Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G175600 Populus trichocarpa HOM05D007449 ORTHO05D009504 6.7e-90 334.0 164 100.0
Sabra10G0135300 Salix brachista HOM05D007449 ORTHO05D009504 5.5e-84 314.3 164 93.9
COL.COLO4_32270 Corchorus olitorius HOM05D007449 ORTHO05D009504 2.9e-69 265.4 154 81.8
Manes.16G050159 Manihot esculenta HOM05D007449 ORTHO05D009504 3.8e-69 265.0 164 78.0
GSVIVG01036691001 Vitis vinifera HOM05D007449 ORTHO05D009504 5.0e-69 264.6 158 81.6
Aqoxy5G02136 Aquilegia oxysepala HOM05D007449 ORTHO05D009504 3.2e-68 261.9 165 74.5
CsaV3_6G013330 Cucumis sativus L. HOM05D007449 ORTHO05D009504 3.2e-68 261.9 172 74.4
MELO3C019608.2 Cucumis melo HOM05D007449 ORTHO05D009504 1.2e-67 260.0 168 75.0
ClCG02G018850 Citrullus lanatus HOM05D007449 ORTHO05D009504 1.6e-67 259.6 166 75.3
RcHm_v2.0_Chr5g0022981 Rosa chinensis HOM05D007449 ORTHO05D009504 2.1e-67 259.2 163 77.9
Hma1.2p1_1417F.1_g282110 Hydrangea macrophylla HOM05D007449 ORTHO05D009504 2.7e-67 258.8 162 77.2
CSS0049228 Camellia sinensis var. sinensis HOM05D007449 ORTHO05D009504 4.7e-67 258.1 157 76.4
FAN11G1945 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.7e-67 258.1 157 77.7
Sed0001463 Sechium edule HOM05D007449 ORTHO05D009504 4.7e-67 258.1 170 74.1
Glyma.08G160000 Glycine max HOM05D007449 ORTHO05D009504 8.0e-67 257.3 157 77.1
Dinv42450 Davidia involucrata HOM05D007449 ORTHO05D009504 1.0e-66 256.9 155 79.4
Ciclev10006094m.g Citrus clementina HOM05D007449 ORTHO05D009504 2.3e-66 255.8 154 78.6
FvH4_3g13790 Fragaria vesca HOM05D007449 ORTHO05D009504 2.3e-66 255.8 157 77.7
FAN21G0170 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.3e-66 255.8 157 77.7
Lalb_Chr01g0015631 Lupinus albus HOM05D007449 ORTHO05D009504 2.3e-66 255.8 166 74.1
MBI02_g42634_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 2.3e-66 255.8 154 81.8
Cfa017774 Carpinus fangiana HOM05D007449 ORTHO05D009504 3.0e-66 255.4 160 77.5
Glyma.15G266900 Glycine max HOM05D007449 ORTHO05D009504 4.0e-66 255.0 162 75.3
ECA236G3627 Erigeron canadensis HOM05D007449 ORTHO05D009504 5.2e-66 254.6 157 78.3
CiPaw.15G111100 Carya illinoinensis HOM05D007449 ORTHO05D009504 1.2e-65 253.4 169 72.8
Duzib213G0878 Durio zibethinus HOM05D007449 ORTHO05D009504 1.2e-65 253.4 153 77.8
TWI38G0722 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.0e-65 252.7 160 73.8
TWI38G2117 Tripterygium wilfordii HOM05D007449 ORTHO05D009504 2.0e-65 252.7 160 73.8
Nn1g09860 Nelumbo nucifera HOM05D007449 ORTHO05D009504 2.6e-65 252.3 160 77.5
Gohir.D13G131200 Gossypium hirsutum HOM05D007449 ORTHO05D009504 3.3e-65 251.9 164 72.0
FAN16G1652 Fragaria x ananassa HOM05D007449 ORTHO05D009504 4.4e-65 251.5 154 77.3
Gohir.A13G127500 Gossypium hirsutum HOM05D007449 ORTHO05D009504 9.7e-65 250.4 164 71.3
Psat6g047080 Pisum sativum HOM05D007449 ORTHO05D009504 9.7e-65 250.4 165 74.5
Atru.chr1.9 Acer truncatum HOM05D007449 ORTHO05D009504 1.3e-64 250.0 153 79.1
Migut.H01650 Erythranthe guttata HOM05D007449 ORTHO05D009504 1.3e-64 250.0 166 71.7
