Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 1.5e-53 212.6 106 100.0
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 2.8e-44 181.8 104 84.6
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 1.0e-43 179.9 106 84.0
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 5.0e-38 161.0 104 75.0
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 2.5e-37 158.7 106 72.6
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 1.2e-36 156.4 102 74.5
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 2.1e-36 155.6 104 72.1
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 6.1e-36 154.1 104 71.2
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 6.1e-36 154.1 104 73.1
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 1.4e-35 152.9 104 68.3
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.4e-35 152.9 106 69.8
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 1.8e-35 152.5 106 68.9
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 2.3e-35 152.1 104 71.2
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 3.0e-35 151.8 104 70.2
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 4.0e-35 151.4 104 70.2
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 6.8e-35 150.6 104 70.2
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 6.8e-35 150.6 104 70.2
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 8.9e-35 150.2 104 69.2
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 1.2e-34 149.8 98 72.4
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.2e-34 149.8 106 70.8
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 1.2e-34 149.8 104 68.3
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 5.7e-34 147.5 104 67.3
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 5.7e-34 147.5 104 70.2
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 7.5e-34 147.1 104 68.3
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 7.5e-34 147.1 102 67.6
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 9.8e-34 146.7 106 67.9
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 9.8e-34 146.7 106 67.0
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 9.8e-34 146.7 106 68.9
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 9.8e-34 146.7 103 68.0
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.3e-33 146.4 104 66.3
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 1.3e-33 146.4 104 64.4
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 1.3e-33 146.4 104 64.4
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.7e-33 146.0 104 67.3
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 1.7e-33 146.0 105 66.7
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 2.2e-33 145.6 103 66.0
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 2.2e-33 145.6 104 66.3
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 2.9e-33 145.2 104 66.3
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.9e-33 145.2 106 66.0
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 4.9e-33 144.4 106 68.9
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 4.9e-33 144.4 105 67.6
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 4.9e-33 144.4 103 67.0
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 8.3e-33 143.7 104 65.4
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 8.3e-33 143.7 104 65.4
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 1.8e-32 142.5 103 67.0
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 1.8e-32 142.5 104 65.4
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 2.4e-32 142.1 106 67.0
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 3.2e-32 141.7 106 67.9
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 3.2e-32 141.7 106 64.2
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 4.1e-32 141.4 101 69.3
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 4.1e-32 141.4 104 62.5
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.1e-32 141.4 104 64.4
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 5.4e-32 141.0 104 65.4
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 5.4e-32 141.0 101 66.3
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 9.2e-32 140.2 105 63.8
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 9.2e-32 140.2 104 64.4
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.6e-31 139.4 104 63.5
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 2.0e-31 139.0 101 68.3
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 2.0e-31 139.0 106 66.0
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 3.5e-31 138.3 104 67.3
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 3.5e-31 138.3 101 65.3
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 7.8e-31 137.1 105 66.7
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 7.8e-31 137.1 104 65.4
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 1.0e-30 136.7 105 65.7
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 1.0e-30 136.7 105 61.9
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 1.7e-30 136.0 100 65.0
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 3.9e-30 134.8 103 63.1
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 5.0e-30 134.4 104 58.7
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 5.0e-30 134.4 103 63.1
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 5.0e-30 134.4 101 68.3
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 5.0e-30 134.4 101 68.3
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 6.6e-30 134.0 104 63.5
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 6.6e-30 134.0 122 56.6
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 8.6e-30 133.7 97 69.1
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 8.6e-30 133.7 100 65.0
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 1.1e-29 133.3 106 60.4
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 1.1e-29 133.3 127 55.1
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 2.5e-29 132.1 105 61.0
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 2.5e-29 132.1 105 61.0
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 3.3e-29 131.7 103 61.2
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 5.6e-29 131.0 105 61.9
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 5.6e-29 131.0 104 61.5
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 5.6e-29 131.0 102 61.8
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 5.6e-29 131.0 104 61.5
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 9.5e-29 130.2 102 66.7
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 9.5e-29 130.2 102 60.8
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 9.5e-29 130.2 102 63.7
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 1.2e-28 129.8 104 61.5
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 2.1e-28 129.0 102 60.8
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 3.6e-28 128.3 102 60.8
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 4.7e-28 127.9 101 61.4
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 8.0e-28 127.1 102 59.8
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 8.0e-28 127.1 102 59.8
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 1.0e-27 126.7 102 59.8
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.4e-27 126.3 102 59.8
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 1.4e-27 126.3 103 59.2
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.4e-27 126.3 103 59.2
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.8e-27 125.9 104 59.6
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 1.8e-27 125.9 103 59.2
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 1.8e-27 125.9 102 59.8
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.8e-27 125.9 104 62.5
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.8e-27 125.9 104 62.5
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 1.8e-27 125.9 102 57.8
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 2.3e-27 125.6 104 60.6
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 2.3e-27 125.6 104 58.7
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 3.1e-27 125.2 101 58.4
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 3.1e-27 125.2 102 57.8
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 5.2e-27 124.4 104 61.5
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 5.2e-27 124.4 104 61.5
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 6.8e-27 124.0 103 58.3
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 6.8e-27 124.0 103 58.3
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 6.8e-27 124.0 103 58.3
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 6.8e-27 124.0 100 61.0
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 3.4e-26 121.7 102 55.9
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 3.4e-26 121.7 106 63.2
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 7.5e-26 120.6 104 55.8
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 5.4e-24 114.4 100 58.0
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 9.2e-24 113.6 102 55.9
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 1.6e-23 112.8 105 54.3
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 2.1e-20 102.4 102 52.0
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 5.2e-19 97.8 74 63.5
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 2.6e-18 95.5 83 59.0
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 7.5e-18 94.0 97 52.6
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 3.7e-17 91.7 101 48.5
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 8.3e-17 90.5 102 42.2
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 9.2e-16 87.0 100 41.0
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 1.6e-15 86.3 81 51.9
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 5.1e-14 81.3 67 56.7
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 1.5e-13 79.7 69 49.3
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 2.5e-13 79.0 100 40.0
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 4.3e-13 78.2 67 55.2
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 7.3e-13 77.4 63 61.9
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.8e-11 72.8 66 51.5
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 6.8e-11 70.9 66 50.0
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 8.4e-09 63.9 105 42.9
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 4.1e-08 61.6 52 55.8
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 7.8e-07 57.4 55 50.9
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 8.6e-06 53.9 103 31.1


User provided reference genes

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