Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G164400 Populus trichocarpa HOM05D006796 ORTHO05D008615 6.4e-152 540.8 291 100.0
Sabra10G0124800 Salix brachista HOM05D006796 ORTHO05D008615 9.6e-140 500.4 291 94.5
Manes.05G105900 Manihot esculenta HOM05D006796 ORTHO05D008615 3.7e-115 418.7 295 78.0
arahy.Tifrunner.gnm1.ann1.R8NX8D Arachis hypogaea HOM05D006796 ORTHO05D008615 1.7e-104 383.3 298 70.1
TWI31G0717 Tripterygium wilfordii HOM05D006796 ORTHO05D008615 1.7e-104 383.3 294 72.1
arahy.Tifrunner.gnm1.ann1.NP20FV Arachis hypogaea HOM05D006796 ORTHO05D008615 2.2e-104 382.9 299 70.2
Atru.chr11.1722 Acer truncatum HOM05D006796 ORTHO05D008615 5.0e-104 381.7 295 73.6
GSVIVG01012496001 Vitis vinifera HOM05D006796 ORTHO05D008615 2.5e-103 379.4 301 71.1
CiPaw.07G071700 Carya illinoinensis HOM05D006796 ORTHO05D008615 4.2e-103 378.6 299 70.6
Nn4g23271 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.5e-103 378.3 296 73.3
VMungo1215G0648 Vigna mungo HOM05D006796 ORTHO05D008615 3.6e-102 375.6 295 72.2
Haze_11961 Corylus avellana HOM05D006796 ORTHO05D008615 6.1e-102 374.8 315 68.6
Phvul.002G103200 Phaseolus vulgaris HOM05D006796 ORTHO05D008615 1.4e-101 373.6 296 71.3
Cpa.g.sc1.63 Carica papaya HOM05D006796 ORTHO05D008615 5.1e-101 371.7 288 72.2
TAR371G0712 Trochodendron aralioides HOM05D006796 ORTHO05D008615 1.1e-100 370.5 295 72.2
Ciclev10032381m.g Citrus clementina HOM05D006796 ORTHO05D008615 4.4e-100 368.6 295 70.2
Glyma.01G052700 Glycine max HOM05D006796 ORTHO05D008615 4.4e-100 368.6 295 71.2
Prupe.1G279300 Prunus persica HOM05D006796 ORTHO05D008615 9.7e-100 367.5 297 75.4
FAN07G2185 Fragaria x ananassa HOM05D006796 ORTHO05D008615 1.7e-99 366.7 292 70.9
Duzib268G1785 Durio zibethinus HOM05D006796 ORTHO05D008615 2.8e-99 365.9 297 69.0
Dinv34092 Davidia involucrata HOM05D006796 ORTHO05D008615 4.8e-99 365.2 322 66.8
FvH4_4g30770 Fragaria vesca HOM05D006796 ORTHO05D008615 4.8e-99 365.2 292 73.6
Gorai.012G186400 Gossypium raimondii HOM05D006796 ORTHO05D008615 6.3e-99 364.8 300 68.0
FAN22G2031 Fragaria x ananassa HOM05D006796 ORTHO05D008615 8.2e-99 364.4 292 73.6
Glyma.02G111300 Glycine max HOM05D006796 ORTHO05D008615 8.2e-99 364.4 294 70.4
Thecc.02G339900 Theobroma cacao HOM05D006796 ORTHO05D008615 2.4e-98 362.8 295 69.2
Cc11_g12630 Coffea canephora HOM05D006796 ORTHO05D008615 5.3e-98 361.7 297 69.0
ClCG09G022060 Citrullus lanatus HOM05D006796 ORTHO05D008615 9.1e-98 360.9 297 68.4
FAN12G1163 Fragaria x ananassa HOM05D006796 ORTHO05D008615 9.1e-98 360.9 292 72.9
Actinidia19934 Actinidia chinensis HOM05D006796 ORTHO05D008615 2.6e-97 359.4 291 68.4
