Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G127900 Populus trichocarpa HOM05D007842 ORTHO05D009661 2.3e-81 305.4 146 100.0
Sabra10G0097200 Salix brachista HOM05D007842 ORTHO05D009661 3.5e-58 228.4 135 83.0
QL01p044511 Quercus lobata HOM05D007842 ORTHO05D009661 6.1e-26 121.3 125 54.4
Thecc.02G358800 Theobroma cacao HOM05D007842 ORTHO05D009661 2.6e-24 115.9 128 46.9
Cfa007650 Carpinus fangiana HOM05D007842 ORTHO05D009661 2.2e-23 112.8 132 50.8
Manes.06G070800 Manihot esculenta HOM05D007842 ORTHO05D009661 1.4e-22 110.2 129 46.5
CiPaw.04G057000 Carya illinoinensis HOM05D007842 ORTHO05D009661 4.1e-22 108.6 108 53.7
Manes.14G099200 Manihot esculenta HOM05D007842 ORTHO05D009661 2.0e-21 106.3 122 50.8
Potri.009G097500 Populus trichocarpa HOM05D007842 ORTHO05D009661 1.7e-20 103.2 126 45.2
Dinv21114 Davidia involucrata HOM05D007842 ORTHO05D009661 2.2e-20 102.8 124 46.8
TWI31G1443 Tripterygium wilfordii HOM05D007842 ORTHO05D009661 1.9e-19 99.8 130 44.6
COL.COLO4_07888 Corchorus olitorius HOM05D007842 ORTHO05D009661 9.4e-19 97.4 110 51.8
Rhsim09G0110600 Rhododendron simsii HOM05D007842 ORTHO05D009661 2.7e-18 95.9 116 46.6
CiPaw.03G089900 Carya illinoinensis HOM05D007842 ORTHO05D009661 8.0e-18 94.4 112 46.4
Hma1.2p1_0030F.1_g018270 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 2.3e-17 92.8 117 47.0
Actinidia14866 Actinidia chinensis HOM05D007842 ORTHO05D009661 8.8e-17 90.9 123 43.1
Atru.chr11.1326 Acer truncatum HOM05D007842 ORTHO05D009661 5.7e-16 88.2 75 58.7
Lj5g0000394 Lotus japonicus HOM05D007842 ORTHO05D009661 9.7e-16 87.4 125 36.8
Actinidia16632 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.3e-15 87.0 120 43.3
Glyma.20G113700 Glycine max HOM05D007842 ORTHO05D009661 2.2e-15 86.3 123 38.2
Manes.14G099300 Manihot esculenta HOM05D007842 ORTHO05D009661 2.8e-15 85.9 125 40.8
TAR629G0634 Trochodendron aralioides HOM05D000414 ORTHO05D000276 4.8e-15 85.1 140 42.1
Migut.L01087 Erythranthe guttata HOM05D007842 ORTHO05D009661 6.3e-15 84.7 133 40.6
Lsat_1_v5_gn_4_18820 Lactuca sativa HOM05D007842 ORTHO05D009661 1.4e-14 83.6 115 44.3
Glyma.10G276000 Glycine max HOM05D007842 ORTHO05D009661 4.1e-14 82.0 122 37.7
Medtr1g111300 Medicago truncatula HOM05D007842 ORTHO05D009661 1.2e-13 80.5 123 37.4
TPR.G26298 Trifolium pratense HOM05D007842 ORTHO05D009661 1.2e-13 80.5 122 37.7
Actinidia04615 Actinidia chinensis HOM05D007842 ORTHO05D009661 1.6e-13 80.1 135 42.2
Lsat_1_v5_gn_4_18840 Lactuca sativa HOM05D007842 ORTHO05D009661 2.0e-13 79.7 115 40.9
SalBow8G3786 Salvia bowleyana HOM05D007842 ORTHO05D009661 2.6e-13 79.3 111 42.3
SalBow8G5078 Salvia bowleyana HOM05D007842 ORTHO05D009661 2.6e-13 79.3 111 42.3
