Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 1.7e-97 359.8 240 100.0
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 3.9e-86 322.0 240 92.1
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 5.2e-75 285.0 232 84.9
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 6.6e-62 241.5 276 67.0
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 8.4e-41 171.4 244 61.1
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 1.9e-40 170.2 240 62.9
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 9.6e-37 157.9 251 59.4
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 3.7e-36 156.0 237 60.8
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 4.0e-35 152.5 246 60.6
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.5e-34 150.6 242 60.3
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.5e-34 150.6 251 58.2
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 3.4e-34 149.4 251 58.2
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 1.0e-33 147.9 247 58.7
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 6.5e-33 145.2 247 57.9
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 5.5e-32 142.1 245 58.0
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 5.5e-32 142.1 240 58.8
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 7.9e-31 138.3 247 57.1
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 7.9e-31 138.3 232 59.9
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 5.1e-30 135.6 244 57.0
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 1.5e-29 134.0 244 56.1
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 4.3e-29 132.5 244 56.6
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 1.6e-28 130.6 245 56.3
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 2.2e-25 120.2 215 59.1
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 2.9e-25 119.8 241 55.6
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 2.9e-25 119.8 240 57.9
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 7.2e-24 115.2 262 52.7
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 2.1e-23 113.6 247 54.3
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 7.9e-23 111.7 248 56.5
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.0e-22 109.8 231 58.4
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 1.1e-21 107.8 250 50.8
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 7.4e-21 105.1 237 46.4
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 2.8e-20 103.2 244 50.8
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 4.8e-20 102.4 248 49.2
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 1.8e-19 100.5 253 49.8
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 2.4e-19 100.1 236 53.4
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 5.3e-19 99.0 246 49.6
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 6.9e-19 98.6 243 50.6
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 2.6e-18 96.7 233 53.6
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 2.2e-17 93.6 242 47.9
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 6.5e-17 92.0 243 53.1
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 8.5e-17 91.7 242 48.3
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 1.9e-16 90.5 245 52.7
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 7.2e-16 88.6 248 50.4
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 9.4e-16 88.2 193 60.6
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 9.4e-16 88.2 229 45.9
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 1.2e-15 87.8 232 52.2
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 1.6e-15 87.4 247 45.7
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 2.1e-15 87.0 247 48.6
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 3.6e-15 86.3 244 52.0
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 3.6e-15 86.3 225 53.3
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 6.7e-14 82.0 243 47.7
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 1.1e-13 81.3 249 47.4
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 1.1e-13 81.3 249 47.4
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.5e-13 80.9 236 48.3
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 1.5e-13 80.9 236 48.3
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 2.0e-13 80.5 232 48.3
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 2.0e-13 80.5 243 52.3
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 2.6e-13 80.1 236 39.0
Lalb_Chr20g0120751 Lupinus albus HOM05D007634 ORTHO05D004310 3.3e-13 79.7 235 50.2
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.4e-13 79.3 185 58.9
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 5.7e-13 79.0 237 42.6
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 7.4e-13 78.6 229 52.4
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 7.4e-13 78.6 256 37.9
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 7.4e-13 78.6 245 50.6
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 2.8e-12 76.6 255 46.7
Gorai.006G265400 Gossypium raimondii HOM05D007634 ORTHO05D004310 2.8e-12 76.6 224 47.8
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 4.8e-12 75.9 242 36.4
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 6.3e-12 75.5 79 54.4
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 8.2e-12 75.1 79 53.2
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 1.1e-11 74.7 239 49.8
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 1.4e-11 74.3 245 49.4
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 2.4e-11 73.6 243 49.0
Lalb_Chr07g0181961 Lupinus albus HOM05D007634 ORTHO05D004310 2.4e-11 73.6 226 49.6
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 3.1e-11 73.2 184 59.2
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 9.1e-11 71.6 241 49.4
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.0e-10 70.5 262 47.3
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 7.7e-10 68.6 246 47.6
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 2.2e-09 67.0 237 47.3
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 2.9e-09 66.6 249 45.4
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 5.0e-09 65.9 232 34.5
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 5.0e-09 65.9 250 46.8
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 8.5e-09 65.1 249 45.8
PSO210G0186 Papaver somniferum HOM05D058645 ORTHO05D004310 1.4e-08 64.3 229 50.2
PSO761G0298 Papaver somniferum HOM05D058645 ORTHO05D004310 1.4e-08 64.3 236 50.0
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 3.2e-08 63.2 239 46.9
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 3.2e-08 63.2 244 33.6
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 5.5e-08 62.4 194 52.1
EL10Ac3g05537 Beta vulgaris HOM05D007634 ORTHO05D004310 5.5e-08 62.4 273 41.4
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 5.5e-08 62.4 247 44.1
Gohir.A10G174000 Gossypium hirsutum HOM05D032758 ORTHO05D004310 5.5e-08 62.4 219 46.6
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 5.5e-08 62.4 250 39.6
Gohir.D10G180500 Gossypium hirsutum HOM05D032758 ORTHO05D047072 9.4e-08 61.6 222 47.3
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 9.4e-08 61.6 234 47.9
Solyc05g053360.3 Solanum lycopersicum HOM05D012194 ORTHO05D015569 2.1e-07 60.5 240 43.3
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 2.1e-07 60.5 228 48.7
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 2.7e-07 60.1 242 47.9
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 2.7e-07 60.1 242 47.9
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 2.7e-07 60.1 243 31.3
Gorai.011G202000 Gossypium raimondii HOM05D032758 ORTHO05D047072 3.6e-07 59.7 223 46.6
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 4.7e-07 59.3 223 50.7
Lsat_1_v5_gn_6_116040 Lactuca sativa HOM05D031577 ORTHO05D004310 4.7e-07 59.3 78 43.6
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 4.7e-07 59.3 247 31.6
Sopen05g031870 Solanum pennellii HOM05D012194 ORTHO05D015569 6.1e-07 58.9 235 43.4
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 8.0e-07 58.5 254 46.1
Ca_21412_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 8.0e-07 58.5 239 48.1
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 8.0e-07 58.5 269 46.1
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 1.0e-06 58.2 229 47.6
ATR0693G086 Amborella trichopoda HOM05D007634 ORTHO05D004310 1.8e-06 57.4 235 41.3
ECA246G0838 Erigeron canadensis HOM05D031577 ORTHO05D004310 2.3e-06 57.0 78 43.6
Ah.13g071450 Amaranthus hybridus HOM05D007634 ORTHO05D004310 3.0e-06 56.6 228 46.5
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 3.0e-06 56.6 260 45.8
Rhsim02G0002500 Rhododendron simsii HOM05D032642 ORTHO05D004310 5.2e-06 55.8 182 51.1


User provided reference genes

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