Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G129466 Populus trichocarpa HOM05D002406 ORTHO05D007964 7.3e-92 340.5 167 100.0
Sabra10G0098600 Salix brachista HOM05D002406 ORTHO05D007964 1.2e-73 280.0 150 92.7
Potri.008G116800 Populus trichocarpa HOM05D002406 ORTHO05D007964 6.4e-72 274.2 151 90.7
Sabra08G0088500 Salix brachista HOM05D002406 ORTHO05D007964 7.8e-70 267.3 151 88.7
Manes.06G072000 Manihot esculenta HOM05D002406 ORTHO05D007964 1.5e-57 226.5 149 78.5
QL01p045302 Quercus lobata HOM05D002406 ORTHO05D007964 3.5e-54 215.3 151 72.8
Manes.14G097700 Manihot esculenta HOM05D002406 ORTHO05D007964 7.9e-54 214.2 149 73.2
MD13G1046400 Malus domestica HOM05D002406 ORTHO05D007964 1.0e-53 213.8 148 75.0
Prupe.1G305500 Prunus persica HOM05D002406 ORTHO05D007964 1.8e-53 213.0 153 72.5
Eucgr.G02347 Eucalyptus grandis HOM05D002406 ORTHO05D007964 6.7e-53 211.1 158 69.0
Dinv21133 Davidia involucrata HOM05D002406 ORTHO05D007964 8.7e-53 210.7 154 70.8
Thecc.02G360900 Theobroma cacao HOM05D002406 ORTHO05D007964 8.7e-53 210.7 148 75.0
FvH4_4g28080 Fragaria vesca HOM05D002406 ORTHO05D007964 1.9e-52 209.5 151 71.5
Lj3A1020T56 Lonicera japonica HOM05D002406 ORTHO05D007964 1.9e-52 209.5 147 70.7
TWI31G1069 Tripterygium wilfordii HOM05D002406 ORTHO05D007964 1.9e-52 209.5 138 76.8
MELO3C002949.2 Cucumis melo HOM05D002406 ORTHO05D007964 5.6e-52 208.0 150 71.3
FAN07G2527 Fragaria x ananassa HOM05D002406 ORTHO05D007964 5.6e-52 208.0 151 71.5
FAN12G2143 Fragaria x ananassa HOM05D002406 ORTHO05D007964 5.6e-52 208.0 151 70.9
FAN22G0390 Fragaria x ananassa HOM05D002406 ORTHO05D007964 5.6e-52 208.0 151 71.5
Sed0011685 Sechium edule HOM05D002406 ORTHO05D007964 9.6e-52 207.2 152 70.4
CsaV3_5G025330 Cucumis sativus L. HOM05D002406 ORTHO05D007964 2.1e-51 206.1 150 70.0
vmacro10530 Vaccinium macrocarpon HOM05D002406 ORTHO05D007964 2.1e-51 206.1 146 72.6
Duzib251G0875 Durio zibethinus HOM05D002406 ORTHO05D007964 2.8e-51 205.7 141 75.2
Glyma.02G100000 Glycine max HOM05D002406 ORTHO05D007964 3.7e-51 205.3 155 65.8
Hma1.2p1_0862F.1_g229900 Hydrangea macrophylla HOM05D002406 ORTHO05D007964 3.7e-51 205.3 151 70.2
Lalb_Chr04g0254921 Lupinus albus HOM05D002406 ORTHO05D007964 3.7e-51 205.3 155 67.7
FAN17G0215 Fragaria x ananassa HOM05D002406 ORTHO05D007964 6.2e-51 204.5 151 70.2
RcHm_v2.0_Chr4g0435821 Rosa chinensis HOM05D002406 ORTHO05D007964 6.2e-51 204.5 148 73.6
HanXRQChr12g0364801 Helianthus annuus HOM05D002406 ORTHO05D007964 8.2e-51 204.1 146 71.9
