Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G223700 Populus trichocarpa HOM05D006193 ORTHO05D007808 1.8e-69 265.8 131 100.0
Sabra10G0173000 Salix brachista HOM05D006193 ORTHO05D007808 6.8e-61 237.3 170 74.7
Manes.10G047101 Manihot esculenta HOM05D006193 ORTHO05D007808 3.9e-48 194.9 133 73.7
Duzib114G0385 Durio zibethinus HOM05D006193 ORTHO05D007808 1.9e-47 192.6 134 70.1
Haze_16878 Corylus avellana HOM05D006193 ORTHO05D007808 9.6e-47 190.3 134 69.4
Thecc.10G076000 Theobroma cacao HOM05D006193 ORTHO05D007808 1.6e-46 189.5 134 69.4
Gohir.D06G175300 Gossypium hirsutum HOM05D006193 ORTHO05D007808 2.1e-46 189.1 134 68.7
Gorai.010G205700 Gossypium raimondii HOM05D006193 ORTHO05D007808 2.1e-46 189.1 134 68.7
Actinidia38857 Actinidia chinensis HOM05D006193 ORTHO05D007808 4.7e-46 188.0 131 69.5
Atru.chr12.797 Acer truncatum HOM05D006193 ORTHO05D007808 1.4e-45 186.4 136 72.1
Cfa001656 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.4e-45 186.4 131 69.5
Cfa001990 Carpinus fangiana HOM05D006193 ORTHO05D007808 1.4e-45 186.4 134 67.9
Gohir.A06G167900 Gossypium hirsutum HOM05D006193 ORTHO05D007808 1.4e-45 186.4 134 67.9
Ciclev10033053m.g Citrus clementina HOM05D006193 ORTHO05D007808 2.4e-45 185.7 134 70.9
COL.COLO4_28414 Corchorus olitorius HOM05D006193 ORTHO05D007808 6.8e-45 184.1 133 68.4
TWI63G1140 Tripterygium wilfordii HOM05D006193 ORTHO05D007808 8.9e-45 183.7 131 70.2
Duzib128G0799 Durio zibethinus HOM05D006193 ORTHO05D007808 2.6e-44 182.2 143 65.0
CSS0007064 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 7.6e-44 180.6 139 67.6
Lsat_1_v5_gn_1_77620 Lactuca sativa HOM05D006193 ORTHO05D007808 1.7e-43 179.5 132 68.9
QL08p055470 Quercus lobata HOM05D006193 ORTHO05D007808 6.4e-43 177.6 132 68.9
Prupe.2G212200 Prunus persica HOM05D006193 ORTHO05D007808 8.4e-43 177.2 131 66.4
TAR623G1160 Trochodendron aralioides HOM05D006193 ORTHO05D007808 1.1e-42 176.8 131 69.5
Eucgr.J01081 Eucalyptus grandis HOM05D006193 ORTHO05D007808 2.4e-42 175.6 130 66.9
TAR369G0988 Trochodendron aralioides HOM05D006193 ORTHO05D007808 3.2e-42 175.3 130 69.2
MSTRG.27474 Avicennia marina HOM05D006193 ORTHO05D007808 9.3e-42 173.7 123 70.7
Nn2g10831 Nelumbo nucifera HOM05D006193 ORTHO05D007808 9.3e-42 173.7 129 69.0
ECA248G2014 Erigeron canadensis HOM05D006193 ORTHO05D007808 1.2e-41 173.3 132 65.9
FvH4_7g19210 Fragaria vesca HOM05D006193 ORTHO05D007808 1.2e-41 173.3 115 68.7
RcHm_v2.0_Chr1g0363061 Rosa chinensis HOM05D006193 ORTHO05D007808 1.2e-41 173.3 115 70.4
PGR044G2737 Punica granatum HOM05D006193 ORTHO05D007808 1.6e-41 172.9 127 68.5
THA.LOC104808680 Tarenaya hassleriana HOM05D006193 ORTHO05D007808 1.6e-41 172.9 129 67.4
