Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G238700 Populus trichocarpa HOM05D007039 ORTHO05D008886 5.3e-153 544.3 268 100.0
Sabra10G0186900 Salix brachista HOM05D007039 ORTHO05D008886 5.9e-144 514.2 268 94.0
Potri.008G020500 Populus trichocarpa HOM05D007039 ORTHO05D008886 2.0e-131 472.6 266 87.6
Atru.chr12.1023 Acer truncatum HOM05D007039 ORTHO05D008886 8.3e-114 414.1 259 75.7
CiPaw.14G032800 Carya illinoinensis HOM05D007039 ORTHO05D008886 2.1e-112 409.5 269 75.1
TWI63G1767 Tripterygium wilfordii HOM05D007039 ORTHO05D008886 3.0e-111 405.6 264 75.0
Rhsim09G0142000 Rhododendron simsii HOM05D007039 ORTHO05D008886 5.6e-110 401.4 269 72.9
Manes.07G087400 Manihot esculenta HOM05D007039 ORTHO05D008886 9.5e-110 400.6 238 79.0
Cc02_g09650 Coffea canephora HOM05D007039 ORTHO05D008886 8.9e-108 394.0 258 74.0
Dinv11837 Davidia involucrata HOM05D007039 ORTHO05D008886 2.6e-107 392.5 268 71.6
Thecc.07G140700 Theobroma cacao HOM05D007039 ORTHO05D008886 4.4e-107 391.7 242 75.6
Ciclev10016452m.g Citrus clementina HOM05D007039 ORTHO05D008886 2.2e-106 389.4 239 75.7
Gohir.A06G173100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 2.9e-106 389.0 269 69.5
Oeu025598.1 Olea europaea HOM05D007039 ORTHO05D008886 2.9e-106 389.0 250 74.8
GSVIVG01001001001 Vitis vinifera HOM05D007039 ORTHO05D008886 2.9e-106 389.0 258 71.7
Cfa011268 Carpinus fangiana HOM05D007039 ORTHO05D008886 3.7e-106 388.7 256 71.9
Prupe.2G067300 Prunus persica HOM05D007039 ORTHO05D008886 4.9e-106 388.3 241 76.3
Eucgr.J00258 Eucalyptus grandis HOM05D007039 ORTHO05D008886 1.4e-105 386.7 259 71.8
Gorai.010G214000 Gossypium raimondii HOM05D007039 ORTHO05D008886 1.9e-105 386.3 269 68.8
Gorai.010G214100 Gossypium raimondii HOM05D007039 ORTHO05D008886 3.2e-105 385.6 269 68.8
Gohir.D06G183100 Gossypium hirsutum HOM05D007039 ORTHO05D008886 9.2e-105 384.0 269 68.8
Gohir.D06G182700 Gossypium hirsutum HOM05D007039 ORTHO05D008886 1.6e-104 383.3 269 68.4
MD02G1261300 Malus domestica HOM05D007039 ORTHO05D008886 3.5e-104 382.1 241 75.1
Gohir.D06G183000 Gossypium hirsutum HOM05D007039 ORTHO05D008886 7.8e-104 380.9 269 68.4
Oeu036842.1 Olea europaea HOM05D007039 ORTHO05D008886 2.3e-103 379.4 238 74.8
SalBow6G1307 Salvia bowleyana HOM05D007039 ORTHO05D008886 1.1e-102 377.1 239 74.1
TAR623G0720 Trochodendron aralioides HOM05D007039 ORTHO05D008886 1.5e-102 376.7 257 69.6
PGSC0003DMG400016998 Solanum tuberosum HOM05D007039 ORTHO05D008886 1.9e-102 376.3 258 71.7
Sopen04g004820 Solanum pennellii HOM05D007039 ORTHO05D008886 1.2e-101 373.6 258 71.3
Lj2A32T31 Lonicera japonica HOM05D007039 ORTHO05D008886 1.6e-101 373.2 242 73.1
CAN.G186.55 Capsicum annuum HOM05D007039 ORTHO05D008886 2.8e-101 372.5 258 70.9
CSS0023700 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 3.6e-101 372.1 250 72.8
COL.COLO4_17444 Corchorus olitorius HOM05D007039 ORTHO05D008886 3.6e-101 372.1 242 73.1
Solyc04g009700.3 Solanum lycopersicum HOM05D007039 ORTHO05D008886 6.2e-101 371.3 258 70.5
CSS0047124 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 8.1e-101 370.9 239 73.2
Duzib106G1061 Durio zibethinus HOM05D007039 ORTHO05D008886 8.1e-101 370.9 255 68.2
QL04p044873 Quercus lobata HOM05D007039 ORTHO05D008886 1.1e-100 370.5 241 73.0
Migut.F00878 Erythranthe guttata HOM05D007039 ORTHO05D008886 2.4e-100 369.4 236 73.3
