Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G245000 Populus trichocarpa HOM05D006051 ORTHO05D008120 6.7e-64 247.3 134 100.0
Potri.008G012500 Populus trichocarpa HOM05D006051 ORTHO05D008120 6.6e-35 151.0 124 72.6
Sabra08G0007800 Salix brachista HOM05D006051 ORTHO05D008120 1.9e-34 149.4 124 71.8
Manes.07G077300 Manihot esculenta HOM05D006051 ORTHO05D008120 3.3e-18 95.5 128 54.7
TWI15G0662 Tripterygium wilfordii HOM05D006051 ORTHO05D008120 2.0e-15 86.3 128 53.1
GSVIVG01036588001 Vitis vinifera HOM05D006051 ORTHO05D008120 4.4e-15 85.1 93 55.9
BcaC05g29439 Brassica carinata HOM05D000059 ORTHO05D017557 6.4e-14 81.3 112 47.3
COL.COLO4_16345 Corchorus olitorius HOM05D006051 ORTHO05D008120 4.1e-13 78.6 110 48.2
SGA_v2.0_scaffold42G16175 Striga asiatica HOM05D006051 ORTHO05D008120 1.2e-12 77.0 91 50.5
FAN07G0692 Fragaria x ananassa HOM05D006051 ORTHO05D008120 1.6e-12 76.6 119 50.4
BolC3t16702H Brassica oleracea HOM05D000059 ORTHO05D017557 2.1e-12 76.3 121 47.1
Duzib128G1182 Durio zibethinus HOM05D006051 ORTHO05D008120 2.7e-12 75.9 122 45.9
Carub.0003s0990 Capsella rubella HOM05D006051 ORTHO05D008120 4.6e-12 75.1 122 47.5
Thhalv10021097m.g Eutrema salsugineum HOM05D006051 ORTHO05D008120 7.8e-12 74.3 120 48.3
Gohir.A05G285900 Gossypium hirsutum HOM05D006051 ORTHO05D008120 7.8e-12 74.3 119 45.4
A03p36690 Brassica napus HOM05D006051 ORTHO05D008120 2.3e-11 72.8 125 46.4
BraA03t12832Z Brassica rapa HOM05D000059 ORTHO05D017557 2.3e-11 72.8 125 46.4
Cpa.g.sc33.112 Carica papaya HOM05D006051 ORTHO05D008120 2.3e-11 72.8 120 45.8
MELO3C017456.2 Cucumis melo HOM05D006051 ORTHO05D008120 3.0e-11 72.4 123 45.5
FvH4_4g11580 Fragaria vesca HOM05D006051 ORTHO05D008120 3.0e-11 72.4 119 48.7
FAN12G2513 Fragaria x ananassa HOM05D006051 ORTHO05D008120 3.0e-11 72.4 119 48.7
FAN12G2962 Fragaria x ananassa HOM05D006051 ORTHO05D008120 3.0e-11 72.4 119 48.7
C03p44320 Brassica napus HOM05D000059 ORTHO05D017557 3.9e-11 72.0 121 47.1
CDE07G1672 Ceratophyllum demersum HOM05D006051 ORTHO05D008120 3.9e-11 72.0 66 56.1
Gorai.009G302000 Gossypium raimondii HOM05D006051 ORTHO05D008120 3.9e-11 72.0 112 46.4
Sp3g08990 Schrenkiella parvula HOM05D006051 ORTHO05D008120 3.9e-11 72.0 125 45.6
SGA_v2.0_scaffold121G33040 Striga asiatica HOM05D000250 ORTHO05D000625 3.9e-11 72.0 91 48.4
Thecc.10G124400 Theobroma cacao HOM05D006051 ORTHO05D008120 3.9e-11 72.0 126 43.7
BcaB02g11028 Brassica carinata HOM05D006051 ORTHO05D017557 6.6e-11 71.2 99 46.5
Dinv34507 Davidia involucrata HOM05D006051 ORTHO05D008120 6.6e-11 71.2 123 49.6
CiPaw.13G045900 Carya illinoinensis HOM05D006051 ORTHO05D008120 8.6e-11 70.9 106 50.0
RcHm_v2.0_Chr6g0244501 Rosa chinensis HOM05D006051 ORTHO05D008120 8.6e-11 70.9 74 55.4