Carub.0002s1542 Capsella rubella HOM05D002406 ORTHO05D007964 1.1e-50 203.8 137 73.0
Glyma.01G087900 Glycine max HOM05D002406 ORTHO05D007964 1.1e-50 203.8 150 66.7
CARHR061670 Cardamine hirsuta HOM05D002406 ORTHO05D007964 1.4e-50 203.4 136 73.5
Haze_17442 Corylus avellana HOM05D002406 ORTHO05D007964 1.4e-50 203.4 153 70.6
Lsat_1_v5_gn_8_38401 Lactuca sativa HOM05D002406 ORTHO05D007964 1.8e-50 203.0 167 65.9
Thhalv10018353m.g Eutrema salsugineum HOM05D002406 ORTHO05D007964 2.4e-50 202.6 137 74.5
CSS0033832 Camellia sinensis var. sinensis HOM05D002406 ORTHO05D007964 3.1e-50 202.2 153 69.3
CSS0035809 Camellia sinensis var. sinensis HOM05D002406 ORTHO05D007964 3.1e-50 202.2 153 69.3
Migut.K01266 Erythranthe guttata HOM05D002406 ORTHO05D007964 4.0e-50 201.8 153 69.3
Rhsim09G0111900 Rhododendron simsii HOM05D002406 ORTHO05D007964 4.0e-50 201.8 146 70.5
BraA07t31114Z Brassica rapa HOM05D002406 ORTHO05D007964 6.9e-50 201.1 137 74.5
BcaC08g46333 Brassica carinata HOM05D002406 ORTHO05D007964 9.0e-50 200.7 136 74.3
C06p41060 Brassica napus HOM05D002406 ORTHO05D007964 9.0e-50 200.7 136 74.3
Gohir.D12G170600 Gossypium hirsutum HOM05D002406 ORTHO05D007964 1.2e-49 200.3 138 75.4
A07p35210 Brassica napus HOM05D002406 ORTHO05D007964 1.5e-49 199.9 137 73.7
BolC6t39323H Brassica oleracea HOM05D002406 ORTHO05D007964 2.0e-49 199.5 136 72.8
Sp5g23940 Schrenkiella parvula HOM05D002406 ORTHO05D007964 2.6e-49 199.1 136 73.5
COL.COLO4_07869 Corchorus olitorius HOM05D002406 ORTHO05D007964 5.8e-49 198.0 148 70.3
Oeu022120.1 Olea europaea HOM05D002406 ORTHO05D007964 5.8e-49 198.0 152 69.1
SGA_v2.0_scaffold14G06823 Striga asiatica HOM05D002406 ORTHO05D007964 5.8e-49 198.0 140 70.0
AT1G68830 Arabidopsis thaliana HOM05D002406 ORTHO05D007964 7.6e-49 197.6 137 73.0
PGR119G0491 Punica granatum HOM05D002406 ORTHO05D007964 7.6e-49 197.6 140 74.3
Aa31LG8G10060 Aethionema arabicum HOM05D002406 ORTHO05D007964 1.0e-48 197.2 137 71.5
Phvul.003G027300 Phaseolus vulgaris HOM05D002406 ORTHO05D007964 1.7e-48 196.4 151 65.6
Psat2g073080 Pisum sativum HOM05D002406 ORTHO05D007964 2.2e-48 196.1 151 66.9
TAR371G0458 Trochodendron aralioides HOM05D002406 ORTHO05D007964 2.2e-48 196.1 141 68.8
EL10Ac6g14494 Beta vulgaris HOM05D002406 ORTHO05D007964 2.9e-48 195.7 133 72.2
BcaB03g15855 Brassica carinata HOM05D002406 ORTHO05D007964 2.9e-48 195.7 136 72.8
Ca_05088_v3 Cicer arietinum L. HOM05D002406 ORTHO05D007964 2.9e-48 195.7 148 65.5
Actinidia14853 Actinidia chinensis HOM05D002406 ORTHO05D007964 3.8e-48 195.3 153 68.6
