Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 3.5e-36 154.5 80 100.0
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 8.8e-27 123.2 77 79.2
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 1.5e-26 122.5 78 79.5
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 5.7e-26 120.6 78 80.8
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 1.3e-25 119.4 78 80.8
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 1.3e-25 119.4 78 79.5
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 1.3e-25 119.4 77 77.9
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 1.7e-25 119.0 78 76.9
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 2.8e-25 118.2 78 76.9
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 2.8e-25 118.2 78 79.5
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 3.7e-25 117.9 77 77.9
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 3.7e-25 117.9 78 74.4
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 3.7e-25 117.9 78 76.9
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 4.8e-25 117.5 78 75.6
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 6.3e-25 117.1 78 75.6
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 6.3e-25 117.1 78 75.6
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 6.3e-25 117.1 78 75.6
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 8.2e-25 116.7 78 75.6
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 1.1e-24 116.3 78 76.9
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 1.1e-24 116.3 78 76.9
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 1.4e-24 115.9 77 76.6
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 1.4e-24 115.9 78 78.2
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 1.4e-24 115.9 80 73.8
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 1.8e-24 115.5 78 75.6
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 2.4e-24 115.2 78 75.6
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 5.3e-24 114.0 78 75.6
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 5.3e-24 114.0 77 72.7
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 5.3e-24 114.0 78 74.4
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 6.9e-24 113.6 78 74.4
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 9.1e-24 113.2 78 75.6
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 9.1e-24 113.2 75 78.7
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 1.2e-23 112.8 77 74.0
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 1.5e-23 112.5 78 71.8
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.5e-23 112.5 78 70.5
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 2.6e-23 111.7 78 73.1
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 4.5e-23 110.9 78 70.5
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 4.5e-23 110.9 78 70.5
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 4.5e-23 110.9 78 70.5
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 4.5e-23 110.9 78 74.4
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 4.5e-23 110.9 78 73.1
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 5.9e-23 110.5 77 68.8
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 5.9e-23 110.5 78 74.4
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 7.7e-23 110.2 77 71.4
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 1.0e-22 109.8 77 70.1
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 1.0e-22 109.8 78 70.5
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.3e-22 109.4 77 70.1
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 1.3e-22 109.4 79 73.4
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 2.2e-22 108.6 77 72.7
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 3.8e-22 107.8 79 70.9
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 3.8e-22 107.8 82 72.0
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 8.5e-22 106.7 80 71.2
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 1.1e-21 106.3 81 70.4
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 1.4e-21 105.9 73 72.6
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 7.2e-21 103.6 86 70.9
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 9.4e-21 103.2 81 69.1
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 4.7e-20 100.9 89 64.0
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 4.7e-20 100.9 81 67.9
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 7.9e-20 100.1 80 68.8
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 1.0e-19 99.8 81 66.7
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 1.4e-19 99.4 79 68.4
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 1.4e-19 99.4 79 67.1
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 3.0e-19 98.2 82 68.3
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 3.0e-19 98.2 67 74.6
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 3.9e-19 97.8 77 70.1
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 5.1e-19 97.4 88 59.1
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 5.1e-19 97.4 79 67.1
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 5.1e-19 97.4 80 68.8
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 8.8e-19 96.7 82 67.1
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 1.1e-18 96.3 80 66.2
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 1.1e-18 96.3 88 60.2
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 2.0e-18 95.5 82 67.1
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 3.3e-18 94.7 78 62.8
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 4.4e-18 94.4 76 68.4
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 9.7e-18 93.2 80 61.2
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 3.7e-17 91.3 79 62.0
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.8e-17 90.9 79 60.8
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 6.3e-17 90.5 79 62.0
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 1.1e-16 89.7 81 60.5
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 1.1e-16 89.7 81 60.5
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.4e-16 89.4 79 59.5
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 1.4e-16 89.4 79 62.0
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 1.8e-16 89.0 89 60.7
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.1e-16 88.2 79 58.2
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.1e-16 88.2 79 58.2
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 4.1e-16 87.8 79 59.5
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 5.3e-16 87.4 79 58.2
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 9.1e-16 86.7 79 57.0
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.6e-15 85.9 79 57.0
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.6e-15 85.9 79 57.0
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 2.6e-15 85.1 78 61.5
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.6e-15 85.1 79 57.0
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 4.5e-15 84.3 81 60.5
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 4.5e-15 84.3 63 69.8
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 1.5e-13 79.3 65 66.2
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 1.9e-13 79.0 89 51.7
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 9.4e-13 76.6 71 57.7
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 8.0e-12 73.6 82 57.3
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 1.4e-11 72.8 95 47.4
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 6.3e-09 63.9 42 73.8
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 1.1e-08 63.2 83 47.0
SMO145G0072 Selaginella moellendorffii HOM05D007547 ORTHO05D009590 1.8e-08 62.4 79 51.9
Duzib114G0968 Durio zibethinus HOM05D000021 ORTHO05D000010 5.9e-07 57.4 45 66.7
Pp3c2_29500 Physcomitrium patens HOM05D007547 ORTHO05D009590 5.0e-06 54.3 82 50.0


User provided reference genes

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