Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G185800 Populus trichocarpa HOM05D005937 ORTHO05D008151 0.0e+00 1788.9 878 100.0
Sabra10G0143100 Salix brachista HOM05D005937 ORTHO05D008151 0.0e+00 1620.5 943 86.2
Manes.10G010100 Manihot esculenta HOM05D005937 ORTHO05D008151 0.0e+00 1341.6 883 76.6
Duzib114G0783 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1337.8 886 75.4
Atru.chr12.85 Acer truncatum HOM05D005937 ORTHO05D008151 0.0e+00 1305.4 886 73.6
TWI09G1402 Tripterygium wilfordii HOM05D005937 ORTHO05D008151 0.0e+00 1299.3 868 73.8
Thecc.10G012700 Theobroma cacao HOM05D005937 ORTHO05D008151 0.0e+00 1293.9 883 72.9
GSVIVG01032777001 Vitis vinifera HOM05D005937 ORTHO05D008151 0.0e+00 1281.5 874 73.9
RcHm_v2.0_Chr1g0370701 Rosa chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1278.5 841 74.4
FAN01G2918 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1276.9 843 74.0
Ciclev10030686m.g Citrus clementina HOM05D005937 ORTHO05D008151 0.0e+00 1275.0 885 72.9
CiPaw.02G194600 Carya illinoinensis HOM05D005937 ORTHO05D008151 0.0e+00 1273.5 864 73.5
FvH4_7g24830 Fragaria vesca HOM05D005937 ORTHO05D008151 0.0e+00 1272.7 817 75.2
Haze_17256 Corylus avellana HOM05D005937 ORTHO05D008151 0.0e+00 1268.8 876 73.4
Gorai.011G291300 Gossypium raimondii HOM05D005937 ORTHO05D008151 0.0e+00 1268.1 887 72.2
TAR633G1521 Trochodendron aralioides HOM05D005937 ORTHO05D008151 0.0e+00 1267.7 853 74.6
FAN06G2004 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1267.3 817 74.9
MD07G1224900 Malus domestica HOM05D005937 ORTHO05D008151 0.0e+00 1262.3 878 72.1
Prupe.2G253500 Prunus persica HOM05D005937 ORTHO05D008151 0.0e+00 1255.4 874 72.2
QL08p063536 Quercus lobata HOM05D005937 ORTHO05D008151 0.0e+00 1251.5 882 71.9
FAN03G2902 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1246.1 845 72.4
Gohir.A10G239000 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1245.0 852 73.2
CSS0046957 Camellia sinensis var. sinensis HOM05D005937 ORTHO05D008151 0.0e+00 1243.0 899 70.5
Actinidia00667 Actinidia chinensis HOM05D005937 ORTHO05D008151 0.0e+00 1237.2 860 72.4
Hma1.2p1_0523F.1_g172080 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 0.0e+00 1231.5 822 72.6
Rhsim09G0179300 Rhododendron simsii HOM05D005937 ORTHO05D008151 0.0e+00 1222.2 846 71.5
Duzib106G1087 Durio zibethinus HOM05D005937 ORTHO05D008151 0.0e+00 1220.3 876 69.6
Cpa.g.sc19.149 Carica papaya HOM05D005937 ORTHO05D008151 0.0e+00 1219.1 907 68.2
Migut.F01477 Erythranthe guttata HOM05D005937 ORTHO05D008151 0.0e+00 1213.0 878 68.0
Phvul.001G244900 Phaseolus vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1209.9 866 69.3
Eucgr.J00183 Eucalyptus grandis HOM05D005937 ORTHO05D008151 0.0e+00 1205.7 828 70.9
Lalb_Chr23g0277021 Lupinus albus HOM05D005937 ORTHO05D008151 0.0e+00 1199.9 890 67.1
