Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G218500 Populus trichocarpa HOM05D031226 ORTHO05D003226 1.4e-143 513.1 277 100.0
Sabra10G0169000 Salix brachista HOM05D031226 ORTHO05D037394 6.3e-64 248.4 202 71.3
Sabra08G0029800 Salix brachista HOM05D031226 ORTHO05D037394 4.2e-60 235.7 276 51.4
Potri.010G218400 Populus trichocarpa HOM05D031226 ORTHO05D037394 1.6e-43 180.6 271 48.0
Sabra08G0029900 Salix brachista HOM05D003020 ORTHO05D003226 1.7e-32 144.1 283 41.0
Potri.010G218300 Populus trichocarpa HOM05D003020 ORTHO05D003226 2.4e-31 140.2 266 42.9
Potri.008G043300 Populus trichocarpa HOM05D003020 ORTHO05D003226 9.1e-31 138.3 284 42.6
Sabra16G0321600 Salix brachista HOM05D003020 ORTHO05D003226 5.0e-29 132.5 244 42.6
Sabra16G0323200 Salix brachista HOM05D003020 ORTHO05D003226 7.2e-28 128.6 239 42.7
Sabra10G0168900 Salix brachista HOM05D003020 ORTHO05D003226 1.2e-27 127.9 259 41.3
QL08p056680 Quercus lobata HOM05D003020 ORTHO05D003226 7.7e-22 108.6 298 33.2
Cpa.g.sc53.28 Carica papaya HOM05D003020 ORTHO05D003226 1.2e-17 94.7 286 31.1
Thecc.10G069300 Theobroma cacao HOM05D003020 ORTHO05D003226 3.4e-17 93.2 289 32.2
CiPaw.02G176000 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.3e-16 91.3 284 32.4
CiPaw.07G071600 Carya illinoinensis HOM05D003020 ORTHO05D003226 4.9e-16 89.4 284 32.0
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 8.3e-16 88.6 285 33.3
CiPaw.01G275700 Carya illinoinensis HOM05D003020 ORTHO05D003226 1.1e-15 88.2 271 30.6
RcHm_v2.0_Chr1g0364021 Rosa chinensis HOM05D003020 ORTHO05D003226 4.1e-15 86.3 284 35.9
Haze_16927 Corylus avellana HOM05D003020 ORTHO05D003226 1.6e-14 84.3 266 32.0
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 2.7e-14 83.6 279 32.6
Manes.07G102900 Manihot esculenta HOM05D003020 ORTHO05D003226 5.9e-14 82.4 288 33.0
Manes.10G043500 Manihot esculenta HOM05D003020 ORTHO05D003226 7.7e-14 82.0 249 33.7
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.0e-13 81.6 279 32.3
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.3e-13 81.3 288 31.2
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.7e-13 80.9 279 32.3
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 1.1e-12 78.2 278 30.6
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.5e-12 77.8 279 31.5
Manes.10G043600 Manihot esculenta HOM05D003020 ORTHO05D003226 2.5e-12 77.0 299 32.1
ClCG09G020480 Citrullus lanatus HOM05D003020 ORTHO05D003226 3.3e-12 76.6 257 30.7
Duzib106G1942 Durio zibethinus HOM05D003020 ORTHO05D003226 9.5e-12 75.1 294 30.6
Gorai.010G204300 Gossypium raimondii HOM05D003020 ORTHO05D003226 1.2e-11 74.7 269 30.5
FAN01G0050 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.6e-11 74.3 287 30.7
FAN01G2565 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.6e-11 74.3 287 30.7
Gohir.D06G174600 Gossypium hirsutum HOM05D003020 ORTHO05D003226 2.1e-11 73.9 267 30.0
FvH4_7g20060 Fragaria vesca HOM05D003020 ORTHO05D003226 4.7e-11 72.8 286 30.1
FAN06G2932 Fragaria x ananassa HOM05D003020 ORTHO05D003226 6.1e-11 72.4 286 30.1
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 1.0e-10 71.6 292 30.1
Gohir.A06G178400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 2.3e-10 70.5 275 28.7
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.0e-10 70.1 293 29.0
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.0e-10 69.7 284 27.8
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 5.2e-10 69.3 256 30.9
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.0e-09 67.4 281 29.5
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 2.6e-09 67.0 259 27.8
MELO3C025508.2 Cucumis melo HOM05D003020 ORTHO05D003226 5.7e-09 65.9 263 27.8
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 1.3e-08 64.7 295 24.7
CsaV3_5G025940 Cucumis sativus L. HOM05D003020 ORTHO05D003226 1.7e-08 64.3 266 28.2
Eucgr.J01114 Eucalyptus grandis HOM05D003020 ORTHO05D003226 3.7e-08 63.2 283 27.9
Nn2g12774 Nelumbo nucifera HOM05D003020 ORTHO05D003226 3.7e-08 63.2 276 29.7
Sed0002867 Sechium edule HOM05D003020 ORTHO05D003226 8.3e-08 62.0 254 30.3
Cc02_g11380 Coffea canephora HOM05D003020 ORTHO05D003226 1.1e-07 61.6 290 24.5
TWI38G1817 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.8e-07 60.8 276 27.5
TAR636G2901 Trochodendron aralioides HOM05D003020 ORTHO05D003226 2.4e-07 60.5 232 28.4
PGR044G1634 Punica granatum HOM05D003020 ORTHO05D003226 3.2e-07 60.1 258 27.9
Actinidia26625 Actinidia chinensis HOM05D003020 ORTHO05D003226 4.1e-07 59.7 94 42.6
Ciclev10033392m.g Citrus clementina HOM05D003020 ORTHO05D003226 4.1e-07 59.7 105 42.9
Cfa001601 Carpinus fangiana HOM05D003020 ORTHO05D003226 9.2e-07 58.5 268 29.5
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 1.2e-06 58.2 261 26.4
FAN10G4329 Fragaria x ananassa HOM05D003020 ORTHO05D003226 1.2e-06 58.2 230 34.8
Duzib114G0319 Durio zibethinus HOM05D003020 ORTHO05D003226 2.0e-06 57.4 252 25.8
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 2.0e-06 57.4 232 27.6
QL02p097728 Quercus lobata HOM05D003020 ORTHO05D003226 3.5e-06 56.6 262 27.9
Ca_10586_v3 Cicer arietinum L. HOM05D003020 ORTHO05D003226 4.6e-06 56.2 101 40.6
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 4.6e-06 56.2 271 29.5
FAN17G2997 Fragaria x ananassa HOM05D003020 ORTHO05D003226 5.9e-06 55.8 272 27.6
Lj1P920T18 Lonicera japonica HOM05D003020 ORTHO05D003226 5.9e-06 55.8 88 40.9
COL.COLO4_23725 Corchorus olitorius HOM05D003020 ORTHO05D003226 7.8e-06 55.5 196 32.1


User provided reference genes

Program Settings