucus carota HOM05D006718 ORTHO05D008492 8.8e-40 169.5 280 42.1
Phvul.011G216700 Phaseolus vulgaris HOM05D006718 ORTHO05D008492 1.2e-39 169.1 676 30.9
Thhalv10013325m.g Eutrema salsugineum HOM05D006718 ORTHO05D008492 1.5e-39 168.7 323 39.0
GSVIVG01027215001 Vitis vinifera HOM05D006718 ORTHO05D008492 3.4e-39 167.5 573 32.3
THA.LOC104811338 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 1.7e-38 165.2 327 39.1
Ca_03601_v3 Cicer arietinum L. HOM05D006718 ORTHO05D008492 3.7e-38 164.1 352 39.2
CSS0042038 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 8.3e-38 162.9 315 41.0
Carub.0006s1670 Capsella rubella HOM05D006718 ORTHO05D008492 8.3e-38 162.9 315 37.8
EL10Ac4g08778 Beta vulgaris HOM05D006718 ORTHO05D008492 1.1e-37 162.5 349 40.7
AL6G29690 Arabidopsis lyrata HOM05D006718 ORTHO05D008492 1.4e-37 162.2 310 37.7
VMungo0647G0438 Vigna mungo HOM05D006718 ORTHO05D008492 1.8e-37 161.8 526 31.2
AUR62014308 Chenopodium quinoa HOM05D006718 ORTHO05D008492 7.0e-37 159.8 403 36.2
C09p58250 Brassica napus HOM05D006718 ORTHO05D008492 3.5e-36 157.5 319 36.1
Hund06826 Selenicereus undatus HOM05D006718 ORTHO05D008492 3.5e-36 157.5 677 29.8
SGA_v2.0_scaffold196G40987 Striga asiatica HOM05D006718 ORTHO05D008492 3.5e-36 157.5 322 38.2
BolC9t58690H Brassica oleracea HOM05D006718 ORTHO05D008492 1.3e-35 155.6 304 37.2
Cc02_g32070 Coffea canephora HOM05D006718 ORTHO05D008492 6.5e-35 153.3 392 39.5
MSTRG.5086 Avicennia marina HOM05D006718 ORTHO05D008492 8.5e-35 152.9 371 35.6
SalBow4G0879 Salvia bowleyana HOM05D006718 ORTHO05D008492 1.9e-34 151.8 328 35.7
PSO339G3483 Papaver somniferum HOM05D006718 ORTHO05D008492 3.2e-34 151.0 369 36.0
Lj3g0008993 Lotus japonicus HOM05D006718 ORTHO05D008492 5.5e-34 150.2 675 29.8
BcaC04g18692 Brassica carinata HOM05D006718 ORTHO05D008492 2.1e-33 148.3 279 38.7
Medtr2g067220 Medicago truncatula HOM05D006718 ORTHO05D008492 2.1e-33 148.3 334 39.2
Sc09g0004890 Simmondsia chinensis HOM05D006718 ORTHO05D008492 2.1e-33 148.3 331 34.7
Sp6g25880 Schrenkiella parvula HOM05D006718 ORTHO05D008492 2.7e-33 147.9 366 35.5
PSO384G1654 Papaver somniferum HOM05D006718 ORTHO05D008492 8.0e-33 146.4 363 35.3
A10p21140 Brassica napus HOM05D006718 ORTHO05D008492 1.0e-32 146.0 362 34.8
CAN.G134.56 Capsicum annuum HOM05D006718 ORTHO05D008492 3.0e-32 144.4 307 41.0
Aa31LG11G11170 Aethionema arabicum HOM05D006718 ORTHO05D008492 5.2e-32 143.7 390 33.8
Glyma.17G240500 Glycine max HOM05D006718 ORTHO05D008492 6.8e-32 143.3 723 28.1
BcaB08g36679 Brassica carinata HOM05D006718 ORTHO05D008492 5.7e-31 140.2 310 36.1
ATR0068G071 Amborella trichopoda HOM05D006718 ORTHO05D008492 1.4e-29 135.6 325 36.6
Peaxi162Scf00647g00315 Petunia axillaris HOM05D006718 ORTHO05D008492 1.4e-29 135.6 625 30.9