Glyma.11G231700 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1197.6 819 71.9
Ca_15144_v3 Cicer arietinum L. HOM05D005937 ORTHO05D008151 0.0e+00 1192.9 842 69.8
Nitab4.5_0000058g0250 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1192.2 886 67.0
Nn2g10945 Nelumbo nucifera HOM05D005937 ORTHO05D008151 0.0e+00 1191.8 852 70.1
CANSAT56G2579 Cannabis sativa HOM05D005937 ORTHO05D008151 0.0e+00 1189.1 867 69.7
ClCG11G006010 Citrullus lanatus HOM05D005937 ORTHO05D008151 0.0e+00 1184.9 817 70.7
THA.LOC104824329 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1182.5 858 67.6
Nitab4.5_0000969g0030 Nicotiana tabacum HOM05D005937 ORTHO05D008151 0.0e+00 1181.8 886 66.3
THA.LOC104811372 Tarenaya hassleriana HOM05D005937 ORTHO05D008151 0.0e+00 1181.8 817 69.9
Glyma.18G025500 Glycine max HOM05D005937 ORTHO05D008151 0.0e+00 1181.4 869 68.4
A09p48990 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1181.0 873 66.3
BraA09t40354Z Brassica rapa HOM05D005937 ORTHO05D008151 0.0e+00 1181.0 873 66.3
AT3G56040 Arabidopsis thaliana HOM05D005937 ORTHO05D008151 0.0e+00 1180.6 853 67.5
AL5G37310 Arabidopsis lyrata HOM05D005937 ORTHO05D008151 0.0e+00 1179.5 874 66.4
Thhalv10005783m.g Eutrema salsugineum HOM05D005937 ORTHO05D008151 0.0e+00 1178.3 883 65.7
Medtr3g071440 Medicago truncatula HOM05D005937 ORTHO05D008151 0.0e+00 1178.3 873 68.0
CsaV3_6G001960 Cucumis sativus L. HOM05D005937 ORTHO05D008151 0.0e+00 1176.8 815 70.8
arahy.Tifrunner.gnm1.ann1.0WF02T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1176.4 824 69.1
CARHR166110 Cardamine hirsuta HOM05D005937 ORTHO05D008151 0.0e+00 1176.4 878 65.6
Hund15900 Selenicereus undatus HOM05D005937 ORTHO05D008151 0.0e+00 1175.2 853 67.8
arahy.Tifrunner.gnm1.ann1.6RBS9T Arachis hypogaea HOM05D005937 ORTHO05D008151 0.0e+00 1174.1 824 68.9
Sed0020446 Sechium edule HOM05D005937 ORTHO05D008151 0.0e+00 1173.3 827 70.0
C08p31350 Brassica napus HOM05D005937 ORTHO05D008151 0.0e+00 1172.5 874 65.9
vmacro10023 Vaccinium macrocarpon HOM05D005937 ORTHO05D008151 0.0e+00 1172.1 867 68.9
Sp5g06500 Schrenkiella parvula HOM05D005937 ORTHO05D008151 0.0e+00 1171.0 858 66.9
VMungo1383G1379 Vigna mungo HOM05D005937 ORTHO05D008151 0.0e+00 1167.9 865 67.4
Aa31LG10G10960 Aethionema arabicum HOM05D005937 ORTHO05D008151 0.0e+00 1167.1 856 66.7
Solyc06g051080.4 Solanum lycopersicum HOM05D005937 ORTHO05D008151 0.0e+00 1164.8 884 66.6
Psat5g130440 Pisum sativum HOM05D005937 ORTHO05D008151 0.0e+00 1162.5 817 70.0
Lj6g0019628 Lotus japonicus HOM05D005937 ORTHO05D008151 0.0e+00 1160.6 848 69.2
Carub.0005s2277 Capsella rubella HOM05D005937 ORTHO05D008151 0.0e+00 1159.4 848 65.8
Sopen06g016900 Solanum pennellii HOM05D005937 ORTHO05D008151 0.0e+00 1159.1 883 66.1
Lj1C959G18 Lonicera japonica HOM05D005937 ORTHO05D008151 0.0e+00 1157.5 756 73.5
