Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G231250 Populus trichocarpa HOM05D000005 ORTHO05D331805 1.1e-33 146.0 69 100.0
Potri.019G004599 Populus trichocarpa HOM05D000005 ORTHO05D000012 9.9e-11 69.7 73 49.3
Potri.003G084333 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.2e-10 68.6 67 47.8
Potri.007G143100 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.9e-10 68.2 73 49.3
Potri.007G142600 Populus trichocarpa HOM05D000005 ORTHO05D000012 4.9e-10 67.4 73 47.9
Potri.T011750 Populus trichocarpa HOM05D000005 ORTHO05D000012 4.9e-10 67.4 73 49.3
Potri.019G021681 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.1e-09 66.2 73 47.9
Potri.T002428 Populus trichocarpa HOM05D000005 ORTHO05D000239 1.4e-09 65.9 72 47.2
Potri.003G014200 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.9e-09 65.5 73 46.6
Potri.T001500 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.9e-09 65.5 73 47.9
Potri.T002066 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.9e-09 65.5 73 47.9
Potri.019G016425 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.4e-09 65.1 73 47.9
Potri.019G052000 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.4e-09 65.1 67 47.8
Potri.T002200 Populus trichocarpa HOM05D000005 ORTHO05D000012 3.2e-09 64.7 72 48.6
Potri.001G066500 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.4e-09 63.9 67 44.8
Potri.T001933 Populus trichocarpa HOM05D000005 ORTHO05D000012 5.4e-09 63.9 73 46.6
Potri.T002300 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.1e-09 63.5 73 46.6
Potri.019G019053 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.2e-08 62.8 67 46.3
Potri.019G046000 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.6e-08 62.4 73 46.6
Potri.017G010800 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.1e-08 62.0 74 45.9
Potri.T002400 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.7e-08 61.6 73 45.2
Duzib268G0430 Durio zibethinus HOM05D000005 ORTHO05D000012 7.9e-08 60.1 73 42.5
Potri.019G019710 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.9e-08 60.1 73 46.6
QL03p025185 Quercus lobata HOM05D000005 ORTHO05D000012 7.9e-08 60.1 71 39.4
Dinv17761 Davidia involucrata HOM05D000005 ORTHO05D000012 1.0e-07 59.7 72 40.3
Manes.11G156500 Manihot esculenta HOM05D000005 ORTHO05D000012 1.0e-07 59.7 73 45.2
Potri.T002568 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.3e-07 59.3 67 44.8
arahy.Tifrunner.gnm1.ann1.82EEBY Arachis hypogaea HOM05D000005 ORTHO05D000012 1.8e-07 58.9 72 40.3
arahy.Tifrunner.gnm1.ann1.G052FX Arachis hypogaea HOM05D000005 ORTHO05D000012 1.8e-07 58.9 72 40.3
Potri.012G135700 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.8e-07 58.9 67 38.8
Potri.013G037599 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.8e-07 58.9 65 40.0
Potri.008G030002 Populus trichocarpa HOM05D000005 ORTHO05D332497 2.3e-07 58.5 70 48.6
Thecc.04G194200 Theobroma cacao HOM05D000005 ORTHO05D000012 2.3e-07 58.5 73 41.1
CSS0019268 Camellia sinensis var. sinensis HOM05D000005 ORTHO05D000012 3.0e-07 58.2 72 38.9
Glyma.U033005 Glycine max HOM05D000005 ORTHO05D000012 3.9e-07 57.8 77 37.7
GSVIVG01038755001 Vitis vinifera HOM05D000005 ORTHO05D011281 3.9e-07 57.8 72 37.5
ATR1152G038 Amborella trichopoda HOM05D000005 ORTHO05D000012 5.1e-07 57.4 67 41.8
arahy.Tifrunner.gnm1.ann1.G02YMJ Arachis hypogaea HOM05D000005 ORTHO05D000012 5.1e-07 57.4 74 37.8
QL07p003457 Quercus lobata HOM05D000005 ORTHO05D000012 5.1e-07 57.4 73 39.7
arahy.Tifrunner.gnm1.ann1.T23TII Arachis hypogaea HOM05D000005 ORTHO05D000012 6.7e-07 57.0 72 38.9
