Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G161600 Populus trichocarpa HOM05D002318 ORTHO05D008744 5.5e-195 684.1 343 100.0
Sabra10G0122900 Salix brachista HOM05D002318 ORTHO05D008744 1.3e-175 619.8 343 91.5
Atru.chr11.1690 Acer truncatum HOM05D002318 ORTHO05D008744 1.1e-142 510.4 335 76.7
Cfa008908 Carpinus fangiana HOM05D002318 ORTHO05D008744 1.0e-140 503.8 340 75.6
TWI75G0802 Tripterygium wilfordii HOM05D002318 ORTHO05D008744 3.9e-140 501.9 342 74.3
Haze_11934 Corylus avellana HOM05D002318 ORTHO05D008744 1.9e-139 499.6 340 75.0
MD16G1064900 Malus domestica HOM05D002318 ORTHO05D008744 3.3e-139 498.8 344 75.0
CiPaw.05G128000 Carya illinoinensis HOM05D002318 ORTHO05D008744 4.3e-139 498.4 335 76.4
QL03p070830 Quercus lobata HOM05D002318 ORTHO05D008744 9.6e-139 497.3 340 74.4
TAR622G0636 Trochodendron aralioides HOM05D002318 ORTHO05D004713 1.6e-138 496.5 334 74.9
COL.COLO4_27936 Corchorus olitorius HOM05D002318 ORTHO05D008744 2.4e-137 492.7 340 74.1
Thecc.02G336500 Theobroma cacao HOM05D002318 ORTHO05D008744 9.0e-137 490.7 338 73.7
Cpa.g.sc1.87 Carica papaya HOM05D002318 ORTHO05D008744 1.3e-135 486.9 338 74.6
GSVIVG01012177001 Vitis vinifera HOM05D002318 ORTHO05D008744 2.2e-135 486.1 345 73.0
RcHm_v2.0_Chr4g0438871 Rosa chinensis HOM05D002318 ORTHO05D008744 2.1e-133 479.6 330 74.2
Gorai.013G091200 Gossypium raimondii HOM05D002318 ORTHO05D008744 3.0e-132 475.7 341 70.7
PGR119G0925 Punica granatum HOM05D002318 ORTHO05D008744 6.6e-132 474.6 336 71.4
FAN07G2980 Fragaria x ananassa HOM05D002318 ORTHO05D004713 8.7e-132 474.2 340 71.8
FAN22G0051 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.1e-131 473.8 340 72.1
Duzib268G0798 Durio zibethinus HOM05D002318 ORTHO05D008744 5.6e-131 471.5 338 71.6
Eucgr.G02464 Eucalyptus grandis HOM05D002318 ORTHO05D008744 9.6e-131 470.7 335 71.6
Ciclev10032054m.g Citrus clementina HOM05D002318 ORTHO05D008744 1.6e-130 469.9 335 72.5
THA.LOC104805183 Tarenaya hassleriana HOM05D002318 ORTHO05D008744 1.6e-130 469.9 337 73.6
Gohir.A13G079900 Gossypium hirsutum HOM05D002318 ORTHO05D008744 4.0e-129 465.3 341 69.5
FAN17G2010 Fragaria x ananassa HOM05D002318 ORTHO05D008744 6.9e-129 464.5 351 69.5
CANSAT54G0184 Cannabis sativa HOM05D002318 ORTHO05D008744 2.2e-127 459.5 349 70.8
Sc11g0002270 Simmondsia chinensis HOM05D002318 ORTHO05D008744 3.2e-126 455.7 341 67.2
Phvul.002G069400 Phaseolus vulgaris HOM05D002318 ORTHO05D008744 4.2e-126 455.3 335 68.7
Lj2g0021077 Lotus japonicus HOM05D002318 ORTHO05D008744 1.2e-125 453.8 336 67.0
VMungo1215G2584 Vigna mungo HOM05D002318 ORTHO05D008744 2.7e-125 452.6 337 68.5