CAN.G19.18 Capsicum annuum HOM05D005937 ORTHO05D008151 0.0e+00 1155.6 877 66.0
Oeu011112.1 Olea europaea HOM05D005937 ORTHO05D008151 0.0e+00 1151.3 967 61.5
TPR.G10616 Trifolium pratense HOM05D005937 ORTHO05D008151 0.0e+00 1147.5 821 69.3
Ah.16g103770 Amaranthus hybridus HOM05D005937 ORTHO05D008151 0.0e+00 1146.0 880 65.2
EL10Ac2g04871 Beta vulgaris HOM05D005937 ORTHO05D008151 0.0e+00 1138.3 935 61.8
FAN10G1632 Fragaria x ananassa HOM05D005937 ORTHO05D008151 0.0e+00 1128.6 829 67.3
Dinv21757 Davidia involucrata HOM05D005937 ORTHO05D008151 0.0e+00 1122.5 878 67.7
Cfa001293 Carpinus fangiana HOM05D005937 ORTHO05D008151 0.0e+00 1122.1 693 77.5
PGR044G1548 Punica granatum HOM05D005937 ORTHO05D008151 0.0e+00 1121.3 866 65.5
DCAR_024814 Daucus carota HOM05D005937 ORTHO05D008151 0.0e+00 1111.3 804 67.8
HanXRQChr07g0203141 Helianthus annuus HOM05D005937 ORTHO05D008151 0.0e+00 1110.5 886 63.5
Lsat_1_v5_gn_2_123720 Lactuca sativa HOM05D005937 ORTHO05D008151 0.0e+00 1107.4 833 67.3
PSO170G3027 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1107.4 836 65.3
PSO017G4998 Papaver somniferum HOM05D005937 ORTHO05D008151 0.0e+00 1106.3 831 65.7
Aqoxy4G02431 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 0.0e+00 1099.0 823 66.0
Gohir.D10G250900 Gossypium hirsutum HOM05D005937 ORTHO05D008151 0.0e+00 1090.5 774 72.4
AUR62012278 Chenopodium quinoa HOM05D005937 ORTHO05D008151 0.0e+00 1089.7 824 64.4
ECA238G3710 Erigeron canadensis HOM05D005937 ORTHO05D008151 0.0e+00 1088.6 876 64.2
unitig_60.g25670 Utricularia gibba HOM05D005937 ORTHO05D008151 2.4e-311 1072.0 870 61.0
Cc02_g06180 Coffea canephora HOM05D005937 ORTHO05D008151 3.0e-301 1038.5 642 76.0
Peaxi162Scf00284g00620 Petunia axillaris HOM05D005937 ORTHO05D008151 1.9e-300 1035.8 877 61.1
AUR62022920 Chenopodium quinoa HOM05D005937 ORTHO05D008151 2.1e-299 1032.3 742 66.8
COL.COLO4_25772 Corchorus olitorius HOM05D005937 ORTHO05D008151 3.7e-296 1021.5 783 66.7
MD01G1156200 Malus domestica HOM05D005937 ORTHO05D008151 1.4e-295 1019.6 699 71.5
ATR0174G021 Amborella trichopoda HOM05D005937 ORTHO05D008151 1.0e-293 1013.4 857 59.2
MELO3C008313.2 Cucumis melo HOM05D005937 ORTHO05D008151 1.1e-290 1003.4 709 71.2
MBI15_g40751_MAGBIO Magnolia biondii HOM05D005937 ORTHO05D008151 1.3e-288 996.5 906 59.5
Os05g0468600 Oryza sativa ssp. japonica HOM05D005937 ORTHO05D008151 2.1e-286 989.2 798 59.9
Zm00001eb351780 Zea mays HOM05D005937 ORTHO05D008151 2.0e-281 972.6 878 56.6
Sc10g0002520 Simmondsia chinensis HOM05D005937 ORTHO05D008151 4.3e-260 901.7 693 67.1
SGA_v2.0_scaffold395G50730 Striga asiatica HOM05D005937 ORTHO05D008151 8.4e-256 887.5 749 62.2
AagrBONN_evm.TU.Sc2ySwM_368.2798 Anthoceros agrestis HOM05D005937 ORTHO05D008151 1.0e-248 864.0 855 50.3
Mapoly0007s0127 Marchantia polymorpha HOM05D005937 ORTHO05D008151 1.2e-246 857.1 862 49.5
