Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 3.3e-54 214.9 118 100.0
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 5.8e-51 204.1 118 88.1
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 1.9e-46 189.1 116 84.5
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 3.6e-45 184.9 119 78.2
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 8.1e-45 183.7 121 77.7
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 3.1e-44 181.8 121 77.7
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 5.2e-44 181.0 121 81.0
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 5.2e-44 181.0 121 76.0
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 8.9e-44 180.3 121 76.0
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 1.2e-43 179.9 119 75.6
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 1.5e-43 179.5 121 76.9
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 1.5e-43 179.5 121 75.2
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.0e-43 179.1 121 79.3
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 2.0e-43 179.1 121 79.3
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 2.6e-43 178.7 112 81.2
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 3.4e-43 178.3 121 80.2
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 4.4e-43 177.9 117 76.1
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.4e-43 177.9 121 75.2
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 5.8e-43 177.6 121 77.7
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 5.8e-43 177.6 121 75.2
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 5.8e-43 177.6 117 76.9
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 7.5e-43 177.2 112 80.4
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 1.3e-42 176.4 121 78.5
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 1.3e-42 176.4 117 76.9
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 2.2e-42 175.6 121 81.0
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 2.9e-42 175.3 121 73.6
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 6.4e-42 174.1 118 72.9
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 6.4e-42 174.1 121 72.7
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 8.3e-42 173.7 118 74.6
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 8.3e-42 173.7 121 74.4
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.1e-41 173.3 121 73.6
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 1.4e-41 172.9 121 75.2
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.9e-41 172.6 121 71.1
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 1.9e-41 172.6 119 73.1
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 2.4e-41 172.2 121 73.6
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 4.1e-41 171.4 114 75.4
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 5.4e-41 171.0 121 71.9
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 7.1e-41 170.6 118 75.4
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 7.1e-41 170.6 121 70.2
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 9.2e-41 170.2 121 76.0
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.2e-40 169.9 121 70.2
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.2e-40 169.9 121 71.9
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 2.7e-40 168.7 121 71.1
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 2.7e-40 168.7 121 71.9
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 2.7e-40 168.7 120 73.3
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 6.0e-40 167.5 112 73.2
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 7.8e-40 167.2 112 73.2
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.7e-39 166.0 112 76.8
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 1.7e-39 166.0 121 71.1
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.3e-39 165.6 112 75.9
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 2.3e-39 165.6 121 73.6
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 3.0e-39 165.2 111 77.5
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 3.0e-39 165.2 146 65.8
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 3.9e-39 164.9 121 70.2
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 5.1e-39 164.5 121 68.6
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 5.1e-39 164.5 118 71.2
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 6.6e-39 164.1 121 74.4
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 1.5e-38 162.9 114 72.8
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 3.3e-38 161.8 120 69.2
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 7.3e-38 160.6 112 73.2
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 7.3e-38 160.6 114 71.9
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 1.6e-37 159.5 114 76.3
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 2.1e-37 159.1 112 72.3
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 3.6e-37 158.3 114 69.3
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 4.7e-37 157.9 114 70.2
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 1.4e-36 156.4 112 71.4
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 1.8e-36 156.0 112 71.4
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.8e-36 156.0 112 71.4
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.8e-36 156.0 112 71.4
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 1.8e-36 156.0 112 70.5
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 1.8e-36 156.0 114 69.3
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 2.3e-36 155.6 112 71.4
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 4.0e-36 154.8 121 64.5
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 4.0e-36 154.8 112 70.5
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 5.2e-36 154.5 112 70.5
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 5.2e-36 154.5 112 70.5
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 5.2e-36 154.5 112 70.5
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 5.2e-36 154.5 112 70.5
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 6.8e-36 154.1 101 77.2
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 6.8e-36 154.1 121 73.6
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 3.4e-35 151.8 114 66.7
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 4.4e-35 151.4 111 64.9
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 1.3e-34 149.8 113 67.3
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 2.2e-34 149.1 113 69.0
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 3.8e-34 148.3 101 73.3
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 8.4e-34 147.1 114 63.2
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 8.4e-34 147.1 114 70.2
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 3.2e-33 145.2 104 72.1
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 5.4e-33 144.4 105 72.4
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 5.4e-33 144.4 104 72.1
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 5.4e-33 144.4 100 72.0
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 5.4e-33 144.4 110 73.6
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 9.2e-33 143.7 113 59.3
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.2e-32 143.3 108 69.4
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 1.6e-32 142.9 105 69.5
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 1.6e-32 142.9 104 70.2
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 3.5e-32 141.7 104 68.3
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 4.6e-32 141.4 104 70.2
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 7.8e-32 140.6 105 63.8
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.0e-31 140.2 104 69.2
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 1.0e-31 140.2 105 63.8
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 1.3e-31 139.8 87 77.0
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.7e-31 139.4 89 76.4
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 3.0e-31 138.7 107 65.4
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 3.9e-31 138.3 89 78.7
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 1.1e-30 136.7 104 65.4
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 1.9e-30 136.0 112 63.4
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 1.9e-30 136.0 108 65.7
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 1.9e-30 136.0 103 68.0
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 2.5e-30 135.6 101 68.3
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 2.5e-30 135.6 103 68.0
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 5.6e-30 134.4 111 57.7
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 7.3e-30 134.0 99 65.7
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 2.1e-29 132.5 106 57.5
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 2.8e-29 132.1 105 68.6
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 2.8e-29 132.1 106 58.5
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 1.1e-28 130.2 91 70.3
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 5.2e-28 127.9 103 65.0
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 8.9e-28 127.1 95 70.5
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 2.2e-26 122.5 126 55.6
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 8.4e-26 120.6 104 55.8
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.4e-25 119.8 98 58.2
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 7.1e-25 117.5 109 54.1
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 7.1e-25 117.5 101 63.4
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 9.3e-25 117.1 101 56.4
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.5e-22 109.0 93 58.1
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.8e-21 104.8 75 72.0
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 6.2e-21 104.4 111 45.9
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 9.0e-20 100.5 111 55.9
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 9.9e-19 97.1 70 67.1
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 2.2e-18 95.9 109 48.6
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 1.3e-15 86.7 79 54.4
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.1e-14 83.6 62 72.6
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 2.0e-11 72.8 85 50.6
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.0e-11 72.8 66 56.1
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 2.0e-11 72.8 109 38.5
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.2e-10 69.3 43 67.4
Cre14.g614250 Chlamydomonas reinhardtii HOM05D005560 ORTHO05D006862 1.8e-07 59.7 94 31.9
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 7.4e-06 54.3 95 33.7


User provided reference genes

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