MBI16_g06774_MAGBIO Magnolia biondii HOM05D002318 ORTHO05D008744 3.5e-125 452.2 335 70.1
Lsat_1_v5_gn_8_48101 Lactuca sativa HOM05D002318 ORTHO05D004713 2.3e-124 449.5 333 67.0
Cc11_g12380 Coffea canephora HOM05D002318 ORTHO05D008744 5.1e-124 448.4 337 67.4
Sopen05g007450 Solanum pennellii HOM05D002318 ORTHO05D008744 5.1e-124 448.4 337 69.4
FAN12G0082 Fragaria x ananassa HOM05D002318 ORTHO05D008744 6.7e-124 448.0 340 69.4
PGSC0003DMG401028329 Solanum tuberosum HOM05D002318 ORTHO05D008744 8.7e-124 447.6 337 69.1
PGSC0003DMG402022110 Solanum tuberosum HOM05D002318 ORTHO05D008744 8.7e-124 447.6 337 69.1
Glyma.02G113500 Glycine max HOM05D002318 ORTHO05D008744 2.5e-123 446.0 335 68.7
Nitab4.5_0000334g0260 Nicotiana tabacum HOM05D002318 ORTHO05D008744 2.5e-123 446.0 341 68.0
TPR.G22412 Trifolium pratense HOM05D002318 ORTHO05D008744 2.5e-123 446.0 341 66.6
Aqoxy3G03551 Aquilegia oxysepala HOM05D002318 ORTHO05D008744 9.6e-123 444.1 335 68.1
Lalb_Chr17g0340981 Lupinus albus HOM05D002318 ORTHO05D008744 9.6e-123 444.1 342 67.0
MELO3C011434.2 Cucumis melo HOM05D002318 ORTHO05D008744 1.6e-122 443.4 338 66.0
CAN.G1340.13 Capsicum annuum HOM05D002318 ORTHO05D008744 4.8e-122 441.8 337 68.8
arahy.Tifrunner.gnm1.ann1.T0481B Arachis hypogaea HOM05D002318 ORTHO05D008744 1.1e-121 440.7 331 68.3
HanXRQChr12g0362851 Helianthus annuus HOM05D002318 ORTHO05D008744 1.1e-121 440.7 337 66.5
Psat2g128360 Pisum sativum HOM05D002318 ORTHO05D008744 1.4e-121 440.3 331 67.7
arahy.Tifrunner.gnm1.ann1.T5ZGHX Arachis hypogaea HOM05D002318 ORTHO05D008744 4.0e-121 438.7 313 70.9
ATR0111G011 Amborella trichopoda HOM05D002318 ORTHO05D008744 5.3e-121 438.3 319 71.8
Solyc05g012620.4 Solanum lycopersicum HOM05D002318 ORTHO05D008744 9.0e-121 437.6 274 79.2
Ca_04907_v3 Cicer arietinum L. HOM05D002318 ORTHO05D008744 1.2e-120 437.2 340 66.2
Aa31LG2G7170 Aethionema arabicum HOM05D002318 ORTHO05D008744 1.5e-120 436.8 349 65.6
Gohir.D13G079700 Gossypium hirsutum HOM05D002318 ORTHO05D008744 5.8e-120 434.9 341 66.3
CsaV3_6G032440 Cucumis sativus L. HOM05D002318 ORTHO05D008744 1.3e-119 433.7 338 64.5
AUR62043182 Chenopodium quinoa HOM05D002318 ORTHO05D008744 2.2e-119 433.0 344 65.4
Thhalv10004578m.g Eutrema salsugineum HOM05D002318 ORTHO05D008744 3.8e-119 432.2 336 68.8
Manes.01G030400 Manihot esculenta HOM05D002318 ORTHO05D008744 3.8e-119 432.2 288 79.2
CSS0013540 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 6.4e-119 431.4 284 76.1
Oeu021096.1 Olea europaea HOM05D002318 ORTHO05D008744 8.4e-119 431.0 341 66.0
Peaxi162Scf00314g00023 Petunia axillaris HOM05D002318 ORTHO05D008744 1.9e-118 429.9 381 62.5
