Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G193200 Populus trichocarpa HOM05D003256 ORTHO05D001441 8.4e-54 213.4 104 100.0
Potri.008G063900 Populus trichocarpa HOM05D003256 ORTHO05D001441 2.7e-44 181.8 102 84.3
COL.COLO4_25668 Corchorus olitorius HOM05D003256 ORTHO05D001441 1.1e-42 176.4 102 78.4
Manes.07G124900 Manihot esculenta HOM05D003256 ORTHO05D001441 1.1e-42 176.4 96 83.3
Thecc.10G026900 Theobroma cacao HOM05D003256 ORTHO05D001441 1.9e-42 175.6 102 77.5
Ciclev10033656m.g Citrus clementina HOM05D003256 ORTHO05D001441 9.6e-42 173.3 102 75.5
MD01G1146400 Malus domestica HOM05D003256 ORTHO05D001441 9.6e-42 173.3 96 82.3
Gorai.011G279500 Gossypium raimondii HOM05D003256 ORTHO05D001441 2.1e-41 172.2 102 77.5
Atru.chr12.248 Acer truncatum HOM05D003256 ORTHO05D001441 8.1e-41 170.2 102 76.5
QL08p062603 Quercus lobata HOM05D003256 ORTHO05D001441 8.1e-41 170.2 96 80.2
FAN10G1586 Fragaria x ananassa HOM05D003256 ORTHO05D001441 3.1e-40 168.3 102 75.5
Prupe.2G245700 Prunus persica HOM05D003256 ORTHO05D005659 3.1e-40 168.3 96 78.1
Dinv34426 Davidia involucrata HOM05D003256 ORTHO05D001441 5.3e-40 167.5 96 78.1
Gohir.D10G243100 Gossypium hirsutum HOM05D003256 ORTHO05D001441 5.3e-40 167.5 102 75.5
CSS0012310 Camellia sinensis var. sinensis HOM05D003256 ORTHO05D001441 6.9e-40 167.2 96 78.1
CSS0030450 Camellia sinensis var. sinensis HOM05D003256 ORTHO05D001441 6.9e-40 167.2 96 78.1
FvH4_7g23970 Fragaria vesca HOM05D003256 ORTHO05D001441 1.2e-39 166.4 102 74.5
FAN06G1448 Fragaria x ananassa HOM05D003256 ORTHO05D005659 1.2e-39 166.4 102 74.5
RcHm_v2.0_Chr1g0369311 Rosa chinensis HOM05D003256 ORTHO05D001441 2.0e-39 165.6 96 78.1
Cpa.g.sc19.220 Carica papaya HOM05D003256 ORTHO05D001441 2.6e-39 165.2 96 78.1
Gohir.A10G229100 Gossypium hirsutum HOM05D003256 ORTHO05D001441 7.6e-39 163.7 102 73.5
FAN03G3030 Fragaria x ananassa HOM05D003256 ORTHO05D001441 1.7e-38 162.5 102 72.5
Eucgr.G03027 Eucalyptus grandis HOM05D003256 ORTHO05D001441 2.9e-38 161.8 97 75.3
LjContig00357g0006095 Lotus japonicus HOM05D003256 ORTHO05D001441 2.9e-38 161.8 96 77.1
TWI53G0608 Tripterygium wilfordii HOM05D003256 ORTHO05D001441 3.8e-38 161.4 96 77.1
Glyma.14G062400 Glycine max HOM05D003256 ORTHO05D001441 4.9e-38 161.0 96 74.0
TAR633G0704 Trochodendron aralioides HOM05D003256 ORTHO05D001441 8.4e-38 160.2 96 75.0
Oeu003436.1 Olea europaea HOM05D003256 ORTHO05D001441 1.4e-37 159.5 105 68.6
Cfa001371 Carpinus fangiana HOM05D003256 ORTHO05D001441 3.2e-37 158.3 96 72.9
Hma1.2p1_0026F.1_g016990 Hydrangea macrophylla HOM05D003256 ORTHO05D001441 3.2e-37 158.3 96 76.0
Psat2g035280 Pisum sativum HOM05D003256 ORTHO05D001441 3.2e-37 158.3 96 74.0
Sed0024300 Sechium edule HOM05D003256 ORTHO05D001441 3.2e-37 158.3 95 73.7
Peaxi162Scf00401g00006 Petunia axillaris HOM05D000080 ORTHO05D000053 9.3e-37 156.8 95 74.7
Medtr5g081780 Medicago truncatula HOM05D003256 ORTHO05D001441 1.2e-36 156.4 96 74.0
