Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G138001 Populus trichocarpa HOM05D008548 ORTHO05D010565 2.6e-74 282.0 142 100.0
Sabra08G0084500 Salix brachista HOM05D008548 ORTHO05D010565 5.2e-38 161.4 126 69.0
Manes.14G090400 Manihot esculenta HOM05D008548 ORTHO05D010565 4.2e-24 115.2 144 48.6
Thecc.02G322600 Theobroma cacao HOM05D008548 ORTHO05D010565 5.5e-24 114.8 142 50.0
Manes.06G079400 Manihot esculenta HOM05D008548 ORTHO05D010565 3.0e-22 109.0 145 51.7
Gohir.A13G088200 Gossypium hirsutum HOM05D008548 ORTHO05D010565 8.8e-22 107.5 143 50.3
Sabra10G0106300 Salix brachista HOM05D008548 ORTHO05D010565 1.5e-21 106.7 92 70.7
Gohir.D13G085600 Gossypium hirsutum HOM05D008548 ORTHO05D010565 3.4e-21 105.5 143 49.0
QL03p073326 Quercus lobata HOM05D008548 ORTHO05D010565 1.7e-20 103.2 141 47.5
Glyma.01G065000 Glycine max HOM05D008548 ORTHO05D010565 4.8e-20 101.7 145 43.4
Gorai.013G097500 Gossypium raimondii HOM05D008548 ORTHO05D010565 8.3e-20 100.9 143 48.3
Rhsim09G0122000 Rhododendron simsii HOM05D008548 ORTHO05D010565 2.4e-19 99.4 148 43.9
Prupe.1G293600 Prunus persica HOM05D008548 ORTHO05D010565 5.9e-18 94.7 145 43.4
Duzib251G0541 Durio zibethinus HOM05D008548 ORTHO05D010565 2.9e-17 92.4 144 45.8
Phvul.003G038200 Phaseolus vulgaris HOM05D008548 ORTHO05D010565 6.5e-17 91.3 146 42.5
CANSAT64G1261 Cannabis sativa HOM05D008548 ORTHO05D010565 7.2e-16 87.8 142 43.7
CiPaw.06G095100 Carya illinoinensis HOM05D008548 ORTHO05D010565 9.5e-16 87.4 141 41.8
Haze_11858 Corylus avellana HOM05D003025 ORTHO05D003305 2.1e-15 86.3 98 48.0
VMungo1215G2679 Vigna mungo HOM05D008548 ORTHO05D010565 6.1e-15 84.7 145 41.4
TWI79G1579 Tripterygium wilfordii HOM05D008548 ORTHO05D010565 8.0e-15 84.3 139 45.3
FvH4_4g29280 Fragaria vesca HOM05D023608 ORTHO05D010565 1.4e-14 83.6 143 43.4
FAN12G2598 Fragaria x ananassa HOM05D023608 ORTHO05D010565 1.4e-14 83.6 143 43.4
Glyma.02G122800 Glycine max HOM05D008548 ORTHO05D010565 1.4e-14 83.6 145 42.1
CiPaw.05G121500 Carya illinoinensis HOM05D008548 ORTHO05D010565 1.8e-14 83.2 147 40.1
Lj2g0005577 Lotus japonicus HOM05D008548 ORTHO05D010565 3.0e-14 82.4 149 40.3
arahy.Tifrunner.gnm1.ann1.R5LUMW Arachis hypogaea HOM05D008548 ORTHO05D010565 4.0e-14 82.0 149 39.6
FAN17G1069 Fragaria x ananassa HOM05D023608 ORTHO05D010565 1.2e-13 80.5 142 42.3
Ciclev10033730m.g Citrus clementina HOM05D008548 ORTHO05D010565 1.5e-13 80.1 141 41.1
MD16G1055300 Malus domestica HOM05D008548 ORTHO05D010565 1.5e-13 80.1 137 40.9
Duzib248G0997 Durio zibethinus HOM05D008548 ORTHO05D010565 3.4e-13 79.0 143 43.4
FAN22G1173 Fragaria x ananassa HOM05D023608 ORTHO05D010565 3.4e-13 79.0 144 42.4
Cpa.g.sc1.170 Carica papaya HOM05D008548 ORTHO05D010565 4.4e-13 78.6 143 38.5
Lalb_Chr10g0099171 Lupinus albus HOM05D008548 ORTHO05D010565 1.7e-12 76.6 146 37.7
MD13G1056400 Malus domestica HOM05D008548 ORTHO05D010565 2.2e-12 76.3 144 42.4
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 2.8e-12 75.9 97 46.4
PGR119G2115 Punica granatum HOM05D008548 ORTHO05D010565 2.8e-12 75.9 142 35.9
Gorai.005G147800 Gossypium raimondii HOM05D008548 ORTHO05D010565 3.7e-12 75.5 144 41.0
Gohir.A03G106700 Gossypium hirsutum HOM05D008548 ORTHO05D010565 1.8e-11 73.2 146 38.4
Rhsim12G0071200 Rhododendron simsii HOM05D008548 ORTHO05D010565 2.4e-11 72.8 157 42.7
DCAR_026688 Daucus carota HOM05D008548 ORTHO05D010565 1.2e-10 70.5 39 79.5
TPR.G38502 Trifolium pratense HOM05D008548 ORTHO05D010565 1.0e-09 67.4 143 37.1
Medtr5g048090 Medicago truncatula HOM05D008548 ORTHO05D010565 1.3e-09 67.0 146 35.6
Nn3g17542 Nelumbo nucifera HOM05D008548 ORTHO05D010565 1.7e-09 66.6 137 37.2
vmacro01297 Vaccinium macrocarpon HOM05D008548 ORTHO05D010565 3.8e-09 65.5 57 57.9
arahy.Tifrunner.gnm1.ann1.BD088N Arachis hypogaea HOM05D008548 ORTHO05D010565 1.9e-08 63.2 144 36.8
arahy.Tifrunner.gnm1.ann1.Y4YZ09 Arachis hypogaea HOM05D008548 ORTHO05D010565 1.2e-07 60.5 144 37.5
PGSC0003DMG400019660 Solanum tuberosum HOM05D008548 ORTHO05D010565 1.2e-07 60.5 46 65.2
Lsat_1_v5_gn_4_16601 Lactuca sativa HOM05D037328 ORTHO05D036346 2.8e-07 59.3 135 31.9
Peaxi162Scf00188g01031 Petunia axillaris HOM05D008548 ORTHO05D010565 4.7e-07 58.5 32 81.2
Sopen05g006580 Solanum pennellii HOM05D001549 ORTHO05D003098 4.7e-07 58.5 95 46.3
FAN07G0570 Fragaria x ananassa HOM05D023608 ORTHO05D010565 1.4e-06 57.0 152 32.2
Lalb_Chr17g0341471 Lupinus albus HOM05D008548 ORTHO05D010565 1.4e-06 57.0 135 35.6
Solyc05g011825.2 Solanum lycopersicum HOM05D008548 ORTHO05D010565 1.4e-06 57.0 132 37.9
SGA_v2.0_scaffold287G47189 Striga asiatica HOM05D003025 ORTHO05D003305 1.4e-06 57.0 132 31.8
Lsat_1_v5_gn_3_104501 Lactuca sativa HOM05D008548 ORTHO05D010565 5.2e-06 55.1 73 46.6


User provided reference genes

Program Settings