CANSAT64G1871 Cannabis sativa HOM05D006796 ORTHO05D008615 2.6e-97 359.4 301 70.8
CsaV3_5G022970 Cucumis sativus L. HOM05D006796 ORTHO05D008615 4.5e-97 358.6 295 67.5
Lj2g0006920 Lotus japonicus HOM05D006796 ORTHO05D008615 4.5e-97 358.6 292 67.5
CSS0026382 Camellia sinensis var. sinensis HOM05D006796 ORTHO05D008615 5.9e-97 358.2 297 68.0
Gohir.D04G191000 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.9e-97 358.2 302 67.2
Ca_04876_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 7.7e-97 357.8 294 66.7
RcHm_v2.0_Chr4g0439161 Rosa chinensis HOM05D006796 ORTHO05D008615 7.7e-97 357.8 292 72.3
CAN.G964.30 Capsicum annuum HOM05D006796 ORTHO05D008615 2.9e-96 355.9 295 66.8
Psat2g126440 Pisum sativum HOM05D006796 ORTHO05D008615 2.9e-96 355.9 293 67.2
TAR629G0550 Trochodendron aralioides HOM05D006796 ORTHO05D008615 5.0e-96 355.1 293 66.9
Nitab4.5_0000391g0260 Nicotiana tabacum HOM05D006796 ORTHO05D008615 4.2e-95 352.1 291 67.7
Lalb_Chr10g0098461 Lupinus albus HOM05D006796 ORTHO05D008615 1.2e-94 350.5 297 66.3
PGSC0003DMG400028345 Solanum tuberosum HOM05D006796 ORTHO05D008615 1.2e-94 350.5 296 69.3
Sc11g0002140 Simmondsia chinensis HOM05D006796 ORTHO05D008615 1.8e-93 346.7 285 66.3
Eucgr.B03198 Eucalyptus grandis HOM05D006796 ORTHO05D008615 3.9e-93 345.5 291 67.4
MSTRG.13431 Avicennia marina HOM05D006796 ORTHO05D008615 5.2e-93 345.1 295 66.1
Gohir.D04G190901 Gossypium hirsutum HOM05D006796 ORTHO05D008615 5.2e-93 345.1 293 66.2
Sopen05g007830 Solanum pennellii HOM05D006796 ORTHO05D008615 1.1e-92 344.0 297 69.0
Lj3A1033T56 Lonicera japonica HOM05D006796 ORTHO05D008615 1.5e-92 343.6 296 67.2
SalBow8G2627 Salvia bowleyana HOM05D006796 ORTHO05D008615 2.6e-92 342.8 295 67.1
TPR.G19931 Trifolium pratense HOM05D006796 ORTHO05D008615 2.6e-92 342.8 291 65.6
Migut.L01249 Erythranthe guttata HOM05D006796 ORTHO05D008615 4.4e-92 342.0 294 66.7
MELO3C002984.2 Cucumis melo HOM05D006796 ORTHO05D008615 1.7e-91 340.1 331 60.1
CARHR014360 Cardamine hirsuta HOM05D006796 ORTHO05D008615 2.2e-91 339.7 290 67.9
PGR102G1583 Punica granatum HOM05D006796 ORTHO05D008615 2.8e-91 339.3 294 67.0
CiPaw.05G129900 Carya illinoinensis HOM05D006796 ORTHO05D008615 3.7e-91 339.0 299 66.6
Peaxi162Scf00222g00236 Petunia axillaris HOM05D006796 ORTHO05D008615 6.3e-91 338.2 289 67.1
Hma1.2p1_0354F.1_g133830 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 1.1e-90 337.4 203 82.8
Cfa008932 Carpinus fangiana HOM05D006796 ORTHO05D008615 1.4e-90 337.0 425 51.8
EL10Ac6g13260 Beta vulgaris HOM05D006796 ORTHO05D008615 4.1e-90 335.5 288 66.7
Hund25209 Selenicereus undatus HOM05D006796 ORTHO05D008615 4.1e-90 335.5 290 66.9
