Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G134600 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.5e-150 536.2 272 100.0
Sabra10G0103400 Salix brachista HOM05D006853 ORTHO05D008906 2.6e-139 498.8 272 94.1
Potri.008G110700 Populus trichocarpa HOM05D006853 ORTHO05D008906 1.2e-123 446.8 272 86.0
Manes.06G077700 Manihot esculenta HOM05D006853 ORTHO05D008906 3.5e-112 408.7 272 76.1
Haze_23238 Corylus avellana HOM05D006853 ORTHO05D008906 1.4e-103 380.2 272 69.1
COL.COLO4_27747 Corchorus olitorius HOM05D006853 ORTHO05D008906 2.3e-103 379.4 272 68.8
CiPaw.06G096100 Carya illinoinensis HOM05D006853 ORTHO05D008906 1.5e-102 376.7 272 68.8
Atru.chr11.1459 Acer truncatum HOM05D006853 ORTHO05D008906 2.0e-102 376.3 272 71.7
Atru.chr11.1493 Acer truncatum HOM05D006853 ORTHO05D008906 2.0e-102 376.3 272 71.7
Thecc.02G317700 Theobroma cacao HOM05D006853 ORTHO05D008906 3.3e-102 375.6 272 68.8
Gohir.D02G132900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 7.4e-102 374.4 272 68.4
Gohir.A03G107900 Gossypium hirsutum HOM05D006853 ORTHO05D008906 2.2e-101 372.9 272 68.0
QL03p047845 Quercus lobata HOM05D006853 ORTHO05D008906 1.4e-100 370.2 271 69.4
Duzib268G1722 Durio zibethinus HOM05D006853 ORTHO05D008906 2.4e-100 369.4 275 68.0
CSS0047872 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 1.5e-99 366.7 273 65.9
Cfa009867 Carpinus fangiana HOM05D006853 ORTHO05D008906 1.5e-99 366.7 259 70.7
Ciclev10032464m.g Citrus clementina HOM05D006853 ORTHO05D008906 4.5e-99 365.2 272 67.6
CSS0003455 Camellia sinensis var. sinensis HOM05D006853 ORTHO05D008906 4.2e-97 358.6 273 65.6
Cpa.g.sc53.10 Carica papaya HOM05D006853 ORTHO05D008906 1.0e-95 354.0 272 65.1
TWI31G0390 Tripterygium wilfordii HOM05D006853 ORTHO05D008906 5.7e-94 348.2 253 68.8
Lj6P771T55 Lonicera japonica HOM05D006853 ORTHO05D008906 2.8e-93 345.9 272 66.2
Nitab4.5_0000027g0460 Nicotiana tabacum HOM05D006853 ORTHO05D008906 1.8e-92 343.2 272 63.6
Nitab4.5_0010998g0020 Nicotiana tabacum HOM05D006853 ORTHO05D008906 5.3e-92 341.7 272 63.6
Rhsim09G0117300 Rhododendron simsii HOM05D006853 ORTHO05D008906 5.3e-92 341.7 272 63.6
Sed0015072 Sechium edule HOM05D006853 ORTHO05D008906 4.5e-91 338.6 274 63.1
Actinidia31918 Actinidia chinensis HOM05D006853 ORTHO05D006634 5.9e-91 338.2 256 66.8
Hma1.2p1_0762F.1_g214380 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 2.2e-90 336.3 273 63.4
Eucgr.B03092 Eucalyptus grandis HOM05D006853 ORTHO05D008906 5.5e-89 331.6 273 64.1
CAN.G184.17 Capsicum annuum HOM05D006853 ORTHO05D008906 9.4e-89 330.9 272 62.1
CANSAT64G2393 Cannabis sativa HOM05D006853 ORTHO05D008906 2.1e-88 329.7 272 62.9