HanXRQChr08g0217501 Helianthus annuus HOM05D007039 ORTHO05D008886 8.9e-100 367.5 239 72.4
THA.LOC104801579 Tarenaya hassleriana HOM05D007039 ORTHO05D008886 1.2e-99 367.1 239 69.9
RcHm_v2.0_Chr1g0331721 Rosa chinensis HOM05D007039 ORTHO05D008886 3.4e-99 365.5 247 72.1
CANSAT56G1368 Cannabis sativa HOM05D007039 ORTHO05D008886 4.4e-99 365.2 237 71.7
vmacro10308 Vaccinium macrocarpon HOM05D007039 ORTHO05D008886 1.3e-98 363.6 302 61.9
SGA_v2.0_scaffold62G21336 Striga asiatica HOM05D007039 ORTHO05D008886 1.7e-98 363.2 260 66.5
FAN03G1588 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.2e-98 362.8 245 72.2
Hund22275 Selenicereus undatus HOM05D007039 ORTHO05D008886 4.9e-98 361.7 251 69.7
arahy.Tifrunner.gnm1.ann1.2NV5LW Arachis hypogaea HOM05D007039 ORTHO05D008886 1.4e-97 360.1 239 71.5
arahy.Tifrunner.gnm1.ann1.XC1RGZ Arachis hypogaea HOM05D007039 ORTHO05D008886 1.9e-97 359.8 239 71.5
AUR62041513 Chenopodium quinoa HOM05D007039 ORTHO05D008886 7.1e-97 357.8 256 68.0
Lalb_Chr06g0166411 Lupinus albus HOM05D007039 ORTHO05D008886 2.1e-96 356.3 239 69.9
FAN01G2006 Fragaria x ananassa HOM05D007039 ORTHO05D008886 2.7e-96 355.9 245 71.4
Glyma.20G110700 Glycine max HOM05D007039 ORTHO05D008886 2.7e-96 355.9 240 70.4
FAN06G3803 Fragaria x ananassa HOM05D007039 ORTHO05D008886 4.6e-96 355.1 250 69.2
Lsat_1_v5_gn_8_24101 Lactuca sativa HOM05D007039 ORTHO05D008886 4.6e-96 355.1 239 69.9
Ca_25665_v3 Cicer arietinum L. HOM05D007039 ORTHO05D008886 1.7e-95 353.2 240 70.8
MD07G1059500 Malus domestica HOM05D007039 ORTHO05D008886 3.0e-95 352.4 241 70.5
Sc20g0001160 Simmondsia chinensis HOM05D007039 ORTHO05D008886 1.1e-94 350.5 260 65.8
Nn6g34917 Nelumbo nucifera HOM05D007039 ORTHO05D008886 1.5e-94 350.1 254 65.7
Phvul.007G022300 Phaseolus vulgaris HOM05D007039 ORTHO05D008886 1.5e-94 350.1 240 69.6
Lj5g0024269 Lotus japonicus HOM05D007039 ORTHO05D008886 3.3e-94 349.0 237 70.9
PSO384G1372 Papaver somniferum HOM05D007039 ORTHO05D008886 3.3e-94 349.0 259 66.4
EL10Ac4g08687 Beta vulgaris HOM05D007039 ORTHO05D008886 5.6e-94 348.2 256 66.4
Medtr1g112080 Medicago truncatula HOM05D007039 ORTHO05D008886 7.3e-94 347.8 240 69.6
PSO339G1176 Papaver somniferum HOM05D007039 ORTHO05D008886 1.2e-93 347.1 259 66.0
Aqoxy2G01207 Aquilegia oxysepala HOM05D007039 ORTHO05D008886 1.6e-93 346.7 263 63.5
VMungo0720G0617 Vigna mungo HOM05D007039 ORTHO05D008886 2.8e-93 345.9 240 68.3
TPR.G2471 Trifolium pratense HOM05D007039 ORTHO05D008886 6.2e-93 344.7 240 68.3
AUR62042080 Chenopodium quinoa HOM05D007039 ORTHO05D008886 1.8e-92 343.2 240 67.9
FAN10G1571 Fragaria x ananassa HOM05D007039 ORTHO05D008886 1.8e-92 343.2 259 66.8
Psat6g231000 Pisum sativum HOM05D007039 ORTHO05D008886 2.0e-91 339.7 240 69.6
unitig_748.g8774 Utricularia gibba HOM05D007039 ORTHO05D008886 2.9e-90 335.9 252 63.5
Sed0014501 Sechium edule HOM05D007039 ORTHO05D008886 1.9e-89 333.2 247 65.6
Ah.06g186600 Amaranthus hybridus HOM05D007039 ORTHO05D008886 9.3e-89 330.9 258 63.6
Peaxi162Scf00195g01020 Petunia axillaris HOM05D007039 ORTHO05D008886 1.6e-88 330.1 258 64.3
Nitab4.5_0003927g0060 Nicotiana tabacum HOM05D007039 ORTHO05D008886 2.1e-88 329.7 248 66.9
Cpa.g.sc56.15 Carica papaya HOM05D007039 ORTHO05D008886 3.0e-87 325.9 185 78.9
Dinv09617 Davidia involucrata HOM05D007039 ORTHO05D008886 3.0e-87 325.9 267 64.4