MD13G1068600 Malus domestica HOM05D006796 ORTHO05D008615 1.6e-89 333.6 201 83.1
MD16G1067400 Malus domestica HOM05D006796 ORTHO05D008615 2.0e-89 333.2 290 70.0
AUR62032832 Chenopodium quinoa HOM05D006796 ORTHO05D008615 4.5e-89 332.0 291 65.3
THA.LOC104805179 Tarenaya hassleriana HOM05D006796 ORTHO05D008615 1.1e-87 327.4 290 64.5
Aqoxy3G00482 Aquilegia oxysepala HOM05D006796 ORTHO05D008615 2.5e-87 326.2 302 61.6
PSO017G7370 Papaver somniferum HOM05D006796 ORTHO05D008615 4.2e-87 325.5 201 80.6
Thhalv10008453m.g Eutrema salsugineum HOM05D006796 ORTHO05D008615 2.7e-86 322.8 288 64.9
PSO478G1165 Papaver somniferum HOM05D006796 ORTHO05D008615 2.7e-86 322.8 291 65.3
AL1G25830 Arabidopsis lyrata HOM05D006796 ORTHO05D008615 8.0e-86 321.2 288 67.7
AT1G13990 Arabidopsis thaliana HOM05D006796 ORTHO05D008615 1.0e-85 320.9 291 66.0
MSTRG.2332 Avicennia marina HOM05D006796 ORTHO05D008615 1.4e-85 320.5 234 70.5
SGA_v2.0_scaffold63G21639 Striga asiatica HOM05D006796 ORTHO05D008615 3.0e-85 319.3 307 61.9
Aa31LG1G1040 Aethionema arabicum HOM05D006796 ORTHO05D008615 5.2e-85 318.5 333 58.3
ECA234G4054 Erigeron canadensis HOM05D006796 ORTHO05D008615 1.2e-84 317.4 208 77.4
Lsat_1_v5_gn_4_10660 Lactuca sativa HOM05D006796 ORTHO05D008615 2.0e-84 316.6 302 62.6
Oeu055099.3 Olea europaea HOM05D006796 ORTHO05D008615 4.4e-84 315.5 353 54.4
CDE02G1750 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 2.2e-83 313.2 294 60.5
Carub.0001s1368 Capsella rubella HOM05D006796 ORTHO05D008615 2.8e-83 312.8 288 64.9
COL.COLO4_27978 Corchorus olitorius HOM05D006796 ORTHO05D008615 3.1e-82 309.3 297 61.6
ATR0564G337 Amborella trichopoda HOM05D006796 ORTHO05D008615 9.1e-82 307.8 198 78.3
AUR62005838 Chenopodium quinoa HOM05D006796 ORTHO05D008615 1.2e-81 307.4 287 62.7
C05p11750 Brassica napus HOM05D006796 ORTHO05D008615 2.7e-81 306.2 199 78.4
BolC5t29921H Brassica oleracea HOM05D006796 ORTHO05D008615 2.2e-80 303.1 304 61.8
BcaC05g25295 Brassica carinata HOM05D006796 ORTHO05D008615 2.9e-80 302.8 288 60.8
BraA06t24185Z Brassica rapa HOM05D006796 ORTHO05D008615 6.8e-77 291.6 317 59.0
HPP92_016903 Vanilla planifolia HOM05D006796 ORTHO05D008615 7.5e-76 288.1 206 68.4
QL03p069702 Quercus lobata HOM05D006796 ORTHO05D008615 3.7e-75 285.8 156 89.7
Os03g0168200 Oryza sativa ssp. japonica HOM05D006796 ORTHO05D008615 5.4e-74 282.0 195 71.3
vmacro01347 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 7.0e-74 281.6 321 55.1
Zm00001eb402440 Zea mays HOM05D006796 ORTHO05D008615 2.0e-73 280.0 200 70.0
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 5.9e-73 278.5 290 56.6