Nn7g36991 Nelumbo nucifera HOM05D000005 ORTHO05D000012 6.7e-07 57.0 64 37.5
Duzib268G1112 Durio zibethinus HOM05D000005 ORTHO05D000012 8.7e-07 56.6 73 39.7
QL03p025163 Quercus lobata HOM05D000005 ORTHO05D000012 8.7e-07 56.6 71 38.0
QL03p004829 Quercus lobata HOM05D000005 ORTHO05D000012 1.1e-06 56.2 72 34.7
TWI53G0659 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 1.1e-06 56.2 72 37.5
arahy.Tifrunner.gnm1.ann1.BG67S6 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.5e-06 55.8 74 37.8
Duzib268G1802 Durio zibethinus HOM05D000005 ORTHO05D000012 1.5e-06 55.8 73 41.1
Lsat_1_v5_gn_2_4940 Lactuca sativa HOM05D000005 ORTHO05D035157 1.5e-06 55.8 72 44.4
Lj2g0014678 Lotus japonicus HOM05D000005 ORTHO05D000012 1.5e-06 55.8 67 37.3
Potri.019G017082 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.5e-06 55.8 72 45.8
Duzib268G0041 Durio zibethinus HOM05D000005 ORTHO05D000012 1.9e-06 55.5 73 39.7
Potri.019G098500 Populus trichocarpa HOM05D000005 ORTHO05D000012 1.9e-06 55.5 73 41.1
Potri.019G003285 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.5e-06 55.1 66 42.4
Potri.019G003942 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.5e-06 55.1 66 42.4
Potri.T005501 Populus trichocarpa HOM05D000005 ORTHO05D000012 2.5e-06 55.1 66 42.4
COL.COLO4_36369 Corchorus olitorius HOM05D000005 ORTHO05D000012 3.3e-06 54.7 73 41.1
Glyma.07G037000 Glycine max HOM05D000005 ORTHO05D000012 3.3e-06 54.7 75 34.7
Nn8g40948 Nelumbo nucifera HOM05D000005 ORTHO05D000012 3.3e-06 54.7 73 38.4
Cc08_g06840 Coffea canephora HOM05D000005 ORTHO05D000012 4.3e-06 54.3 76 35.5
Duzib212G0049 Durio zibethinus HOM05D000005 ORTHO05D000012 4.3e-06 54.3 64 39.1
HanXRQChr06g0183841 Helianthus annuus HOM05D000005 ORTHO05D035157 4.3e-06 54.3 72 34.7
Prupe.8G120300 Prunus persica HOM05D000005 ORTHO05D000012 4.3e-06 54.3 75 36.0
TPR.G32474 Trifolium pratense HOM05D000005 ORTHO05D000012 4.3e-06 54.3 75 37.3
Duzib268G1448 Durio zibethinus HOM05D000005 ORTHO05D000012 5.6e-06 53.9 73 39.7
QL12p039303 Quercus lobata HOM05D000005 ORTHO05D000012 5.6e-06 53.9 76 36.8
TWI36G1442 Tripterygium wilfordii HOM05D000005 ORTHO05D000012 5.6e-06 53.9 73 42.5
Medtr4g036080 Medicago truncatula HOM05D000005 ORTHO05D000012 7.4e-06 53.5 77 39.0
Nn5g27819 Nelumbo nucifera HOM05D000005 ORTHO05D000012 7.4e-06 53.5 76 38.2
Potri.007G143300 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.4e-06 53.5 74 41.9
Potri.019G001971 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.4e-06 53.5 65 41.5
Potri.019G007884 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.4e-06 53.5 66 37.9
Potri.T009323 Populus trichocarpa HOM05D000005 ORTHO05D000012 7.4e-06 53.5 65 40.0
QL10p003281 Quercus lobata HOM05D000005 ORTHO05D000012 7.4e-06 53.5 72 33.3
ATR1152G012 Amborella trichopoda HOM05D000005 ORTHO05D000012 9.6e-06 53.1 67 37.3
CiPaw.14G075500 Carya illinoinensis HOM05D000005 ORTHO05D000012 9.6e-06 53.1 72 36.1
CiPaw.15G158500 Carya illinoinensis HOM05D000005 ORTHO05D000012 9.6e-06 53.1 74 33.8
CiPaw.15G176500 Carya illinoinensis HOM05D000005 ORTHO05D000012 9.6e-06 53.1 76 31.6
Eucgr.C01654 Eucalyptus grandis HOM05D000005 ORTHO05D017911 9.6e-06 53.1 58 39.7
Manes.18G114900 Manihot esculenta HOM05D000005 ORTHO05D000012 9.6e-06 53.1 66 40.9
QL11p020288 Quercus lobata HOM05D000005 ORTHO05D000012 9.6e-06 53.1 65 41.5
TPR.G20786 Trifolium pratense HOM05D000005 ORTHO05D000012 9.6e-06 53.1 67 34.3


User provided reference genes

Program Settings