C05p57410 Brassica napus HOM05D000059 ORTHO05D017557 1.1e-10 70.5 126 44.4
BolC5t34397H Brassica oleracea HOM05D000059 ORTHO05D017557 1.1e-10 70.5 126 44.4
CSS0033370 Camellia sinensis var. sinensis HOM05D006051 ORTHO05D008120 1.1e-10 70.5 126 45.2
CAN.G174.7 Capsicum annuum HOM05D006051 ORTHO05D008120 1.1e-10 70.5 111 45.9
CDE06G2681 Ceratophyllum demersum HOM05D006051 ORTHO05D008120 1.1e-10 70.5 66 54.5
PGR044G2135 Punica granatum HOM05D006051 ORTHO05D008120 1.5e-10 70.1 127 44.9
AL3G22140 Arabidopsis lyrata HOM05D006051 ORTHO05D008120 1.9e-10 69.7 126 46.0
AT3G10670 Arabidopsis thaliana HOM05D006051 ORTHO05D008120 1.9e-10 69.7 122 48.4
ClCG06G013410 Citrullus lanatus HOM05D006051 ORTHO05D008120 1.9e-10 69.7 124 43.5
Ciclev10015923m.g Citrus clementina HOM05D006051 ORTHO05D008120 1.9e-10 69.7 67 61.2
MD02G1261200 Malus domestica HOM05D006051 ORTHO05D008120 1.9e-10 69.7 85 51.8
FAN04G2808 Fragaria x ananassa HOM05D006051 ORTHO05D008120 3.3e-10 68.9 119 47.9
MD07G1059800 Malus domestica HOM05D006051 ORTHO05D008120 3.3e-10 68.9 88 58.0
Hund06815 Selenicereus undatus HOM05D006051 ORTHO05D008120 3.3e-10 68.9 125 45.6
Gohir.D05G287000 Gossypium hirsutum HOM05D006051 ORTHO05D008120 4.3e-10 68.6 110 43.6
Aa31LG3G3530 Aethionema arabicum HOM05D006051 ORTHO05D008120 5.6e-10 68.2 115 40.9
CiPaw.14G036600 Carya illinoinensis HOM05D006051 ORTHO05D008120 5.6e-10 68.2 42 81.0
CsaV3_1G031660 Cucumis sativus L. HOM05D006051 ORTHO05D008120 5.6e-10 68.2 121 43.0
Lj1A969G90 Lonicera japonica HOM05D006051 ORTHO05D008120 5.6e-10 68.2 91 48.4
EL10Ac4g08746 Beta vulgaris HOM05D006051 ORTHO05D008120 9.6e-10 67.4 121 43.8
Cc02_g05120 Coffea canephora HOM05D006051 ORTHO05D008120 9.6e-10 67.4 112 42.0
QL04p049349 Quercus lobata HOM05D006051 ORTHO05D008120 9.6e-10 67.4 121 47.1
Nitab4.5_0012485g0010 Nicotiana tabacum HOM05D006051 ORTHO05D008120 1.2e-09 67.0 115 46.1
A05p38510 Brassica napus HOM05D000059 ORTHO05D017557 1.6e-09 66.6 126 44.4
BraA05t22642Z Brassica rapa HOM05D000059 ORTHO05D017557 1.6e-09 66.6 126 44.4
Cfa010484 Carpinus fangiana HOM05D006051 ORTHO05D008120 1.6e-09 66.6 89 52.8
Eucgr.J00305 Eucalyptus grandis HOM05D006051 ORTHO05D008120 1.6e-09 66.6 120 42.5
TAR633G1896 Trochodendron aralioides HOM05D006051 ORTHO05D008120 1.6e-09 66.6 121 41.3
Actinidia31641 Actinidia chinensis HOM05D006051 ORTHO05D008120 2.1e-09 66.2 86 50.0
Lsat_1_v5_gn_8_11321 Lactuca sativa HOM05D006051 ORTHO05D008120 2.1e-09 66.2 121 45.5
Aqoxy2G00667 Aquilegia oxysepala HOM05D006051 ORTHO05D008120 2.8e-09 65.9 102 46.1
DCAR_018048 Daucus carota HOM05D006051 ORTHO05D008120 2.8e-09 65.9 119 44.5
THA.LOC104816479 Tarenaya hassleriana HOM05D006051 ORTHO05D008120 2.8e-09 65.9 129 39.5