Potri.008G090900 Populus trichocarpa HOM05D006796 ORTHO05D008615 7.2e-71 271.6 293 58.7
Sed0012383 Sechium edule HOM05D006796 ORTHO05D008615 9.8e-68 261.2 250 60.0
Nitab4.5_0004906g0020 Nicotiana tabacum HOM05D006796 ORTHO05D008615 1.7e-67 260.4 154 82.5
Mapoly0042s0065 Marchantia polymorpha HOM05D006796 ORTHO05D008615 7.0e-66 255.0 216 62.0
A06p09990 Brassica napus HOM05D006796 ORTHO05D008615 5.9e-65 251.9 324 53.4
HanXRQChr12g0379181 Helianthus annuus HOM05D006796 ORTHO05D008615 3.3e-63 246.1 257 58.0
arahy.Tifrunner.gnm1.ann1.T4YGUP Arachis hypogaea HOM05D006796 ORTHO05D008615 6.8e-61 238.4 161 76.4
Actinidia31964 Actinidia chinensis HOM05D006796 ORTHO05D008615 1.5e-55 220.7 133 85.7
Gohir.1Z049816 Gossypium hirsutum HOM05D006796 ORTHO05D008615 3.6e-54 216.1 131 82.4
Medtr5g042520 Medicago truncatula HOM05D006796 ORTHO05D008615 2.9e-51 206.5 216 57.9
SMO271G0176 Selaginella moellendorffii HOM05D006796 ORTHO05D008615 7.3e-47 191.8 211 52.6
CBR_g41640 Chara braunii HOM05D006796 ORTHO05D008615 9.5e-47 191.4 235 47.2
Hma1.2p1_0354F.1_g133820 Hydrangea macrophylla HOM05D006796 ORTHO05D008615 4.1e-42 176.0 107 80.4
Solyc05g013060.4 Solanum lycopersicum HOM05D006796 ORTHO05D008615 6.0e-41 172.2 186 62.4
Rhsim12G0078900 Rhododendron simsii HOM05D006796 ORTHO05D008615 1.9e-39 167.2 412 35.9
AagrBONN_evm.TU.Sc2ySwM_344.1473 Anthoceros agrestis HOM05D006796 ORTHO05D008615 1.3e-32 144.4 149 55.7
CDE09G0941 Ceratophyllum demersum HOM05D006796 ORTHO05D008615 4.4e-28 129.4 80 76.2
Nn2g13928 Nelumbo nucifera HOM05D006796 ORTHO05D008615 4.4e-28 129.4 96 68.8
Oeu021077.1 Olea europaea HOM05D006796 ORTHO05D008615 1.9e-26 124.0 293 36.9
SEGI_14917 Sequoiadendron giganteum HOM05D006796 ORTHO05D008615 2.5e-23 113.6 75 73.3
vmacro01341 Vaccinium macrocarpon HOM05D006796 ORTHO05D008615 1.5e-20 104.4 236 39.4
Nn2g11199 Nelumbo nucifera HOM05D006796 ORTHO05D008615 5.3e-13 79.3 61 67.2
Gohir.A12G247950 Gossypium hirsutum HOM05D006796 ORTHO05D008615 2.0e-12 77.4 53 69.8
PRCOL_00001264 Prasinoderma coloniale HOM05D006796 ORTHO05D008615 1.7e-11 74.3 225 28.9
SalBow1G4829 Salvia bowleyana HOM05D006796 ORTHO05D000018 2.2e-11 73.9 55 67.3
Ca_27564_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 3.3e-07 60.1 38 73.7
Ca_28040_v3 Cicer arietinum L. HOM05D006796 ORTHO05D008615 1.3e-06 58.2 37 70.3
Ca_04476_v3 Cicer arietinum L. HOM05D003588 ORTHO05D004252 1.6e-06 57.8 34 79.4
Ca_03868_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.8e-06 56.2 37 70.3


User provided reference genes

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