MSTRG.7709 Avicennia marina HOM05D006853 ORTHO05D008906 8.0e-88 327.8 272 61.0
Peaxi162Scf00188g00063 Petunia axillaris HOM05D006853 ORTHO05D008906 1.0e-87 327.4 272 62.1
MELO3C005171.2 Cucumis melo HOM05D006853 ORTHO05D008906 1.4e-87 327.0 272 62.9
ClCG01G007410 Citrullus lanatus HOM05D006853 ORTHO05D008906 1.8e-87 326.6 272 61.0
Sopen05g006060 Solanum pennellii HOM05D006853 ORTHO05D008906 3.0e-87 325.9 272 61.0
Oeu024136.2 Olea europaea HOM05D006853 ORTHO05D008906 4.0e-87 325.5 272 61.8
Solyc05g010290.3 Solanum lycopersicum HOM05D006853 ORTHO05D008906 8.8e-87 324.3 272 60.7
PGSC0003DMG400025119 Solanum tuberosum HOM05D006853 ORTHO05D008906 1.1e-86 323.9 272 61.4
PGR102G0342 Punica granatum HOM05D006853 ORTHO05D008906 3.3e-86 322.4 273 61.2
SalBow8G0220 Salvia bowleyana HOM05D006853 ORTHO05D008906 3.3e-86 322.4 272 59.9
SalBow8G1387 Salvia bowleyana HOM05D006853 ORTHO05D008906 2.8e-85 319.3 272 59.6
TAR624G1108 Trochodendron aralioides HOM05D006853 ORTHO05D008906 3.7e-85 318.9 273 61.9
AUR62007823 Chenopodium quinoa HOM05D006853 ORTHO05D008906 3.1e-84 315.8 272 58.1
CsaV3_5G018880 Cucumis sativus L. HOM05D006853 ORTHO05D008906 5.3e-84 315.1 272 61.0
Oeu054577.1 Olea europaea HOM05D006853 ORTHO05D008906 5.3e-84 315.1 272 59.6
Dinv16569 Davidia involucrata HOM05D000044 ORTHO05D006634 5.9e-83 311.6 215 71.6
Aa31LG2G6790 Aethionema arabicum HOM05D006853 ORTHO05D008906 1.7e-82 310.1 274 59.5
AT3G25545 Arabidopsis thaliana HOM05D006853 ORTHO05D008906 1.7e-82 310.1 275 58.5
Carub.0005s0328 Capsella rubella HOM05D006853 ORTHO05D008906 2.2e-82 309.7 275 58.5
Oeu054573.1 Olea europaea HOM05D006853 ORTHO05D008906 2.2e-82 309.7 272 59.2
Oeu054575.1 Olea europaea HOM05D006853 ORTHO05D008906 2.2e-82 309.7 272 59.2
BcaB07g30639 Brassica carinata HOM05D006853 ORTHO05D008906 6.5e-82 308.1 275 58.2
Hund25134 Selenicereus undatus HOM05D006853 ORTHO05D008906 8.5e-82 307.8 272 59.6
Thhalv10004778m.g Eutrema salsugineum HOM05D006853 ORTHO05D008906 3.2e-81 305.8 275 57.5
Sc11g0002760 Simmondsia chinensis HOM05D006853 ORTHO05D008906 4.2e-81 305.4 272 59.6
AL5G14010 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 7.2e-81 304.7 275 56.7
Sp2g14810 Schrenkiella parvula HOM05D006853 ORTHO05D008906 1.2e-80 303.9 275 57.5
BcaB07g30269 Brassica carinata HOM05D006853 ORTHO05D008906 2.1e-80 303.1 273 58.2
Cc11_g11200 Coffea canephora HOM05D006853 ORTHO05D008906 1.0e-79 300.8 272 58.1
Migut.L01132 Erythranthe guttata HOM05D006853 ORTHO05D006634 1.0e-79 300.8 250 61.6
Ah.02g127470 Amaranthus hybridus HOM05D001046 ORTHO05D002934 2.3e-79 299.7 262 58.8