Os01g0859400 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 3.9e-87 325.5 252 61.5
MELO3C019894.2 Cucumis melo HOM05D007039 ORTHO05D008886 6.6e-87 324.7 247 64.4
Zm00001eb366890 Zea mays HOM05D007039 ORTHO05D008886 1.5e-86 323.6 251 61.0
Zm00001eb147230 Zea mays HOM05D007039 ORTHO05D008886 1.9e-86 323.2 251 60.2
HPP92_006806 Vanilla planifolia HOM05D007039 ORTHO05D008886 1.6e-85 320.1 253 59.3
ClCG08G008260 Citrullus lanatus HOM05D007039 ORTHO05D008886 3.1e-84 315.8 289 56.7
TAR633G1803 Trochodendron aralioides HOM05D007039 ORTHO05D008886 6.9e-84 314.7 236 61.9
ECA233G2799 Erigeron canadensis HOM05D007039 ORTHO05D008886 2.1e-77 293.1 185 73.5
MSTRG.9060 Avicennia marina HOM05D007039 ORTHO05D008886 8.1e-77 291.2 182 72.5
Oeu036841.1 Olea europaea HOM05D007039 ORTHO05D008886 3.1e-76 289.3 182 74.2
Eucgr.J00257 Eucalyptus grandis HOM05D007039 ORTHO05D008886 4.5e-75 285.4 182 74.7
PGSC0003DMG400023289 Solanum tuberosum HOM05D007039 ORTHO05D008886 2.9e-74 282.7 183 73.8
PGR142G0235 Punica granatum HOM05D007039 ORTHO05D008886 1.6e-72 276.9 181 72.4
HPP92_009745 Vanilla planifolia HOM05D007039 ORTHO05D008886 5.6e-70 268.5 232 52.2
FvH4_7g05130 Fragaria vesca HOM05D007039 ORTHO05D008886 7.4e-70 268.1 182 69.8
Glyma.10G279000 Glycine max HOM05D007039 ORTHO05D008886 9.6e-70 267.7 237 57.8
HPP92_009768 Vanilla planifolia HOM05D007039 ORTHO05D008886 2.8e-69 266.2 232 51.7
CSS0008887 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.4e-68 263.8 187 68.4
Zm00001eb092690 Zea mays HOM05D007039 ORTHO05D008886 1.5e-67 260.4 237 50.6
Os12g0152800 Oryza sativa ssp. japonica HOM05D007039 ORTHO05D008886 4.2e-65 252.3 238 48.3
CsaV3_6G004220 Cucumis sativus L. HOM05D007039 ORTHO05D008886 8.7e-63 244.6 180 64.4
CSS0041399 Camellia sinensis var. sinensis HOM05D007039 ORTHO05D008886 1.6e-61 240.4 178 67.4
Mapoly0010s0050 Marchantia polymorpha HOM05D007039 ORTHO05D008886 6.9e-60 235.0 239 46.4
SMO367G0592 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 8.5e-58 228.0 229 48.0
AagrBONN_evm.TU.Sc2ySwM_362.1562 Anthoceros agrestis HOM05D007039 ORTHO05D008886 5.1e-55 218.8 237 43.5
Pp3c15_5790 Physcomitrium patens HOM05D007039 ORTHO05D008886 3.3e-54 216.1 251 42.6
AagrBONN_evm.TU.Sc2ySwM_228.3073 Anthoceros agrestis HOM05D007039 ORTHO05D008886 7.7e-51 204.9 215 45.6
CBR_g32363 Chara braunii HOM05D007039 ORTHO05D008886 1.7e-50 203.8 199 48.2
DCAR_019005 Daucus carota HOM05D007039 ORTHO05D008886 1.9e-49 200.3 109 76.1
CDE08G0883 Ceratophyllum demersum HOM05D007039 ORTHO05D008886 1.6e-48 197.2 147 55.8
Zm00001eb197030 Zea mays HOM05D007039 ORTHO05D008886 2.1e-48 196.8 179 48.0
SMO353G0277 Selaginella moellendorffii HOM05D007039 ORTHO05D008886 2.0e-38 163.7 181 44.8
Nitab4.5_0000691g0070 Nicotiana tabacum HOM05D007039 ORTHO05D008886 2.1e-32 143.7 247 38.9
Cre01.g018100 Chlamydomonas reinhardtii HOM05D007039 ORTHO05D008886 8.0e-32 141.7 204 34.8
MD04G1248500 Malus domestica HOM05D007039 ORTHO05D008886 1.7e-29 134.0 106 64.2
PRCOL_00002076 Prasinoderma coloniale HOM05D007039 ORTHO05D008886 4.8e-21 105.9 116 40.5
arahy.Tifrunner.gnm1.ann1.9L1IQQ Arachis hypogaea HOM05D001866 ORTHO05D001915 1.4e-07 61.2 175 29.1


User provided reference genes

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