Pp3c22_15610 Physcomitrium patens HOM05D005937 ORTHO05D008151 4.3e-236 822.0 851 48.5
SMO141G0067 Selaginella moellendorffii HOM05D005937 ORTHO05D008151 5.3e-226 788.5 743 52.5
HPP92_007567 Vanilla planifolia HOM05D005937 ORTHO05D008151 1.5e-212 743.8 800 52.0
Hma1.2p1_0523F.1_g172070 Hydrangea macrophylla HOM05D005937 ORTHO05D008151 4.4e-196 689.1 504 69.6
CBR_g61489 Chara braunii HOM05D005937 ORTHO05D008151 2.2e-195 686.8 571 54.8
Actinidia00964 Actinidia chinensis HOM05D005937 ORTHO05D008151 2.3e-192 676.8 479 68.9
PRCOL_00004696 Prasinoderma coloniale HOM05D005937 ORTHO05D008151 4.0e-157 559.7 683 42.5
Cre12.g554250 Chlamydomonas reinhardtii HOM05D005937 ORTHO05D008151 1.2e-153 548.1 796 38.7
CDE04G2743 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 3.5e-153 546.6 600 52.5
RhsimUnG0153700 Rhododendron simsii HOM05D005937 ORTHO05D008151 3.8e-123 446.8 300 73.0
HPP92_007578 Vanilla planifolia HOM05D005937 ORTHO05D008151 6.5e-123 446.0 396 56.1
BcaB01g00040 Brassica carinata HOM05D005937 ORTHO05D008151 7.4e-119 432.6 397 58.7
Rhsim12G0073000 Rhododendron simsii HOM05D005937 ORTHO05D008151 2.6e-116 424.1 299 70.6
CDE04G2646 Ceratophyllum demersum HOM05D005937 ORTHO05D008151 7.2e-98 362.8 248 66.5
SEGI_34891 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 7.5e-95 352.8 246 69.1
Aqoxy1G01260 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.1e-93 349.0 197 80.2
Aqoxy2G01148 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 2.4e-93 347.8 188 83.5
Aqoxy4G01451 Aquilegia oxysepala HOM05D005937 ORTHO05D008151 1.2e-92 345.5 186 83.9
HPP92_007579 Vanilla planifolia HOM05D005937 ORTHO05D008151 3.6e-81 307.4 217 62.7
MCO05G015 Micromonas commoda HOM05D005937 ORTHO05D008151 8.0e-81 306.2 416 38.7
BolC8t50756H Brassica oleracea HOM05D005937 ORTHO05D008151 2.0e-79 301.6 201 65.7
Ah.00g001390 Amaranthus hybridus HOM05D005937 ORTHO05D008151 6.6e-51 206.8 147 61.2
SEGI_09306 Sequoiadendron giganteum HOM05D005937 ORTHO05D008151 4.9e-46 190.7 144 54.9
vmacro09901 Vaccinium macrocarpon HOM05D003975 ORTHO05D009762 1.9e-29 135.6 163 42.9
Aqoxy4G01461 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 2.8e-25 121.7 181 45.3
Rhsim12G0072900 Rhododendron simsii HOM05D005937 ORTHO05D008151 1.0e-11 76.6 52 75.0
Hund15853 Selenicereus undatus HOM05D005937 ORTHO05D026713 2.5e-10 72.0 109 37.6
Aqoxy4G00767 Aquilegia oxysepala HOM05D005937 ORTHO05D026713 9.7e-10 70.1 95 43.2
SEGI_37602 Sequoiadendron giganteum HOM05D005937 ORTHO05D026713 3.4e-07 61.6 195 28.7
Actinidia04126 Actinidia chinensis HOM05D005937 ORTHO05D019459 1.0e-06 60.1 73 50.7
SGA_v2.0_scaffold22G09950 Striga asiatica HOM05D005937 ORTHO05D403517 8.5e-06 57.0 48 56.2


User provided reference genes

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