Gorai.013G147200 Gossypium raimondii HOM05D007449 ORTHO05D009504 2.2e-64 249.2 164 71.3
HanXRQChr11g0335831 Helianthus annuus HOM05D007449 ORTHO05D009504 2.2e-64 249.2 153 77.1
Prupe.4G124700 Prunus persica HOM05D007449 ORTHO05D009504 2.2e-64 249.2 154 77.3
CANSAT56G2387 Cannabis sativa HOM05D007449 ORTHO05D009504 6.3e-64 247.7 153 79.7
Medtr1g046590 Medicago truncatula HOM05D007449 ORTHO05D009504 1.1e-63 246.9 164 74.4
arahy.Tifrunner.gnm1.ann1.4RN51I Arachis hypogaea HOM05D007449 ORTHO05D009504 1.4e-63 246.5 153 77.1
arahy.Tifrunner.gnm1.ann1.VWXD6N Arachis hypogaea HOM05D007449 ORTHO05D009504 1.4e-63 246.5 153 77.1
MD05G1240900 Malus domestica HOM05D007449 ORTHO05D009504 2.4e-63 245.7 166 72.3
THA.LOC104812400 Tarenaya hassleriana HOM05D007449 ORTHO05D009504 3.1e-63 245.4 163 74.2
Lsat_1_v5_gn_7_111001 Lactuca sativa HOM05D007449 ORTHO05D009504 5.3e-63 244.6 164 72.6
TPR.G11303 Trifolium pratense HOM05D007449 ORTHO05D009504 9.1e-63 243.8 163 73.6
MSTRG.13092 Avicennia marina HOM05D007449 ORTHO05D009504 7.7e-62 240.7 159 71.1
Thhalv10019230m.g Eutrema salsugineum HOM05D007449 ORTHO05D009504 7.7e-62 240.7 160 73.8
CDE02G1458 Ceratophyllum demersum HOM05D001125 ORTHO05D003189 1.0e-61 240.4 154 74.7
CAN.G222.124 Capsicum annuum HOM05D007449 ORTHO05D009504 1.7e-61 239.6 157 72.6
SEGI_20644 Sequoiadendron giganteum HOM05D007449 ORTHO05D009504 1.7e-61 239.6 155 72.9
SGA_v2.0_scaffold49G18211 Striga asiatica HOM05D007449 ORTHO05D009504 1.7e-61 239.6 159 70.4
TAR629G0115 Trochodendron aralioides HOM05D007449 ORTHO05D009504 2.9e-61 238.8 190 63.7
AT1G79260 Arabidopsis thaliana HOM05D007449 ORTHO05D009504 5.0e-61 238.0 159 73.0
HPP92_008133 Vanilla planifolia HOM05D007449 ORTHO05D009504 1.5e-60 236.5 162 71.6
Nitab4.5_0006598g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.9e-60 236.1 154 71.4
Os01g0679600 Oryza sativa ssp. japonica HOM05D007449 ORTHO05D009504 3.2e-60 235.3 155 69.7
Peaxi162Scf00124g01733 Petunia axillaris HOM05D007449 ORTHO05D009504 5.5e-60 234.6 153 71.2
PGSC0003DMG400013314 Solanum tuberosum HOM05D007449 ORTHO05D009504 5.5e-60 234.6 153 71.9
Nitab4.5_0005124g0020 Nicotiana tabacum HOM05D007449 ORTHO05D009504 7.2e-60 234.2 153 71.9
Rhsim10G0133000 Rhododendron simsii HOM05D007449 ORTHO05D009504 7.2e-60 234.2 196 61.7
Zm00001eb156770 Zea mays HOM05D007449 ORTHO05D009504 1.2e-59 233.4 159 66.0
AL2G39860 Arabidopsis lyrata HOM05D007449 ORTHO05D009504 2.1e-59 232.6 166 69.9
HPP92_008185 Vanilla planifolia HOM05D007449 ORTHO05D009504 2.1e-59 232.6 162 70.4
Carub.0002s2613 Capsella rubella HOM05D007449 ORTHO05D009504 2.7e-59 232.3 161 72.0
Sopen11g006460 Solanum pennellii HOM05D007449 ORTHO05D009504 2.7e-59 232.3 157 70.1
BcaB05g25191 Brassica carinata HOM05D007449 ORTHO05D009504 3.6e-59 231.9 164 70.7
BraA02t07273Z Brassica rapa HOM05D007449 ORTHO05D009504 8.0e-59 230.7 164 70.1
C02p36470 Brassica napus HOM05D007449 ORTHO05D009504 1.0e-58 230.3 154 72.1
BcaC03g15880 Brassica carinata HOM05D007449 ORTHO05D009504 1.4e-58 229.9 154 72.1
BolC2t09646H Brassica oleracea HOM05D007449 ORTHO05D009504 1.8e-58 229.6 164 68.9