CAN.G108.21 Capsicum annuum HOM05D006193 ORTHO05D007808 2.1e-41 172.6 128 66.4
BcaB04g18121 Brassica carinata HOM05D006193 ORTHO05D007808 3.5e-41 171.8 131 65.6
HanXRQChr01g0023971 Helianthus annuus HOM05D006193 ORTHO05D007808 3.5e-41 171.8 127 66.1
HanXRQChr08g0229761 Helianthus annuus HOM05D006193 ORTHO05D007808 3.5e-41 171.8 123 69.1
CiPaw.02G173400 Carya illinoinensis HOM05D006193 ORTHO05D007808 7.8e-41 170.6 101 76.2
Migut.D01650 Erythranthe guttata HOM05D006193 ORTHO05D007808 1.0e-40 170.2 121 69.4
Sopen03g003450 Solanum pennellii HOM05D006193 ORTHO05D007808 1.3e-40 169.9 131 66.4
Thhalv10026557m.g Eutrema salsugineum HOM05D006193 ORTHO05D007808 1.7e-40 169.5 131 64.9
SalBow4G2149 Salvia bowleyana HOM05D006193 ORTHO05D007808 1.7e-40 169.5 103 77.7
Solyc03g007490.3 Solanum lycopersicum HOM05D006193 ORTHO05D007808 1.7e-40 169.5 131 66.4
BolC8t48104H Brassica oleracea HOM05D006193 ORTHO05D007808 2.3e-40 169.1 131 66.4
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.3e-40 169.1 115 67.0
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.3e-40 169.1 115 67.0
BcaC07g37722 Brassica carinata HOM05D006193 ORTHO05D007808 3.0e-40 168.7 129 66.7
BraA08t33036Z Brassica rapa HOM05D006193 ORTHO05D007808 3.0e-40 168.7 129 66.7
CANSAT54G0886 Cannabis sativa HOM05D006193 ORTHO05D007808 3.0e-40 168.7 128 64.1
SGA_v2.0_scaffold355G49780 Striga asiatica HOM05D006193 ORTHO05D007808 3.0e-40 168.7 131 61.8
AL7G42250 Arabidopsis lyrata HOM05D006193 ORTHO05D007808 3.9e-40 168.3 135 63.7
Carub.0007s2828 Capsella rubella HOM05D006193 ORTHO05D007808 3.9e-40 168.3 133 63.2
DCAR_016552 Daucus carota HOM05D006193 ORTHO05D007808 5.1e-40 167.9 112 72.3
Glyma.20G180500 Glycine max HOM05D006193 ORTHO05D007808 5.1e-40 167.9 100 79.0
Migut.F01979 Erythranthe guttata HOM05D006193 ORTHO05D007808 6.6e-40 167.5 132 64.4
Glyma.10G210100 Glycine max HOM05D006193 ORTHO05D007808 6.6e-40 167.5 113 70.8
Peaxi162Scf00011g01839 Petunia axillaris HOM05D006193 ORTHO05D007808 8.7e-40 167.2 132 65.2
PGSC0003DMG400009070 Solanum tuberosum HOM05D006193 ORTHO05D007808 8.7e-40 167.2 124 69.4
A08p10360 Brassica napus HOM05D006193 ORTHO05D007808 1.1e-39 166.8 129 65.9
Phvul.007G095900 Phaseolus vulgaris HOM05D006193 ORTHO05D007808 1.1e-39 166.8 113 69.9
Lj5g0007819 Lotus japonicus HOM05D006193 ORTHO05D007808 1.5e-39 166.4 101 77.2
Sp7g11980 Schrenkiella parvula HOM05D006193 ORTHO05D007808 1.9e-39 166.0 135 63.0
Peaxi162Scf00370g00117 Petunia axillaris HOM05D006193 ORTHO05D007808 2.5e-39 165.6 131 64.1
AT4G14145 Arabidopsis thaliana HOM05D006193 ORTHO05D007808 3.3e-39 165.2 135 61.5
Nitab4.5_0000071g0090 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.3e-39 165.2 130 65.4