BcaC03g17267 Brassica carinata HOM05D006853 ORTHO05D008906 4.0e-79 298.9 277 57.4
BcaC03g17268 Brassica carinata HOM05D006853 ORTHO05D008906 4.0e-79 298.9 277 57.4
THA.LOC104801842 Tarenaya hassleriana HOM05D006853 ORTHO05D008906 1.2e-78 297.4 274 56.6
HanXRQChr08g0214781 Helianthus annuus HOM05D006853 ORTHO05D008906 4.4e-78 295.4 272 56.6
C02p52120 Brassica napus HOM05D006853 ORTHO05D008906 1.3e-77 293.9 279 55.9
BolC2t11296H Brassica oleracea HOM05D006853 ORTHO05D008906 1.3e-77 293.9 279 55.9
PSO541G5551 Papaver somniferum HOM05D006853 ORTHO05D008906 1.3e-77 293.9 274 58.4
CARHR146460 Cardamine hirsuta HOM05D006853 ORTHO05D008906 2.2e-77 293.1 275 55.6
ECA233G2927 Erigeron canadensis HOM05D006853 ORTHO05D006634 6.3e-77 291.6 263 58.6
PSO675G5986 Papaver somniferum HOM05D006853 ORTHO05D008906 1.8e-76 290.0 274 58.4
MD16G1052100 Malus domestica HOM05D006853 ORTHO05D008906 7.0e-76 288.1 282 57.8
Lsat_1_v5_gn_8_37640 Lactuca sativa HOM05D006853 ORTHO05D008906 1.2e-75 287.3 272 55.9
Prupe.1G299000 Prunus persica HOM05D006853 ORTHO05D006634 5.0e-74 282.0 250 60.8
MD13G1053100 Malus domestica HOM05D006853 ORTHO05D008906 1.5e-73 280.4 282 56.7
Actinidia30174 Actinidia chinensis HOM05D006853 ORTHO05D008906 6.1e-72 275.0 200 68.0
FAN12G0570 Fragaria x ananassa HOM05D006853 ORTHO05D008906 8.0e-72 274.6 278 55.4
FvH4_4g28700 Fragaria vesca HOM05D006853 ORTHO05D008906 1.0e-71 274.2 286 53.8
RcHm_v2.0_Chr4g0436821 Rosa chinensis HOM05D006853 ORTHO05D008906 1.4e-71 273.9 275 56.0
FAN07G1226 Fragaria x ananassa HOM05D006853 ORTHO05D006634 3.7e-69 265.8 275 54.5
HanXRQChr15g0469081 Helianthus annuus HOM05D006853 ORTHO05D008906 6.3e-69 265.0 221 61.1
A02p33840 Brassica napus HOM05D006853 ORTHO05D008906 7.0e-68 261.5 278 52.5
Nn7g37287 Nelumbo nucifera HOM05D006853 ORTHO05D008906 7.0e-68 261.5 274 54.7
BraA02t08402Z Brassica rapa HOM05D006853 ORTHO05D008906 1.7e-66 256.9 278 52.2
Aqoxy5G01341 Aquilegia oxysepala HOM05D006853 ORTHO05D008906 2.8e-64 249.6 240 58.8
SGA_v2.0_scaffold16G07849 Striga asiatica HOM05D006853 ORTHO05D008906 2.6e-62 243.0 274 50.0
unitig_8.g3212 Utricularia gibba HOM05D006853 ORTHO05D008906 9.8e-62 241.1 272 50.4
SHI15728 Sapria himalayana HOM05D006853 ORTHO05D008906 2.9e-61 239.6 273 50.2
Ca_05156_v3 Cicer arietinum L. HOM05D006853 ORTHO05D008906 1.1e-57 227.6 271 48.7
VMungo1215G2951 Vigna mungo HOM05D006853 ORTHO05D008906 2.6e-54 216.5 270 45.2
ATR0721G025 Amborella trichopoda HOM05D006853 ORTHO05D008906 3.7e-53 212.6 275 45.1
HPP92_020023 Vanilla planifolia HOM05D006853 ORTHO05D008906 8.3e-53 211.5 274 47.8
Medtr5g049260 Medicago truncatula HOM05D006853 ORTHO05D008906 9.2e-52 208.0 272 45.6