Solyc11g011610.2 Solanum lycopersicum HOM05D007449 ORTHO05D009504 1.8e-58 229.6 157 69.4
Solyc11g011620.3 Solanum lycopersicum HOM05D007449 ORTHO05D009504 2.3e-58 229.2 151 70.2
A02p22730 Brassica napus HOM05D007449 ORTHO05D009504 6.8e-58 227.6 164 69.5
Nitab4.5_0001438g0030 Nicotiana tabacum HOM05D007449 ORTHO05D009504 6.8e-58 227.6 153 69.9
Oeu002792.1 Olea europaea HOM05D007449 ORTHO05D009775 8.8e-58 227.3 158 67.1
Aa31LG4G1730 Aethionema arabicum HOM05D007449 ORTHO05D009504 1.2e-57 226.9 176 65.3
ATR0109G018 Amborella trichopoda HOM05D007449 ORTHO05D009504 1.2e-57 226.9 154 70.1
vmacro12790 Vaccinium macrocarpon HOM05D007449 ORTHO05D009504 1.5e-57 226.5 234 53.4
Sp5g34340 Schrenkiella parvula HOM05D007449 ORTHO05D009504 2.0e-57 226.1 152 72.4
Cc08_g13080 Coffea canephora HOM05D007449 ORTHO05D009504 9.8e-57 223.8 167 64.7
PGR031G0327 Punica granatum HOM05D007449 ORTHO05D009504 4.1e-55 218.4 158 67.7
AagrBONN_evm.TU.Sc2ySwM_362.2319 Anthoceros agrestis HOM05D007449 ORTHO05D009504 2.7e-54 215.7 152 66.4
Actinidia33338 Actinidia chinensis HOM05D007449 ORTHO05D009504 7.7e-54 214.2 133 75.9
Phvul.005G043600 Phaseolus vulgaris HOM05D007449 ORTHO05D009504 3.8e-53 211.8 157 66.2
SMO364G0724 Selaginella moellendorffii HOM05D007449 ORTHO05D009504 1.4e-50 203.4 166 59.0
arahy.Tifrunner.gnm1.ann1.FIRH26 Arachis hypogaea HOM05D007449 ORTHO05D009504 5.2e-50 201.4 117 79.5
Eucgr.F04482 Eucalyptus grandis HOM05D007449 ORTHO05D009504 8.9e-50 200.7 147 65.3
QL04p096242 Quercus lobata HOM05D007449 ORTHO05D009504 8.9e-50 200.7 115 80.9
QL04p096050 Quercus lobata HOM05D007449 ORTHO05D009504 2.0e-49 199.5 114 80.7
Haze_18462 Corylus avellana HOM05D007449 ORTHO05D009504 4.1e-47 191.8 114 78.1
Mapoly0054s0111 Marchantia polymorpha HOM05D007449 ORTHO05D009504 4.1e-47 191.8 151 60.3
Nitab4.5_0009898g0010 Nicotiana tabacum HOM05D007449 ORTHO05D009504 1.3e-45 186.8 153 61.4
Pp3c6_12570 Physcomitrium patens HOM05D007449 ORTHO05D009504 8.9e-42 174.1 114 71.1
FAN25G3406 Fragaria x ananassa HOM05D007449 ORTHO05D009504 2.6e-41 172.6 108 76.9
MBI02_g17887_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 9.8e-41 170.6 154 62.3
Ca_03327_v3 Cicer arietinum L. HOM05D007449 ORTHO05D009504 1.4e-39 166.8 110 73.6
Lj2A6T27 Lonicera japonica HOM05D007449 ORTHO05D009504 1.8e-39 166.4 93 83.9
DCAR_013701 Daucus carota HOM05D007449 ORTHO05D009504 5.0e-37 158.3 90 78.9
Aa31LG4G1740 Aethionema arabicum HOM05D007449 ORTHO05D009504 6.2e-27 124.8 161 42.9
Nitab4.5_0001650g0100 Nicotiana tabacum HOM05D000057 ORTHO05D000021 2.0e-25 119.8 75 73.3
Nitab4.5_0007284g0070 Nicotiana tabacum HOM05D000057 ORTHO05D000021 1.1e-18 97.4 63 71.4
TPR.G35695 Trifolium pratense HOM05D000290 ORTHO05D044376 7.6e-17 91.3 67 67.2
MBI02_g30541_MAGBIO Magnolia biondii HOM05D007449 ORTHO05D009504 6.4e-16 88.2 81 64.2
Gohir.D03G088000 Gossypium hirsutum HOM05D007449 ORTHO05D000032 1.5e-12 77.0 64 59.4
Glyma.14G034600 Glycine max HOM05D007449 ORTHO05D009504 2.1e-11 73.2 47 63.8


User provided reference genes

Program Settings