Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G169300 Populus trichocarpa HOM05D007096 ORTHO05D008288 1.9e-44 182.2 94 100.0
Sabra10G0129100 Salix brachista HOM05D007096 ORTHO05D008288 1.6e-35 152.5 94 84.0
Potri.008G086100 Populus trichocarpa HOM05D007096 ORTHO05D008288 5.6e-33 144.1 94 78.7
Sabra08G0063800 Salix brachista HOM05D007096 ORTHO05D008288 8.1e-32 140.2 92 77.2
Manes.05G101400 Manihot esculenta HOM05D007096 ORTHO05D008288 8.2e-24 113.6 95 65.3
TAR629G1384 Trochodendron aralioides HOM05D000618 ORTHO05D000454 2.5e-20 102.1 87 62.1
Haze_12011 Corylus avellana HOM05D007096 ORTHO05D008288 7.1e-20 100.5 95 56.8
Ciclev10033178m.g Citrus clementina HOM05D007096 ORTHO05D008288 2.1e-19 99.0 96 57.3
Cfa008979 Carpinus fangiana HOM05D007096 ORTHO05D008288 2.7e-19 98.6 95 56.8
Thecc.02G346100 Theobroma cacao HOM05D007096 ORTHO05D008288 2.7e-19 98.6 97 55.7
Manes.01G185500 Manihot esculenta HOM05D007096 ORTHO05D008288 1.0e-18 96.7 95 58.9
TAR371G0768 Trochodendron aralioides HOM05D007096 ORTHO05D008288 1.5e-17 92.8 94 54.3
CSS0036898 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 1.9e-17 92.4 92 54.3
CSS0038022 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 1.9e-17 92.4 92 54.3
Nn3g17242 Nelumbo nucifera HOM05D007096 ORTHO05D008288 4.3e-17 91.3 93 48.4
CiPaw.06G085100 Carya illinoinensis HOM05D007096 ORTHO05D008288 9.7e-17 90.1 95 52.6
CiPaw.05G135100 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.2e-16 89.0 95 52.6
Prupe.1G274800 Prunus persica HOM05D007096 ORTHO05D008288 2.2e-16 89.0 98 54.1
Eucgr.B03446 Eucalyptus grandis HOM05D007096 ORTHO05D008288 1.1e-15 86.7 94 51.1
Gohir.A12G165100 Gossypium hirsutum HOM05D007096 ORTHO05D008288 5.3e-15 84.3 95 53.7
Nn4g23168 Nelumbo nucifera HOM05D007096 ORTHO05D008288 6.9e-15 84.0 93 50.5
Gohir.D12G168200 Gossypium hirsutum HOM05D007096 ORTHO05D008288 9.0e-15 83.6 95 52.6
Gorai.008G181100 Gossypium raimondii HOM05D007096 ORTHO05D008288 9.0e-15 83.6 95 52.6
TAR622G0633 Trochodendron aralioides HOM05D000618 ORTHO05D000454 9.0e-15 83.6 99 49.5
Gorai.009G324600 Gossypium raimondii HOM05D007096 ORTHO05D008288 3.4e-14 81.6 97 48.5
Gohir.D05G304900 Gossypium hirsutum HOM05D007096 ORTHO05D008288 4.5e-14 81.3 97 48.5
CSS0030953 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 1.3e-13 79.7 96 52.1
Lalb_Chr04g0256051 Lupinus albus HOM05D015099 ORTHO05D008288 1.7e-13 79.3 96 49.0
TAR374G0516 Trochodendron aralioides HOM05D007096 ORTHO05D008288 2.2e-13 79.0 89 48.3
RcHm_v2.0_Chr4g0439851 Rosa chinensis HOM05D007096 ORTHO05D008288 3.8e-13 78.2 96 51.0
Rhsim12G0063900 Rhododendron simsii HOM05D007096 ORTHO05D008288 5.0e-13 77.8 104 46.2
Duzib268G0913 Durio zibethinus HOM05D007096 ORTHO05D008288 8.5e-13 77.0 97 48.5
Gohir.A05G183700 Gossypium hirsutum HOM05D007096 ORTHO05D008288 8.5e-13 77.0 97 46.4
