Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 3.3e-173 611.7 323 100.0
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 2.1e-151 539.3 332 86.1
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 1.1e-117 427.2 326 66.0
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 7.0e-99 364.8 323 60.4
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 1.0e-97 360.9 317 59.0
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 1.2e-95 354.0 304 61.2
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 2.7e-95 352.8 301 60.8
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 6.8e-94 348.2 326 56.4
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 1.5e-93 347.1 314 58.3
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 3.4e-93 345.9 322 56.8
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 7.5e-93 344.7 331 56.8
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 2.2e-92 343.2 309 59.5
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 2.2e-92 343.2 323 57.6
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 2.8e-92 342.8 309 59.5
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.8e-92 342.8 333 56.5
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 1.8e-91 340.1 326 55.8
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 3.1e-91 339.3 328 55.2
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 4.1e-91 339.0 321 57.6
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 5.9e-90 335.1 324 55.6
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 1.0e-89 334.3 313 56.2
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 1.7e-89 333.6 282 61.0
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 2.9e-89 332.8 326 56.1
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 6.5e-89 331.6 321 53.9
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.5e-89 331.6 321 53.9
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 8.6e-89 331.3 321 53.9
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.5e-88 330.5 319 55.2
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 1.5e-88 330.5 305 59.3
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 5.5e-88 328.6 319 55.2
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 2.1e-87 326.6 319 55.2
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 2.8e-87 326.2 325 53.2
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.8e-87 326.2 309 54.4
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 4.7e-87 325.5 303 56.1
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 4.7e-87 325.5 303 56.1
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 6.1e-87 325.1 299 55.9
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.0e-86 324.3 253 63.6
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 3.0e-86 322.8 256 62.5
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 5.2e-86 322.0 327 52.0
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 6.8e-86 321.6 320 55.0
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 3.4e-85 319.3 328 52.4
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 5.7e-85 318.5 322 50.9
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 1.7e-84 317.0 328 52.1
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 3.7e-84 315.8 249 61.4
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 3.7e-84 315.8 258 58.9
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 3.7e-84 315.8 258 58.9
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 4.9e-84 315.5 324 51.9
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 6.3e-84 315.1 249 61.0
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 1.1e-83 314.3 306 54.2
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 1.1e-83 314.3 256 61.3
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 3.1e-83 312.8 324 52.5
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 3.1e-83 312.8 309 54.0
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 4.1e-83 312.4 331 51.1
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 7.0e-83 311.6 238 63.9
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 9.2e-83 311.2 265 58.9
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 1.6e-82 310.5 232 63.8
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 2.0e-82 310.1 284 57.0
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 4.5e-82 308.9 259 59.1
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.0e-81 307.8 259 58.7
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 1.0e-81 307.8 280 55.0
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 1.7e-81 307.0 230 67.4
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 2.3e-81 306.6 330 50.9
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 3.8e-81 305.8 276 58.0
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 8.6e-81 304.7 323 50.2
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 1.1e-80 304.3 323 50.8
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 1.5e-80 303.9 320 51.2
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 1.9e-80 303.5 288 55.6
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 1.9e-80 303.5 259 57.9
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 5.6e-80 302.0 267 56.2
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 1.2e-79 300.8 259 60.6
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 1.6e-79 300.4 259 60.6
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 2.8e-79 299.7 262 57.3
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 6.1e-79 298.5 262 56.9
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 6.1e-79 298.5 323 50.2
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 1.8e-78 297.0 240 60.0
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 4.0e-78 295.8 293 55.3
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 4.0e-78 295.8 322 51.2
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 6.8e-78 295.0 229 62.4
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 3.4e-77 292.7 263 55.5
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 4.4e-77 292.4 285 55.4
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 9.8e-77 291.2 269 54.6
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 1.3e-76 290.8 320 50.9
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 1.7e-76 290.4 272 55.5
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 4.9e-76 288.9 245 58.8
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 6.4e-76 288.5 245 58.8
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 8.3e-76 288.1 270 55.2
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 1.8e-75 287.0 250 56.0
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 4.1e-75 285.8 386 44.0
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 5.4e-75 285.4 323 48.3
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 7.8e-74 281.6 237 57.0
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 7.8e-74 281.6 207 64.3
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 3.0e-73 279.6 320 47.8
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 5.0e-73 278.9 272 56.2
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 5.0e-73 278.9 251 55.4
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 1.6e-71 273.9 218 61.0
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 4.7e-71 272.3 305 49.2
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.4e-70 270.8 321 48.3
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 7.0e-67 258.5 254 49.2
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 9.2e-67 258.1 239 53.6
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 4.3e-64 249.2 303 46.5
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.2e-63 247.7 229 52.4
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 1.7e-57 227.3 213 54.0
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 2.8e-55 219.9 156 65.4
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.4e-54 216.9 158 67.7
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 2.9e-52 209.9 231 49.8
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 1.9e-51 207.2 141 71.6
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 9.6e-48 194.9 300 41.7
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 8.1e-47 191.8 297 40.4
FAN10G0955 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.3e-44 184.5 194 54.6
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 4.9e-44 182.6 278 37.8
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 1.2e-42 177.9 265 40.0
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 1.0e-41 174.9 207 45.4
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.1e-40 171.4 134 61.9
Cpa.g.sc63.3 Carica papaya HOM05D006509 ORTHO05D008144 7.3e-40 168.7 166 53.0
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 4.8e-39 166.0 152 53.3
ECA246G0117 Erigeron canadensis HOM05D006509 ORTHO05D008144 1.2e-37 161.4 131 61.8
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 2.6e-37 160.2 134 59.0
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 2.2e-36 157.1 132 55.3
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.9e-32 144.1 111 55.0
AUR62018171 Chenopodium quinoa HOM05D006509 ORTHO05D008144 1.3e-31 141.4 188 46.8
Cc00_g35200 Coffea canephora HOM05D006509 ORTHO05D008144 1.6e-31 141.0 197 44.7
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 5.5e-27 125.9 129 48.8
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 4.8e-23 112.8 194 36.6
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 7.6e-21 105.5 106 52.8
FAN01G0805 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.3e-17 94.0 64 73.4
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 3.2e-11 73.6 73 50.7
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 1.6e-10 71.2 73 46.6


User provided reference genes

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