Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 3.7e-134 481.5 234 100.0
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 8.5e-131 470.3 234 97.9
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 9.3e-85 317.4 237 71.7
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 9.3e-85 317.4 232 72.4
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 8.7e-83 310.8 238 70.6
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 2.5e-82 309.3 238 71.4
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 5.6e-82 308.1 236 71.2
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 4.8e-81 305.1 236 70.8
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 2.4e-80 302.8 234 67.9
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 6.9e-80 301.2 235 71.5
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 2.6e-79 299.3 239 66.9
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.6e-79 299.3 239 66.9
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 5.8e-79 298.1 239 70.3
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 9.9e-79 297.4 239 66.9
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 2.2e-78 296.2 238 69.7
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 2.2e-78 296.2 235 69.8
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 3.2e-77 292.4 237 67.9
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 5.4e-77 291.6 238 68.5
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 1.6e-76 290.0 234 68.4
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 1.3e-75 287.0 238 63.9
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 3.3e-74 282.3 241 63.5
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 2.1e-73 279.6 254 64.2
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 2.1e-73 279.6 235 66.0
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 1.1e-72 277.3 236 64.4
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 1.8e-72 276.6 235 65.1
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 3.1e-72 275.8 234 65.8
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 5.3e-72 275.0 235 64.3
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 5.3e-72 275.0 233 66.1
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 9.0e-72 274.2 243 61.7
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.2e-71 273.9 232 65.1
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 1.5e-71 273.5 236 63.6
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 2.6e-71 272.7 233 64.4
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 4.5e-71 271.9 240 62.1
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 4.5e-71 271.9 235 62.6
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 4.5e-71 271.9 235 64.3
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 9.9e-71 270.8 227 65.6
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.3e-70 270.4 175 77.1
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.2e-70 269.6 232 64.7
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 2.2e-70 269.6 236 63.6
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 2.2e-70 269.6 237 65.0
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 6.4e-70 268.1 176 76.7
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 8.4e-70 267.7 236 63.6
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 8.4e-70 267.7 170 78.2
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 8.4e-70 267.7 237 64.6
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 1.1e-69 267.3 234 64.5
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 1.4e-69 266.9 232 62.9
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.4e-69 266.9 216 68.1
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 1.4e-69 266.9 241 59.8
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 2.4e-69 266.2 176 77.3
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.2e-68 263.8 176 76.7
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.2e-68 263.8 170 78.8
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 2.1e-68 263.1 236 63.1
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 5.1e-67 258.5 226 63.3
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 5.1e-67 258.5 226 63.3
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 1.1e-66 257.3 170 75.9
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 1.1e-66 257.3 228 62.7
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.1e-66 257.3 195 68.7
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 1.9e-66 256.5 226 61.5
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 3.3e-66 255.8 210 70.0
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 9.6e-66 254.2 199 68.8
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 3.7e-65 252.3 236 61.9
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 4.8e-65 251.9 235 60.4
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 4.8e-65 251.9 235 60.4
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 6.2e-65 251.5 236 60.6
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 6.2e-65 251.5 234 60.7
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.1e-64 250.8 238 61.3
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.1e-64 250.8 238 61.3
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.1e-64 250.8 238 61.3
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 1.4e-64 250.4 238 60.9
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 1.8e-64 250.0 237 61.6
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 2.4e-64 249.6 207 66.2
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 6.9e-64 248.1 222 64.0
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 1.5e-63 246.9 237 59.9
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 1.5e-63 246.9 164 76.2
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 4.5e-63 245.4 237 59.1
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 7.6e-63 244.6 157 78.3
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 3.8e-62 242.3 235 59.6
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 3.8e-62 242.3 235 59.6
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.1e-61 240.7 234 59.0
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 4.2e-61 238.8 128 88.3
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 7.1e-61 238.0 131 84.7
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.5e-58 230.3 165 70.9
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 1.5e-58 230.3 165 70.9
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 1.6e-57 226.9 147 78.9
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 1.6e-57 226.9 128 83.6
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.4e-56 223.0 157 68.2
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.7e-54 216.9 221 58.4
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.1e-53 214.2 179 65.4
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 2.5e-53 213.0 187 59.4
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 3.6e-52 209.1 157 66.2
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 6.1e-52 208.4 125 79.2
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 3.9e-51 205.7 144 71.5
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 7.4e-50 201.4 240 52.9
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 4.8e-49 198.7 192 55.2
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 4.1e-48 195.7 141 73.0
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 1.5e-47 193.7 235 51.5
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 3.6e-44 182.6 168 60.1
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 1.2e-39 167.5 235 48.1
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 1.1e-37 161.0 187 51.3
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 9.4e-37 157.9 130 64.6
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 1.2e-36 157.5 139 55.4
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 3.7e-25 119.4 167 45.5
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.0e-23 113.6 56 94.6
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 5.0e-22 109.0 84 69.0
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.6e-20 104.0 58 82.8
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 2.8e-17 93.2 146 37.7
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 3.7e-17 92.8 65 70.8
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.0e-14 84.7 140 32.1
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 1.5e-10 70.9 45 80.0
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 9.8e-10 68.2 101 36.6
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 1.3e-09 67.8 45 77.8


User provided reference genes

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