DCAR_031024 Daucus carota HOM05D007096 ORTHO05D008288 1.9e-12 75.9 95 46.3
CSS0038065 Camellia sinensis var. sinensis HOM05D007096 ORTHO05D008288 2.5e-12 75.5 92 48.9
Lalb_Chr10g0098271 Lupinus albus HOM05D015099 ORTHO05D008288 4.2e-12 74.7 88 45.5
Prupe.5G193600 Prunus persica HOM05D007096 ORTHO05D008288 2.1e-11 72.4 94 44.7
RcHm_v2.0_Chr7g0181441 Rosa chinensis HOM05D007096 ORTHO05D008288 3.6e-11 71.6 85 49.4
Manes.14G078100 Manihot esculenta HOM05D007096 ORTHO05D008288 6.1e-11 70.9 94 43.6
Thecc.03G087500 Theobroma cacao HOM05D007096 ORTHO05D008288 6.1e-11 70.9 96 47.9
Nitab4.5_0000145g0050 Nicotiana tabacum HOM05D007096 ORTHO05D008288 7.9e-11 70.5 91 45.1
Atru.chr9.225 Acer truncatum HOM05D007096 ORTHO05D008288 1.0e-10 70.1 84 47.6
Ah.02g129680 Amaranthus hybridus HOM05D007096 ORTHO05D008288 1.0e-10 70.1 95 43.2
Glyma.02G107400 Glycine max HOM05D015099 ORTHO05D008288 1.0e-10 70.1 107 43.9
FAN13G0716 Fragaria x ananassa HOM05D007096 ORTHO05D008288 1.8e-10 69.3 83 48.2
Gohir.D04G191800 Gossypium hirsutum HOM05D007096 ORTHO05D008288 2.3e-10 68.9 96 45.8
FAN08G2460 Fragaria x ananassa HOM05D007096 ORTHO05D008288 3.0e-10 68.6 83 48.2
CsaV3_1G005510 Cucumis sativus L. HOM05D007096 ORTHO05D008288 8.8e-10 67.0 95 44.2
Gohir.A04G147500 Gossypium hirsutum HOM05D007096 ORTHO05D008288 8.8e-10 67.0 96 45.8
Gorai.012G187200 Gossypium raimondii HOM05D007096 ORTHO05D008288 1.1e-09 66.6 96 44.8
Oeu054876.1 Olea europaea HOM05D007096 ORTHO05D008288 1.1e-09 66.6 99 44.4
Ciclev10023845m.g Citrus clementina HOM05D007096 ORTHO05D008288 1.5e-09 66.2 88 42.0
Cc00_g23090 Coffea canephora HOM05D007096 ORTHO05D008288 1.5e-09 66.2 95 46.3
Gohir.D02G125800 Gossypium hirsutum HOM05D007096 ORTHO05D008288 1.5e-09 66.2 95 44.2
Peaxi162Scf00222g00814 Petunia axillaris HOM05D007096 ORTHO05D008288 2.0e-09 65.9 78 47.4
Gorai.005G141500 Gossypium raimondii HOM05D007096 ORTHO05D008288 2.5e-09 65.5 95 44.2
CiPaw.11G044600 Carya illinoinensis HOM05D007096 ORTHO05D008288 3.3e-09 65.1 88 46.6
QL10p017020 Quercus lobata HOM05D007096 ORTHO05D008288 4.3e-09 64.7 90 43.3
COL.COLO4_23015 Corchorus olitorius HOM05D007096 ORTHO05D008288 5.7e-09 64.3 79 54.4
Peaxi162Scf00911g00042 Petunia axillaris HOM05D007096 ORTHO05D008288 7.4e-09 63.9 93 40.9
PGSC0003DMG400023201 Solanum tuberosum HOM05D007096 ORTHO05D008288 7.4e-09 63.9 96 41.7
Migut.L01293 Erythranthe guttata HOM05D007096 ORTHO05D008288 9.7e-09 63.5 98 41.8
Eucgr.G02504 Eucalyptus grandis HOM05D007096 ORTHO05D008288 9.7e-09 63.5 89 42.7
COL.COLO4_09292 Corchorus olitorius HOM05D007096 ORTHO05D008288 1.3e-08 63.2 93 43.0
VMungo1215G2026 Vigna mungo HOM05D015099 ORTHO05D008288 1.3e-08 63.2 104 38.5
Lj4g0000471 Lotus japonicus HOM05D007096 ORTHO05D008288 1.7e-08 62.8 90 45.6
CiPaw.12G013300 Carya illinoinensis HOM05D007096 ORTHO05D008288 2.2e-08 62.4 94 41.5