Gorai.008G183200 Gossypium raimondii HOM05D002406 ORTHO05D007964 4.9e-48 194.9 138 73.2
Hund25103 Selenicereus undatus HOM05D002406 ORTHO05D007964 4.9e-48 194.9 138 69.6
Ciclev10031094m.g Citrus clementina HOM05D002406 ORTHO05D007964 6.5e-48 194.5 151 68.9
Lj2g0019756 Lotus japonicus HOM05D002406 ORTHO05D007964 6.5e-48 194.5 146 67.8
Ah.03g137950 Amaranthus hybridus HOM05D002406 ORTHO05D007964 8.4e-48 194.1 135 70.4
THA.LOC104808195 Tarenaya hassleriana HOM05D002406 ORTHO05D007964 8.4e-48 194.1 138 71.0
CANSAT64G2221 Cannabis sativa HOM05D002406 ORTHO05D007964 1.4e-47 193.4 137 73.0
AUR62002921 Chenopodium quinoa HOM05D002406 ORTHO05D007964 1.4e-47 193.4 138 70.3
AL2G27800 Arabidopsis lyrata HOM05D002406 ORTHO05D007964 1.9e-47 193.0 137 70.8
Gohir.A12G170300 Gossypium hirsutum HOM05D002406 ORTHO05D007964 1.9e-47 193.0 138 73.9
TPR.G22415 Trifolium pratense HOM05D000451 ORTHO05D007964 2.5e-47 192.6 146 67.8
AUR62035282 Chenopodium quinoa HOM05D002406 ORTHO05D007964 3.2e-47 192.2 138 69.6
Peaxi162Scf00004g00138 Petunia axillaris HOM05D002406 ORTHO05D007964 3.2e-47 192.2 152 65.8
VMungo1215G3309 Vigna mungo HOM05D002406 ORTHO05D007964 3.2e-47 192.2 140 67.1
ECA233G4417 Erigeron canadensis HOM05D002406 ORTHO05D007964 1.2e-46 190.3 162 65.4
Nn3g17743 Nelumbo nucifera HOM05D002406 ORTHO05D007964 7.9e-46 187.6 137 68.6
Nitab4.5_0000597g0020 Nicotiana tabacum HOM05D002406 ORTHO05D007964 7.9e-46 187.6 135 70.4
Nitab4.5_0009248g0010 Nicotiana tabacum HOM05D002406 ORTHO05D007964 7.9e-46 187.6 135 70.4
TAR629G2259 Trochodendron aralioides HOM05D002406 ORTHO05D007964 7.9e-46 187.6 138 68.8
Medtr5g053450 Medicago truncatula HOM05D002406 ORTHO05D007964 1.3e-45 186.8 145 63.4
Atru.chr11.1356 Acer truncatum HOM05D002406 ORTHO05D007964 1.8e-45 186.4 138 69.6
arahy.Tifrunner.gnm1.ann1.HY6M5B Arachis hypogaea HOM05D002406 ORTHO05D007964 6.7e-45 184.5 151 64.2
arahy.Tifrunner.gnm1.ann1.Z89BXU Arachis hypogaea HOM05D002406 ORTHO05D007964 1.1e-44 183.7 151 64.9
CAN.G430.6 Capsicum annuum HOM05D002406 ORTHO05D007964 1.5e-44 183.3 135 68.1
PSO063G1488 Papaver somniferum HOM05D002406 ORTHO05D007964 1.9e-44 183.0 137 69.3
PSO782G1356 Papaver somniferum HOM05D002406 ORTHO05D007964 1.9e-44 183.0 139 68.3
unitig_52.g17148 Utricularia gibba HOM05D002406 ORTHO05D007964 4.3e-44 181.8 165 61.2
Aqoxy3G03911 Aquilegia oxysepala HOM05D002406 ORTHO05D007964 3.7e-43 178.7 145 65.5
Solyc12g021280.2 Solanum lycopersicum HOM05D002406 ORTHO05D007964 1.1e-42 177.2 136 67.6