TPR.G8048 Trifolium pratense HOM05D003256 ORTHO05D001441 2.1e-36 155.6 96 75.0
Lsat_1_v5_gn_8_12360 Lactuca sativa HOM05D003256 ORTHO05D001441 2.7e-36 155.2 96 75.0
PGR142G3668 Punica granatum HOM05D003256 ORTHO05D001441 2.7e-36 155.2 95 69.5
Phvul.008G226800 Phaseolus vulgaris HOM05D003256 ORTHO05D001441 3.5e-36 154.8 96 74.0
MELO3C025149.2 Cucumis melo HOM05D003256 ORTHO05D005659 6.0e-36 154.1 95 69.5
CsaV3_5G008890 Cucumis sativus L. HOM05D003256 ORTHO05D001441 1.0e-35 153.3 95 69.5
Aqoxy1G00709 Aquilegia oxysepala HOM05D003256 ORTHO05D001441 1.3e-35 152.9 102 68.6
CiPaw.02G189500 Carya illinoinensis HOM05D003256 ORTHO05D001441 1.3e-35 152.9 103 69.9
ClCG07G003930 Citrullus lanatus HOM05D003256 ORTHO05D001441 2.3e-35 152.1 95 68.4
Migut.F01435 Erythranthe guttata HOM05D003256 ORTHO05D001441 8.7e-35 150.2 102 65.7
DCAR_011785 Daucus carota HOM05D003256 ORTHO05D005659 5.6e-34 147.5 96 67.7
ATR0618G299 Amborella trichopoda HOM05D003256 ORTHO05D001441 4.9e-30 134.4 102 57.8
HanXRQChr08g0222221 Helianthus annuus HOM05D003256 ORTHO05D001441 2.5e-29 132.1 85 72.9
Zm00001eb298000 Zea mays HOM05D003256 ORTHO05D001441 2.8e-25 118.6 97 59.8
FAN01G1344 Fragaria x ananassa HOM05D003256 ORTHO05D005659 5.1e-19 97.8 102 53.9
SMO367G0825 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 2.2e-17 92.4 93 44.1
Glyma.02G254100 Glycine max HOM05D003256 ORTHO05D001441 3.4e-15 85.1 56 69.6
QL12p041108 Quercus lobata HOM05D001922 ORTHO05D001441 1.4e-13 79.7 96 36.5
Sabra10G0148900 Salix brachista HOM05D003187 ORTHO05D003630 5.5e-13 77.8 54 66.7
MD08G1112100 Malus domestica HOM05D001922 ORTHO05D001441 9.4e-13 77.0 98 36.7
MD08G1112000 Malus domestica HOM05D001922 ORTHO05D001441 2.7e-12 75.5 99 36.4
Mapoly0029s0035 Marchantia polymorpha HOM05D001922 ORTHO05D001441 7.9e-12 73.9 89 39.3
Dinv23381 Davidia involucrata HOM05D001922 ORTHO05D001441 5.7e-10 67.8 99 33.3
Lsat_1_v5_gn_1_45660 Lactuca sativa HOM05D001922 ORTHO05D001441 9.7e-10 67.0 96 37.5
SMO146G0127 Selaginella moellendorffii HOM05D003256 ORTHO05D001441 9.7e-10 67.0 73 41.1
CiPaw.07G202600 Carya illinoinensis HOM05D001922 ORTHO05D001441 4.8e-09 64.7 98 32.7
FvH4_2g35420 Fragaria vesca HOM05D001922 ORTHO05D001441 6.3e-09 64.3 101 32.7
FAN27G0378 Fragaria x ananassa HOM05D001922 ORTHO05D001441 6.3e-09 64.3 101 32.7
FAN15G0048 Fragaria x ananassa HOM05D001922 ORTHO05D001441 8.2e-09 63.9 101 32.7
Solyc08g066420.1 Solanum lycopersicum HOM05D001922 ORTHO05D001441 8.2e-09 63.9 103 32.0
Gohir.D13G193400 Gossypium hirsutum HOM05D001922 ORTHO05D001441 1.1e-08 63.5 104 32.7
Gorai.013G219400 Gossypium raimondii HOM05D001922 ORTHO05D001441 1.1e-08 63.5 104 32.7
ClCG08G012170 Citrullus lanatus HOM05D001922 ORTHO05D001441 1.4e-08 63.2 106 31.1
ECA248G2877 Erigeron canadensis HOM05D001922 ORTHO05D001441 1.4e-08 63.2 90 38.9
AT2G25770 Arabidopsis thaliana HOM05D001922 ORTHO05D001441 4.1e-08 61.6 97 29.9