Gohir.A03G101000 Gossypium hirsutum HOM05D007096 ORTHO05D008288 2.2e-08 62.4 95 43.2
ClCG04G012240 Citrullus lanatus HOM05D007096 ORTHO05D008288 2.8e-08 62.0 90 45.6
Oeu047297.1 Olea europaea HOM05D007096 ORTHO05D008288 2.8e-08 62.0 92 39.1
Manes.06G092300 Manihot esculenta HOM05D007096 ORTHO05D008288 3.7e-08 61.6 96 40.6
DCAR_016556 Daucus carota HOM05D007096 ORTHO05D008288 4.8e-08 61.2 88 43.2
Glyma.06G194000 Glycine max HOM05D007096 ORTHO05D008288 4.8e-08 61.2 95 42.1
Glyma.17G100200 Glycine max HOM05D007096 ORTHO05D008288 4.8e-08 61.2 98 43.9
Lsat_1_v5_gn_9_15420 Lactuca sativa HOM05D007096 ORTHO05D008288 6.3e-08 60.8 96 38.5
Sp5g24710 Schrenkiella parvula HOM05D009494 ORTHO05D011604 6.3e-08 60.8 115 34.8
Phvul.002G085300 Phaseolus vulgaris HOM05D015099 ORTHO05D008288 8.2e-08 60.5 109 40.4
A02p15990 Brassica napus HOM05D009494 ORTHO05D011604 1.1e-07 60.1 117 34.2
BraA02t06659Z Brassica rapa HOM05D009494 ORTHO05D011604 1.1e-07 60.1 111 36.9
ClCG11G009950 Citrullus lanatus HOM05D007096 ORTHO05D008288 1.4e-07 59.7 96 41.7
MELO3C001984.2 Cucumis melo HOM05D007096 ORTHO05D008288 1.4e-07 59.7 86 41.9
Phvul.009G187200 Phaseolus vulgaris HOM05D007096 ORTHO05D008288 1.4e-07 59.7 94 37.2
BraA07t30782Z Brassica rapa HOM05D009494 ORTHO05D011604 1.8e-07 59.3 75 44.0
Glyma.04G169400 Glycine max HOM05D007096 ORTHO05D008288 1.8e-07 59.3 94 39.4
BcaC03g15096 Brassica carinata HOM05D009494 ORTHO05D011604 2.4e-07 58.9 117 33.3
C02p26570 Brassica napus HOM05D009494 ORTHO05D011604 2.4e-07 58.9 117 33.3
C06p36810 Brassica napus HOM05D009494 ORTHO05D011604 2.4e-07 58.9 75 42.7
BolC2t08728H Brassica oleracea HOM05D009494 ORTHO05D011604 2.4e-07 58.9 117 33.3
Carub.0002s1626 Capsella rubella HOM05D009494 ORTHO05D011604 2.4e-07 58.9 115 34.8
Lj1g0007220 Lotus japonicus HOM05D007096 ORTHO05D008288 2.4e-07 58.9 89 43.8
BcaC08g45881 Brassica carinata HOM05D009494 ORTHO05D011604 4.1e-07 58.2 75 42.7
A07p31500 Brassica napus HOM05D009494 ORTHO05D011604 4.1e-07 58.2 110 35.5
BolC6t38790H Brassica oleracea HOM05D009494 ORTHO05D011604 4.1e-07 58.2 75 42.7
BcaB03g15485 Brassica carinata HOM05D009494 ORTHO05D011604 6.9e-07 57.4 75 42.7
THA.LOC104822126 Tarenaya hassleriana HOM05D009494 ORTHO05D011604 6.9e-07 57.4 116 35.3
Aa31LG4G11160 Aethionema arabicum HOM05D009494 ORTHO05D011604 9.1e-07 57.0 116 37.9
Sed0025401 Sechium edule HOM05D007096 ORTHO05D008288 1.2e-06 56.6 92 43.5
BcaB05g24463 Brassica carinata HOM05D009494 ORTHO05D011604 1.5e-06 56.2 118 32.2
Thhalv10019320m.g Eutrema salsugineum HOM05D009494 ORTHO05D011604 1.5e-06 56.2 116 37.1
Sed0002990 Sechium edule HOM05D007096 ORTHO05D008288 2.6e-06 55.5 94 37.2
CsaV3_2G010680 Cucumis sativus L. HOM05D007096 ORTHO05D008288 5.9e-06 54.3 97 41.2


User provided reference genes

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