Medtr5g049270 Medicago truncatula HOM05D006853 ORTHO05D008906 9.2e-52 208.0 272 45.6
Lj2g0007836 Lotus japonicus HOM05D000044 ORTHO05D006634 3.5e-51 206.1 263 45.2
Lalb_Chr17g0341651 Lupinus albus HOM05D006853 ORTHO05D008906 3.5e-51 206.1 272 46.0
Phvul.002G082000 Phaseolus vulgaris HOM05D006853 ORTHO05D008906 5.0e-50 202.2 243 46.9
Hma1.2p1_0125F.1_g058490 Hydrangea macrophylla HOM05D006853 ORTHO05D008906 8.6e-50 201.4 162 64.2
Glyma.01G070150 Glycine max HOM05D006853 ORTHO05D008906 3.3e-49 199.5 251 48.2
SEGI_13208 Sequoiadendron giganteum HOM05D006853 ORTHO05D008906 4.3e-49 199.1 273 45.1
Glyma.02G127200 Glycine max HOM05D006853 ORTHO05D008906 9.5e-49 198.0 251 48.6
GSVIVG01010168001 Vitis vinifera HOM05D000044 ORTHO05D006634 1.1e-47 194.5 245 46.9
arahy.Tifrunner.gnm1.ann1.N8UYM2 Arachis hypogaea HOM05D006853 ORTHO05D008906 1.7e-45 187.2 273 42.9
arahy.Tifrunner.gnm1.ann1.QR8D6Y Arachis hypogaea HOM05D006853 ORTHO05D008906 1.6e-43 180.6 245 44.5
C09p31840 Brassica napus HOM05D006853 ORTHO05D008906 2.1e-43 180.3 201 48.8
BcaC04g21430 Brassica carinata HOM05D006853 ORTHO05D008906 3.5e-43 179.5 201 48.8
Pp3c1_39830 Physcomitrium patens HOM05D006853 ORTHO05D008906 6.6e-34 148.7 239 39.7
SMO164G0046 Selaginella moellendorffii HOM05D006853 ORTHO05D008906 1.4e-28 131.0 266 37.2
AL5G13960 Arabidopsis lyrata HOM05D006853 ORTHO05D008906 4.2e-28 129.4 88 71.6
AagrBONN_evm.TU.Sc2ySwM_368.2648 Anthoceros agrestis HOM05D006853 ORTHO05D008906 5.4e-28 129.0 244 36.1
Os01g0219000 Oryza sativa ssp. japonica HOM05D006853 ORTHO05D008906 5.1e-26 122.5 222 40.5
CDE03G0412 Ceratophyllum demersum HOM05D001926 ORTHO05D002121 1.1e-25 121.3 164 40.2
Zm00001eb119820 Zea mays HOM05D006853 ORTHO05D008906 2.8e-24 116.7 221 36.7
Mapoly0008s0082 Marchantia polymorpha HOM05D006853 ORTHO05D008906 1.8e-23 114.0 249 34.1
HanXRQChr12g0364531 Helianthus annuus HOM05D006853 ORTHO05D008906 2.7e-19 100.1 111 48.6
Psat2g098640 Pisum sativum HOM05D006853 ORTHO05D008906 7.9e-19 98.6 123 44.7
ATR0737G064 Amborella trichopoda HOM05D006853 ORTHO05D008906 1.1e-17 94.7 102 49.0
Psat1g127240 Pisum sativum HOM05D002500 ORTHO05D002587 5.6e-17 92.4 99 50.5
PSO478G3347 Papaver somniferum HOM05D006853 ORTHO05D008906 2.4e-12 77.0 54 66.7
Cre01.g037650 Chlamydomonas reinhardtii HOM05D006853 ORTHO05D008906 9.3e-12 75.1 219 31.5
GSVIVG01017445001 Vitis vinifera HOM05D000518 ORTHO05D001974 2.5e-09 67.0 62 46.8
BraA09t38070Z Brassica rapa HOM05D006853 ORTHO05D008906 1.8e-07 60.8 41 70.7


User provided reference genes

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