ECA232G4797 Erigeron canadensis HOM05D006718 ORTHO05D008492 3.1e-29 134.4 318 37.7
Cpa.g.sc163.26 Carica papaya HOM05D006718 ORTHO05D008492 4.1e-29 134.0 278 38.8
Nitab4.5_0005056g0030 Nicotiana tabacum HOM05D006718 ORTHO05D008492 2.0e-28 131.7 357 35.3
Sopen01g040630 Solanum pennellii HOM05D006718 ORTHO05D008492 3.5e-28 131.0 669 30.0
Migut.N01880 Erythranthe guttata HOM05D006718 ORTHO05D008492 7.7e-28 129.8 258 38.4
CARHR194580 Cardamine hirsuta HOM05D006718 ORTHO05D008492 1.3e-27 129.0 315 34.0
Migut.O00435 Erythranthe guttata HOM05D006718 ORTHO05D008492 1.3e-27 129.0 337 34.1
Os01g0814000 Oryza sativa ssp. japonica HOM05D006718 ORTHO05D008492 1.3e-27 129.0 272 34.9
HPP92_007508 Vanilla planifolia HOM05D006718 ORTHO05D008492 1.3e-27 129.0 338 35.2
PGSC0003DMG400027524 Solanum tuberosum HOM05D006718 ORTHO05D008492 2.9e-27 127.9 694 29.7
Ah.06g191200 Amaranthus hybridus HOM05D006718 ORTHO05D008492 5.0e-27 127.1 301 33.6
FAN26G3384 Fragaria x ananassa HOM05D006718 ORTHO05D008492 5.0e-27 127.1 422 32.7
Solyc01g096920.3 Solanum lycopersicum HOM05D006718 ORTHO05D008492 1.1e-26 125.9 682 29.2
Nitab4.5_0001611g0090 Nicotiana tabacum HOM05D006718 ORTHO05D008492 1.5e-26 125.6 742 28.2
TPR.G33809 Trifolium pratense HOM05D006718 ORTHO05D008492 3.3e-26 124.4 310 37.1
vmacro20846 Vaccinium macrocarpon HOM05D006718 ORTHO05D008492 1.2e-25 122.5 215 39.5
Aqoxy1G00086 Aquilegia oxysepala HOM05D006718 ORTHO05D008492 3.6e-25 120.9 691 28.9
unitig_899.g15585 Utricularia gibba HOM05D006718 ORTHO05D008492 3.6e-25 120.9 353 31.7
Zm00001eb149940 Zea mays HOM05D006718 ORTHO05D008492 4.7e-25 120.6 272 33.5
THA.LOC104824416 Tarenaya hassleriana HOM05D006718 ORTHO05D008492 6.1e-25 120.2 380 33.2
BraA10t44177Z Brassica rapa HOM05D006718 ORTHO05D008492 8.0e-25 119.8 365 32.1
Lsat_1_v5_gn_4_139420 Lactuca sativa HOM05D006718 ORTHO05D008492 9.8e-23 112.8 350 33.7
Rhsim01G0121600 Rhododendron simsii HOM05D006718 ORTHO05D008492 1.4e-21 109.0 358 36.9
HanXRQChr09g0250361 Helianthus annuus HOM05D006718 ORTHO05D008492 4.1e-21 107.5 307 35.5
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 4.7e-17 94.0 267 31.8
CSS0030010 Camellia sinensis var. sinensis HOM05D006718 ORTHO05D008492 1.2e-15 89.4 265 34.7
A02p04900 Brassica napus HOM05D006718 ORTHO05D008492 3.4e-15 87.8 316 30.1
BcaB05g23323 Brassica carinata HOM05D006718 ORTHO05D008492 1.5e-10 72.4 112 39.3
Mapoly0025s0136 Marchantia polymorpha HOM05D006718 ORTHO05D008492 9.5e-10 69.7 340 25.9
AagrBONN_evm.TU.Sc2ySwM_344.1162 Anthoceros agrestis HOM05D006718 ORTHO05D008492 3.6e-09 67.8 361 26.0
Pp3c27_4140 Physcomitrium patens HOM05D006718 ORTHO05D008492 3.1e-08 64.7 94 39.4


User provided reference genes

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