arahy.Tifrunner.gnm1.ann1.889ECD Arachis hypogaea HOM05D006193 ORTHO05D007808 4.3e-39 164.9 128 63.3
ATR0329G030 Amborella trichopoda HOM05D006193 ORTHO05D007808 5.6e-39 164.5 105 73.3
Hund05693 Selenicereus undatus HOM05D006193 ORTHO05D007808 5.6e-39 164.5 127 66.1
arahy.Tifrunner.gnm1.ann1.4G5N71 Arachis hypogaea HOM05D006193 ORTHO05D007808 9.6e-39 163.7 128 62.5
Lalb_Chr01g0009491 Lupinus albus HOM05D006193 ORTHO05D007808 9.6e-39 163.7 121 64.5
PSO832G3015 Papaver somniferum HOM05D006193 ORTHO05D007808 9.6e-39 163.7 129 62.8
MBI07_g44648_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 1.3e-38 163.3 130 60.8
VMungo0720G0734 Vigna mungo HOM05D006193 ORTHO05D007808 1.6e-38 162.9 113 68.1
CARHR220160 Cardamine hirsuta HOM05D006193 ORTHO05D007808 2.1e-38 162.5 104 73.1
Nitab4.5_0006507g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 2.1e-38 162.5 130 64.6
Sed0026653 Sechium edule HOM05D006193 ORTHO05D007808 2.1e-38 162.5 114 68.4
MD01G1107500 Malus domestica HOM05D006193 ORTHO05D007808 2.8e-38 162.2 103 70.9
Sed0026413 Sechium edule HOM05D006193 ORTHO05D007808 2.8e-38 162.2 132 62.1
PSO210G4078 Papaver somniferum HOM05D006193 ORTHO05D007808 4.8e-38 161.4 129 62.8
Os03g0288400 Oryza sativa ssp. japonica HOM05D006193 ORTHO05D007808 8.1e-38 160.6 120 63.3
unitig_37.g12308 Utricularia gibba HOM05D006193 ORTHO05D007808 8.1e-38 160.6 103 73.8
TPR.G1973 Trifolium pratense HOM05D006193 ORTHO05D007808 1.1e-37 160.2 128 60.2
Cc02_g11260 Coffea canephora HOM05D006193 ORTHO05D007808 1.4e-37 159.8 126 62.7
Aa31LG9G3240 Aethionema arabicum HOM05D006193 ORTHO05D007808 1.8e-37 159.5 134 61.2
Oeu014384.2 Olea europaea HOM05D006193 ORTHO05D007808 6.9e-37 157.5 157 54.1
Aqoxy1G03645 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 9.0e-37 157.1 130 62.3
CiPaw.16G031600 Carya illinoinensis HOM05D006193 ORTHO05D007808 1.5e-36 156.4 120 67.5
HPP92_011207 Vanilla planifolia HOM05D006193 ORTHO05D007808 1.5e-36 156.4 105 69.5
Zm00001eb062340 Zea mays HOM05D006193 ORTHO05D007808 1.5e-36 156.4 121 60.3
BcaC01g00219 Brassica carinata HOM05D006193 ORTHO05D007808 2.0e-36 156.0 131 60.3
GSVIVG01016260001 Vitis vinifera HOM05D006193 ORTHO05D007808 2.0e-36 156.0 126 61.1
FAN03G1544 Fragaria x ananassa HOM05D006193 ORTHO05D007808 2.6e-36 155.6 121 60.3
A08p24240 Brassica napus HOM05D006193 ORTHO05D007808 3.4e-36 155.2 124 61.3
SGA_v2.0_scaffold250G44987 Striga asiatica HOM05D006193 ORTHO05D007808 9.9e-36 153.7 115 63.5
SGA_v2.0_scaffold24G10658 Striga asiatica HOM05D006193 ORTHO05D007808 1.3e-35 153.3 126 59.5
BraA08t34379Z Brassica rapa HOM05D006193 ORTHO05D007808 1.7e-35 152.9 123 61.8
CDE03G0070 Ceratophyllum demersum HOM05D006193 ORTHO05D007808 2.9e-35 152.1 101 68.3