SMO203G0066 Selaginella moellendorffii HOM05D001922 ORTHO05D001441 4.1e-08 61.6 97 34.0
CANSAT56G0370 Cannabis sativa HOM05D001922 ORTHO05D001441 6.9e-08 60.8 102 30.4
Duzib168G0989 Durio zibethinus HOM05D001922 ORTHO05D001441 9.1e-08 60.5 104 31.7
Lj1P1172T49 Lonicera japonica HOM05D001922 ORTHO05D001441 9.1e-08 60.5 90 31.1
Thecc.09G046900 Theobroma cacao HOM05D001922 ORTHO05D001441 9.1e-08 60.5 105 30.5
Sopen08g020230 Solanum pennellii HOM05D001922 ORTHO05D001441 1.2e-07 60.1 103 31.1
CANSAT56G1185 Cannabis sativa HOM05D001922 ORTHO05D001441 1.5e-07 59.7 102 30.4
FAN20G2890 Fragaria x ananassa HOM05D001922 ORTHO05D001441 2.6e-07 58.9 101 30.7
Gohir.A13G186600 Gossypium hirsutum HOM05D001922 ORTHO05D001441 2.6e-07 58.9 104 30.8
Mapoly0006s0151 Marchantia polymorpha HOM05D038656 ORTHO05D001441 2.6e-07 58.9 104 33.7
VMungo0647G1748 Vigna mungo HOM05D001922 ORTHO05D001441 2.6e-07 58.9 106 29.2
COL.COLO4_20989 Corchorus olitorius HOM05D001922 ORTHO05D001441 4.5e-07 58.2 112 29.5
CsaV3_2G030790 Cucumis sativus L. HOM05D001922 ORTHO05D001441 5.9e-07 57.8 98 29.6
ECA248G0913 Erigeron canadensis HOM05D001922 ORTHO05D001441 5.9e-07 57.8 91 29.7
HanXRQChr11g0352331 Helianthus annuus HOM05D001922 ORTHO05D001441 5.9e-07 57.8 92 33.7
AT4G32870 Arabidopsis thaliana HOM05D001922 ORTHO05D001441 7.7e-07 57.4 102 31.4
CARHR115470 Cardamine hirsuta HOM05D001922 ORTHO05D001441 7.7e-07 57.4 97 32.0
Carub.0004s0555 Capsella rubella HOM05D001922 ORTHO05D001441 1.0e-06 57.0 101 30.7
DCAR_008621 Daucus carota HOM05D001922 ORTHO05D001441 1.3e-06 56.6 96 28.1
ECA248G3033 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.3e-06 56.6 77 40.3
Sabra06G0185100 Salix brachista HOM05D001922 ORTHO05D001441 1.3e-06 56.6 102 33.3
PGSC0003DMG400004477 Solanum tuberosum HOM05D001922 ORTHO05D001441 1.3e-06 56.6 107 29.0
MELO3C011134.2 Cucumis melo HOM05D001922 ORTHO05D001441 2.2e-06 55.8 100 31.0
RcHm_v2.0_Chr6g0306481 Rosa chinensis HOM05D001922 ORTHO05D001441 2.2e-06 55.8 97 28.9
TAR383G0559 Trochodendron aralioides HOM05D001922 ORTHO05D001441 2.2e-06 55.8 90 33.3
Nn8g39100 Nelumbo nucifera HOM05D001922 ORTHO05D001441 2.9e-06 55.5 89 32.6
Haze_21904 Corylus avellana HOM05D001922 ORTHO05D001441 3.8e-06 55.1 98 28.6
RcHm_v2.0_Chr6g0306491 Rosa chinensis HOM05D001922 ORTHO05D001441 3.8e-06 55.1 92 28.3
Cfa013381 Carpinus fangiana HOM05D001922 ORTHO05D001441 5.0e-06 54.7 79 36.7
Ca_11826_v3 Cicer arietinum L. HOM05D001922 ORTHO05D001441 5.0e-06 54.7 105 28.6
Psat6g047240 Pisum sativum HOM05D001922 ORTHO05D001441 6.5e-06 54.3 104 28.8
AL4G17440 Arabidopsis lyrata HOM05D001922 ORTHO05D001441 8.5e-06 53.9 101 27.7
Nn8g39103 Nelumbo nucifera HOM05D001922 ORTHO05D001441 8.5e-06 53.9 104 28.8
Phvul.001G063200 Phaseolus vulgaris HOM05D001922 ORTHO05D001441 8.5e-06 53.9 105 30.5


User provided reference genes

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