Prupe.1G282000 Prunus persica HOM05D002318 ORTHO05D008744 7.1e-118 427.9 343 67.9
BcaC06g31184 Brassica carinata HOM05D002318 ORTHO05D008744 9.3e-118 427.6 338 68.0
CARHR145730 Cardamine hirsuta HOM05D002318 ORTHO05D008744 1.2e-117 427.2 338 68.6
AT2G03390 Arabidopsis thaliana HOM05D002318 ORTHO05D008744 1.6e-117 426.8 337 68.2
Sp2g14310 Schrenkiella parvula HOM05D002318 ORTHO05D008744 1.6e-117 426.8 336 67.3
Actinidia19922 Actinidia chinensis HOM05D002318 ORTHO05D008744 2.7e-117 426.0 335 65.1
Ah.13g073950 Amaranthus hybridus HOM05D002318 ORTHO05D008744 6.0e-117 424.9 335 64.5
AL5G13100 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.3e-116 423.7 338 67.5
AL5G13140 Arabidopsis lyrata HOM05D002318 ORTHO05D008744 1.3e-116 423.7 338 67.5
Hund05860 Selenicereus undatus HOM05D002318 ORTHO05D008744 1.3e-116 423.7 302 69.9
Migut.L01223 Erythranthe guttata HOM05D002318 ORTHO05D008744 1.8e-116 423.3 316 67.4
Carub.0005s0236 Capsella rubella HOM05D002318 ORTHO05D008744 8.7e-116 421.0 337 66.8
BcaC06g34000 Brassica carinata HOM05D002318 ORTHO05D008744 2.5e-115 419.5 274 78.1
BraA06t27203Z Brassica rapa HOM05D002318 ORTHO05D008744 4.8e-114 415.2 338 67.5
C07p33850 Brassica napus HOM05D002318 ORTHO05D008744 5.3e-113 411.8 276 77.9
DCAR_027449 Daucus carota HOM05D002318 ORTHO05D008744 5.3e-113 411.8 273 75.1
Rhsim12G0076700 Rhododendron simsii HOM05D002318 ORTHO05D008744 5.3e-113 411.8 316 65.8
BolC7t43899H Brassica oleracea HOM05D002318 ORTHO05D008744 1.5e-112 410.2 276 77.5
EL10As3g23350 Beta vulgaris HOM05D002318 ORTHO05D008744 2.6e-112 409.5 372 58.9
ClCG08G010240 Citrullus lanatus HOM05D002318 ORTHO05D008744 2.6e-112 409.5 381 58.5
ECA233G4874 Erigeron canadensis HOM05D002318 ORTHO05D008744 6.5e-111 404.8 316 65.8
Medtr5g043480 Medicago truncatula HOM05D002318 ORTHO05D008744 3.2e-110 402.5 339 61.9
vmacro01330 Vaccinium macrocarpon HOM05D002318 ORTHO05D008744 4.6e-109 398.7 337 60.5
CDE04G0061 Ceratophyllum demersum HOM05D002318 ORTHO05D008744 1.6e-106 390.2 308 65.9
Dinv34114 Davidia involucrata HOM05D002318 ORTHO05D008744 1.8e-105 386.7 275 73.5
SalBow2G2755 Salvia bowleyana HOM05D002318 ORTHO05D008744 3.1e-105 386.0 315 62.5
AUR62038089 Chenopodium quinoa HOM05D002318 ORTHO05D008744 1.5e-104 383.6 344 59.9
Hma1.2p1_0354F.1_g133650 Hydrangea macrophylla HOM05D002318 ORTHO05D008744 5.0e-103 378.6 288 67.0
Nn3g17371 Nelumbo nucifera HOM05D002318 ORTHO05D008744 2.5e-102 376.3 293 68.9
Os08g0172200 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 1.6e-101 373.6 295 64.4
FvH4_4g30500 Fragaria vesca HOM05D002318 ORTHO05D008744 7.9e-101 371.3 275 70.9