ClCG05G021080 Citrullus lanatus HOM05D006193 ORTHO05D007808 4.9e-35 151.4 161 49.7
Oeu042739.1 Olea europaea HOM05D006193 ORTHO05D007808 4.9e-35 151.4 144 56.9
Sc20g0001780 Simmondsia chinensis HOM05D006193 ORTHO05D007808 5.4e-34 147.9 134 57.5
MELO3C012421.2 Cucumis melo HOM05D006193 ORTHO05D007808 1.6e-33 146.4 164 48.8
Aqoxy1G03181 Aquilegia oxysepala HOM05D006193 ORTHO05D007808 8.7e-32 140.6 104 64.4
arahy.Tifrunner.gnm1.ann1.D81QGL Arachis hypogaea HOM05D006193 ORTHO05D007808 1.2e-28 130.2 105 61.0
EL10Ac7g18239 Beta vulgaris HOM05D006193 ORTHO05D007808 1.5e-28 129.8 126 54.8
Mapoly0038s0090 Marchantia polymorpha HOM05D006193 ORTHO05D007808 4.5e-28 128.3 106 57.5
arahy.Tifrunner.gnm1.ann1.N5AHK9 Arachis hypogaea HOM05D006193 ORTHO05D007808 7.6e-28 127.5 105 60.0
Psat6g182760 Pisum sativum HOM05D006193 ORTHO05D007808 1.3e-27 126.7 100 64.0
Ca_10561_v3 Cicer arietinum L. HOM05D006193 ORTHO05D007808 2.2e-27 125.9 84 70.2
Ah.08g217480 Amaranthus hybridus HOM05D006193 ORTHO05D007808 1.9e-26 122.9 126 51.6
FAN19G2294 Fragaria x ananassa HOM05D006193 ORTHO05D007808 7.1e-26 120.9 85 68.2
AUR62001381 Chenopodium quinoa HOM05D006193 ORTHO05D007808 1.8e-24 116.3 75 69.3
vmacro07063 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 7.4e-23 110.9 65 80.0
Rhsim03G0119300 Rhododendron simsii HOM05D006193 ORTHO05D007808 1.6e-22 109.8 65 80.0
MBI07_g30981_MAGBIO Magnolia biondii HOM05D006193 ORTHO05D007808 2.4e-21 105.9 104 53.8
Medtr1g094840 Medicago truncatula HOM05D006193 ORTHO05D007808 1.0e-19 100.5 71 63.4
BolC3t19959H Brassica oleracea HOM05D006193 ORTHO05D007808 1.7e-19 99.8 81 63.0
FAN06G3393 Fragaria x ananassa HOM05D006193 ORTHO05D007808 6.5e-19 97.8 66 66.7
CsaV3_5G036210 Cucumis sativus L. HOM05D006193 ORTHO05D007808 4.2e-18 95.1 66 66.7
AagrBONN_evm.TU.Sc2ySwM_228.264 Anthoceros agrestis HOM05D006193 ORTHO05D007808 1.2e-17 93.6 104 45.2
SMO232G0066 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 1.6e-17 93.2 98 42.9
Pp3c5_20880 Physcomitrium patens HOM05D006193 ORTHO05D007808 6.0e-17 91.3 103 43.7
Potri.008G038500 Populus trichocarpa HOM05D006193 ORTHO05D007808 2.3e-16 89.4 57 77.2
EL10Ac7g17093 Beta vulgaris HOM05D006193 ORTHO05D007808 4.3e-15 85.1 66 62.1
SMO241G0021 Selaginella moellendorffii HOM05D006193 ORTHO05D007808 4.3e-15 85.1 90 41.1
Lsat_1_v5_gn_2_8120 Lactuca sativa HOM05D006193 ORTHO05D007808 5.7e-15 84.7 99 48.5
Nitab4.5_0005501g0010 Nicotiana tabacum HOM05D006193 ORTHO05D007808 3.7e-14 82.0 110 47.3
vmacro07064 Vaccinium macrocarpon HOM05D006193 ORTHO05D007808 1.3e-11 73.6 64 57.8
CSS0043670 Camellia sinensis var. sinensis HOM05D006193 ORTHO05D007808 1.3e-06 57.0 79 43.0


User provided reference genes

Program Settings