Sopen12g011270 Solanum pennellii HOM05D002406 ORTHO05D007964 1.1e-42 177.2 136 67.6
Sc04g0006710 Simmondsia chinensis HOM05D002406 ORTHO05D007964 1.8e-42 176.4 135 65.2
CDE09G1163 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 3.1e-42 175.6 151 62.3
Cpa.g.sc1.223 Carica papaya HOM05D002406 ORTHO05D007964 4.1e-42 175.3 135 71.9
MBI13_g34060_MAGBIO Magnolia biondii HOM05D002406 ORTHO05D007964 5.9e-41 171.4 135 64.4
ATR0681G159 Amborella trichopoda HOM05D002406 ORTHO05D007964 1.0e-40 170.6 97 83.5
CDE02G2223 Ceratophyllum demersum HOM05D002406 ORTHO05D007964 1.0e-40 170.6 151 60.9
Nn4g23734 Nelumbo nucifera HOM05D002406 ORTHO05D007964 5.1e-37 158.3 153 58.2
Zm00001eb294720 Zea mays HOM05D002406 ORTHO05D007964 7.4e-36 154.5 109 68.8
Os05g0549100 Oryza sativa ssp. japonica HOM05D002406 ORTHO05D007964 2.2e-35 152.9 90 78.9
CiPaw.15G003700 Carya illinoinensis HOM05D002406 ORTHO05D007964 5.3e-34 148.3 81 86.4
GSVIVG01011952001 Vitis vinifera HOM05D002406 ORTHO05D007964 5.3e-34 148.3 81 87.7
SMO364G0095 Selaginella moellendorffii HOM05D002406 ORTHO05D007964 1.3e-32 143.7 100 66.0
Cc11_g10600 Coffea canephora HOM05D002406 ORTHO05D007964 5.0e-32 141.7 81 81.5
Pp3c4_25980 Physcomitrium patens HOM05D002406 ORTHO05D007964 5.0e-32 141.7 108 63.0
PGSC0003DMG400006613 Solanum tuberosum HOM05D002406 ORTHO05D007964 1.4e-31 140.2 81 81.5
Pp3c26_5140 Physcomitrium patens HOM05D002406 ORTHO05D007964 2.5e-31 139.4 117 60.7
Mapoly0009s0197 Marchantia polymorpha HOM05D002406 ORTHO05D007964 9.4e-31 137.5 107 61.7
HPP92_009835 Vanilla planifolia HOM05D002406 ORTHO05D007964 2.7e-30 136.0 81 77.8
Oeu042029.1 Olea europaea HOM05D002406 ORTHO05D007964 4.7e-30 135.2 140 57.1
DCAR_026716 Daucus carota HOM05D002406 ORTHO05D007964 2.2e-27 126.3 147 49.7
AagrBONN_evm.TU.Sc2ySwM_117.16 Anthoceros agrestis HOM05D002406 ORTHO05D007964 6.3e-27 124.8 98 64.3
Dinv29536 Davidia involucrata HOM05D002406 ORTHO05D007964 4.1e-26 122.1 81 74.1
CBR_g8256 Chara braunii HOM05D002406 ORTHO05D007964 3.4e-25 119.0 117 50.4
TWI79G0958 Tripterygium wilfordii HOM05D002406 ORTHO05D007964 4.5e-25 118.6 82 75.6
MD03G1264300 Malus domestica HOM05D002406 ORTHO05D247129 1.4e-13 80.5 78 53.8
MCO11G380 Micromonas commoda HOM05D002406 ORTHO05D007964 1.7e-11 73.6 114 43.0
PRCOL_00001571 Prasinoderma coloniale HOM05D002406 ORTHO05D007964 1.7e-11 73.6 96 42.7
Cre02.g120250 Chlamydomonas reinhardtii HOM05D002406 ORTHO05D007964 1.8e-10 70.1 114 38.6


User provided reference genes

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