CARHR085250 Cardamine hirsuta HOM05D006051 ORTHO05D008120 3.6e-09 65.5 121 42.1
FAN17G1686 Fragaria x ananassa HOM05D006051 ORTHO05D008120 3.6e-09 65.5 88 48.9
MBI01_g45162_MAGBIO Magnolia biondii HOM05D006051 ORTHO05D008120 3.6e-09 65.5 96 45.8
Nitab4.5_0000171g0370 Nicotiana tabacum HOM05D001426 ORTHO05D001389 3.6e-09 65.5 76 51.3
Actinidia13633 Actinidia chinensis HOM05D006051 ORTHO05D008120 4.7e-09 65.1 127 41.7
TAR636G2651 Trochodendron aralioides HOM05D006051 ORTHO05D008120 4.7e-09 65.1 111 41.4
Nitab4.5_0000094g0030 Nicotiana tabacum HOM05D006051 ORTHO05D008120 6.2e-09 64.7 115 41.7
Migut.F01226 Erythranthe guttata HOM05D006051 ORTHO05D008120 1.1e-08 63.9 92 46.7
unitig_0.g263 Utricularia gibba HOM05D006051 ORTHO05D008120 1.1e-08 63.9 81 50.6
Nn5g26807 Nelumbo nucifera HOM05D006051 ORTHO05D008120 1.4e-08 63.5 113 41.6
Oeu039395.1 Olea europaea HOM05D006051 ORTHO05D008120 1.4e-08 63.5 120 42.5
Sed0004519 Sechium edule HOM05D006051 ORTHO05D008120 1.4e-08 63.5 121 43.0
ECA233G2097 Erigeron canadensis HOM05D006051 ORTHO05D008120 2.4e-08 62.8 108 41.7
HanXRQChr08g0221681 Helianthus annuus HOM05D006051 ORTHO05D008120 2.4e-08 62.8 101 44.6
PSO384G3752 Papaver somniferum HOM05D006051 ORTHO05D008120 2.4e-08 62.8 100 45.0
MSTRG.157 Avicennia marina HOM05D006051 ORTHO05D008120 3.1e-08 62.4 87 49.4
AUR62014283 Chenopodium quinoa HOM05D006051 ORTHO05D008120 3.1e-08 62.4 124 42.7
Ah.06g191760 Amaranthus hybridus HOM05D001282 ORTHO05D008120 4.0e-08 62.0 111 42.3
FAN22G1693 Fragaria x ananassa HOM05D006051 ORTHO05D008120 4.0e-08 62.0 121 43.0
PSO170G3597 Papaver somniferum HOM05D006051 ORTHO05D008120 4.0e-08 62.0 131 42.0
PSO339G3490 Papaver somniferum HOM05D006051 ORTHO05D008120 4.0e-08 62.0 134 42.5
Actinidia01012 Actinidia chinensis HOM05D006051 ORTHO05D008120 8.9e-08 60.8 77 49.4
Ah.04g163060 Amaranthus hybridus HOM05D006051 ORTHO05D008120 1.5e-07 60.1 112 38.4
AUR62034153 Chenopodium quinoa HOM05D006051 ORTHO05D008120 1.5e-07 60.1 126 41.3
vmacro06909 Vaccinium macrocarpon HOM05D006051 ORTHO05D008120 1.5e-07 60.1 122 42.6
Hma1.2p1_0264F.1_g105860 Hydrangea macrophylla HOM05D006051 ORTHO05D008120 2.6e-07 59.3 118 45.8
Sc09g0004830 Simmondsia chinensis HOM05D006051 ORTHO05D008120 2.6e-07 59.3 130 40.8
Peaxi162Scf00304g00081 Petunia axillaris HOM05D006051 ORTHO05D008120 3.4e-07 58.9 113 42.5
HPP92_012540 Vanilla planifolia HOM05D006051 ORTHO05D008120 4.4e-07 58.5 68 50.0
SalBow4G2472 Salvia bowleyana HOM05D006051 ORTHO05D008120 2.2e-06 56.2 65 53.8
Solyc06g048540.3 Solanum lycopersicum HOM05D006051 ORTHO05D008120 2.2e-06 56.2 109 45.0
PGSC0003DMG400027595 Solanum tuberosum HOM05D006051 ORTHO05D008120 3.8e-06 55.5 109 45.0


User provided reference genes

Program Settings