Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 4.3e-98 361.3 182 100.0
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 5.6e-61 238.0 176 72.7
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 4.0e-59 231.9 183 67.2
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 9.8e-58 227.3 180 66.7
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 8.3e-57 224.2 179 63.7
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 5.4e-56 221.5 181 62.4
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 1.2e-55 220.3 177 66.7
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 2.0e-55 219.5 182 63.2
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 2.0e-55 219.5 179 63.7
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 5.9e-55 218.0 173 65.9
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 5.0e-54 214.9 178 66.3
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 1.5e-53 213.4 133 78.2
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 2.5e-53 212.6 177 62.1
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 3.3e-53 212.2 132 78.8
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 4.3e-53 211.8 137 77.4
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 1.6e-52 209.9 183 61.2
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 2.1e-52 209.5 175 61.7
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.1e-52 209.5 155 65.8
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 2.1e-52 209.5 155 65.8
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 8.0e-52 207.6 179 60.3
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 1.0e-51 207.2 183 59.0
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.4e-51 206.8 134 76.9
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 1.8e-51 206.5 142 71.1
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 1.8e-51 206.5 138 75.4
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 2.3e-51 206.1 127 77.2
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 4.0e-51 205.3 138 72.5
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 5.2e-51 204.9 180 61.1
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 5.2e-51 204.9 180 61.1
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 5.2e-51 204.9 192 58.3
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 5.2e-51 204.9 153 66.0
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 6.8e-51 204.5 133 75.9
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 5.8e-50 201.4 188 56.4
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 9.8e-50 200.7 184 58.7
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 9.8e-50 200.7 136 70.6
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 8.3e-49 197.6 189 57.1
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.4e-48 196.8 156 62.8
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 3.2e-48 195.7 126 73.0
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 7.0e-48 194.5 185 58.9
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 7.0e-48 194.5 150 65.3
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 1.6e-47 193.4 204 53.4
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 3.5e-47 192.2 144 66.7
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 4.6e-47 191.8 156 64.7
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 6.0e-47 191.4 151 62.3
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 1.0e-46 190.7 170 60.6
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 1.0e-46 190.7 183 54.6
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.3e-46 190.3 130 71.5
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 1.3e-46 190.3 124 71.0
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 1.7e-46 189.9 151 62.9
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 1.7e-46 189.9 107 84.1
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 2.3e-46 189.5 180 55.6
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.9e-46 188.7 142 65.5
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 6.6e-46 188.0 124 72.6
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 8.6e-46 187.6 175 57.7
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 1.1e-45 187.2 150 63.3
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 1.5e-45 186.8 147 61.2
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 1.9e-45 186.4 130 73.1
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 4.3e-45 185.3 147 60.5
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 5.6e-45 184.9 138 65.9
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 9.5e-45 184.1 147 60.5
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 1.2e-44 183.7 124 67.7
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 2.8e-44 182.6 183 55.2
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 3.6e-44 182.2 183 51.9
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 4.7e-44 181.8 172 57.0
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 4.7e-44 181.8 136 68.4
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 4.7e-44 181.8 122 69.7
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 4.7e-44 181.8 138 64.5
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 6.2e-44 181.4 144 63.2
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 1.8e-43 179.9 122 68.9
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 4.0e-43 178.7 177 53.1
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.0e-43 178.7 128 65.6
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.0e-43 178.7 128 65.6
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 5.2e-43 178.3 128 64.8
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 8.9e-43 177.6 156 59.6
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.2e-42 177.2 125 67.2
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 1.2e-42 177.2 123 69.9
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 2.0e-42 176.4 136 64.7
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 2.0e-42 176.4 180 52.2
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 5.8e-42 174.9 118 71.2
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 5.8e-42 174.9 121 68.6
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 7.5e-42 174.5 168 52.4
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 9.8e-42 174.1 125 65.6
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 1.3e-41 173.7 104 78.8
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 2.9e-41 172.6 111 73.0
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 3.7e-41 172.2 121 67.8
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 3.7e-41 172.2 182 50.5
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 8.3e-41 171.0 161 54.7
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.1e-40 170.6 162 56.2
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.1e-40 170.6 125 65.6
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 1.9e-40 169.9 156 57.1
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 2.4e-40 169.5 182 50.5
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 5.4e-40 168.3 125 64.0
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 9.2e-40 167.5 125 64.0
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 9.2e-40 167.5 125 64.0
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 9.2e-40 167.5 125 64.0
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 9.2e-40 167.5 125 64.0
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 9.2e-40 167.5 125 64.0
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 4.6e-39 165.2 183 49.7
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 1.5e-37 160.2 120 62.5
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 1.9e-37 159.8 117 65.8
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 5.8e-34 148.3 99 71.7
BcaC03g17213 Brassica carinata HOM05D006961 ORTHO05D008809 3.6e-28 129.0 149 48.3
C02p51430 Brassica napus HOM05D006961 ORTHO05D008809 3.6e-28 129.0 149 48.3
BolC2t11231H Brassica oleracea HOM05D006961 ORTHO05D008809 3.6e-28 129.0 149 48.3
Gorai.009G326100 Gossypium raimondii HOM05D006961 ORTHO05D008809 3.6e-28 129.0 132 57.6
Actinidia31945 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.3e-25 120.6 141 50.4
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 2.9e-25 119.4 157 41.4
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 9.3e-24 114.4 85 62.4
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 2.7e-23 112.8 133 46.6
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 3.0e-22 109.4 132 44.7
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 2.5e-21 106.3 107 51.4
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 5.8e-18 95.1 118 41.5
SalBow2G3119 Salvia bowleyana HOM05D006961 ORTHO05D008809 7.1e-16 88.2 70 65.7
FAN12G0580 Fragaria x ananassa HOM05D006961 ORTHO05D008809 5.1e-14 82.0 50 68.0
Cre02.g114450 Chlamydomonas reinhardtii HOM05D006961 ORTHO05D008809 1.3e-09 67.4 105 41.0


User provided reference genes

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