unitig_22.g6902 Utricularia gibba HOM05D002318 ORTHO05D008744 8.2e-98 361.3 290 64.5
SEGI_16280 Sequoiadendron giganteum HOM05D002318 ORTHO05D008744 5.0e-95 352.1 277 66.1
Mapoly0001s0530 Marchantia polymorpha HOM05D002318 ORTHO05D008744 6.7e-92 341.7 256 66.8
Lj6C782T15 Lonicera japonica HOM05D002318 ORTHO05D008744 8.8e-92 341.3 321 56.7
A06p43150 Brassica napus HOM05D002318 ORTHO05D008744 1.8e-89 333.6 291 65.6
Sed0004708 Sechium edule HOM05D002318 ORTHO05D008744 5.9e-88 328.6 275 63.6
SGA_v2.0_scaffold16G07752 Striga asiatica HOM05D002318 ORTHO05D008744 1.5e-83 313.9 278 58.6
Pp3c7_3960 Physcomitrium patens HOM05D002318 ORTHO05D008744 1.1e-81 307.8 251 60.6
PSO591G0040 Papaver somniferum HOM05D002318 ORTHO05D008744 9.1e-81 304.7 262 61.1
Dinv16705 Davidia involucrata HOM05D002318 ORTHO05D004713 4.2e-78 295.8 218 73.4
AagrBONN_evm.TU.Sc2ySwM_117.1985 Anthoceros agrestis HOM05D002318 ORTHO05D008744 1.2e-77 294.3 261 54.8
Actinidia31948 Actinidia chinensis HOM05D002318 ORTHO05D008744 1.0e-71 274.6 278 54.0
FAN16G1553 Fragaria x ananassa HOM05D002318 ORTHO05D008744 1.8e-65 253.8 158 79.7
CBR_g27967 Chara braunii HOM05D002318 ORTHO05D008744 3.1e-65 253.1 252 50.4
arahy.Tifrunner.gnm1.ann1.1U2S5X Arachis hypogaea HOM05D002318 ORTHO05D008744 2.7e-64 250.0 224 62.1
arahy.Tifrunner.gnm1.ann1.TF58FW Arachis hypogaea HOM05D002318 ORTHO05D008744 7.7e-64 248.4 224 61.6
CSS0007300 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 1.1e-62 244.6 195 69.2
SMO115G0105 Selaginella moellendorffii HOM05D002318 ORTHO05D008744 4.7e-61 239.2 216 54.6
Glyma.01G055000 Glycine max HOM05D002318 ORTHO05D008744 1.7e-58 230.7 160 78.8
CSS0032009 Camellia sinensis var. sinensis HOM05D002318 ORTHO05D008744 8.9e-52 208.4 219 51.1
Zm00001eb370310 Zea mays HOM05D002318 ORTHO05D008744 3.0e-47 193.4 184 58.7
Cre02.g113700 Chlamydomonas reinhardtii HOM05D002318 ORTHO05D008744 2.9e-42 176.8 280 40.0
Aa31sc734G30 Aethionema arabicum HOM05D002318 ORTHO05D008744 4.9e-42 176.0 143 71.3
PRCOL_00000845 Prasinoderma coloniale HOM05D002318 ORTHO05D008744 2.1e-40 170.6 271 36.2
Glyma.01G054950 Glycine max HOM05D002318 ORTHO05D008744 1.3e-21 108.2 59 81.4
CBR_g50304 Chara braunii HOM05D020303 ORTHO05D021299 7.9e-16 89.0 206 30.1
Os01g0764500 Oryza sativa ssp. japonica HOM05D002318 ORTHO05D008744 8.7e-15 85.5 71 60.6
Lsat_1_v5_gn_5_151580 Lactuca sativa HOM05D002318 ORTHO05D008744 4.9e-10 69.7 56 66.1
MD13G1066100 Malus domestica HOM05D002318 ORTHO05D008744 7.9e-08 62.4 78 44.9
arahy.Tifrunner.gnm1.ann1.QV9UMR Arachis hypogaea HOM05D000001 ORTHO05D000003 1.3e-07 61.6 152 30.9


User provided reference genes

Program Settings