TAR371G0248 Trochodendron aralioides HOM05D007842 ORTHO05D009661 3.5e-13 79.0 119 48.7
MSTRG.13511 Avicennia marina HOM05D007842 ORTHO05D009661 7.7e-13 77.8 125 41.6
Hma1.2p1_0030F.1_g018290 Hydrangea macrophylla HOM05D007842 ORTHO05D009661 7.7e-13 77.8 114 41.2
VMungo0720G1629 Vigna mungo HOM05D007842 ORTHO05D009661 7.7e-13 77.8 123 35.0
Gohir.A12G169100 Gossypium hirsutum HOM05D007842 ORTHO05D009661 1.7e-12 76.6 115 44.3
Actinidia38383 Actinidia chinensis HOM05D007842 ORTHO05D009661 2.2e-12 76.3 130 40.8
Haze_14444 Corylus avellana HOM05D007842 ORTHO05D009661 2.9e-12 75.9 86 46.5
Phvul.007G025600 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 3.8e-12 75.5 123 35.8
ECA246G3435 Erigeron canadensis HOM05D007842 ORTHO05D009661 6.5e-12 74.7 110 43.6
SGA_v2.0_scaffold124G33571 Striga asiatica HOM05D007842 ORTHO05D009661 3.2e-11 72.4 119 38.7
DCAR_007231 Daucus carota HOM05D007842 ORTHO05D009661 5.5e-11 71.6 111 41.4
Gohir.D12G172400 Gossypium hirsutum HOM05D007842 ORTHO05D009661 5.5e-11 71.6 110 42.7
Oeu004600.1 Olea europaea HOM05D007842 ORTHO05D009661 5.5e-11 71.6 107 43.9
Lj2g0000320 Lotus japonicus HOM05D007842 ORTHO05D009661 1.2e-10 70.5 109 36.7
Lsat_1_v5_gn_4_18760 Lactuca sativa HOM05D007842 ORTHO05D009661 2.7e-10 69.3 107 42.1
Gorai.008G184900 Gossypium raimondii HOM05D007842 ORTHO05D009661 3.6e-10 68.9 115 41.7
Oeu041893.1 Olea europaea HOM05D007842 ORTHO05D009661 3.6e-10 68.9 128 41.4
ECA234G4760 Erigeron canadensis HOM05D007842 ORTHO05D009661 6.1e-10 68.2 112 35.7
Eucgr.B03033 Eucalyptus grandis HOM05D007842 ORTHO05D009661 8.0e-10 67.8 118 38.1
Peaxi162Scf00380g00818 Petunia axillaris HOM05D007842 ORTHO05D009661 1.4e-09 67.0 130 35.4
MSTRG.7679 Avicennia marina HOM05D007842 ORTHO05D009661 5.2e-09 65.1 131 38.2
SalBow8G0003 Salvia bowleyana HOM05D007842 ORTHO05D009661 5.2e-09 65.1 121 38.0
Lsat_1_v5_gn_4_18860 Lactuca sativa HOM05D007842 ORTHO05D009661 6.7e-09 64.7 106 36.8
Nitab4.5_0003642g0020 Nicotiana tabacum HOM05D007842 ORTHO05D009661 6.7e-09 64.7 117 35.9
Solyc05g009650.4 Solanum lycopersicum HOM05D007842 ORTHO05D009661 2.0e-08 63.2 138 34.8
Gohir.A13G053568 Gossypium hirsutum HOM05D007842 ORTHO05D009661 2.6e-08 62.8 71 47.9
Actinidia13668 Actinidia chinensis HOM05D007842 ORTHO05D009661 3.3e-08 62.4 146 34.2
ECA233G2952 Erigeron canadensis HOM05D007842 ORTHO05D009661 3.3e-08 62.4 109 36.7
ECA234G0518 Erigeron canadensis HOM05D007842 ORTHO05D009661 3.3e-08 62.4 112 36.6
Manes.06G070700 Manihot esculenta HOM05D007842 ORTHO05D009661 5.7e-08 61.6 117 41.9
DCAR_023676 Daucus carota HOM05D007842 ORTHO05D009661 7.5e-08 61.2 122 35.2
arahy.Tifrunner.gnm1.ann1.3ZRF2C Arachis hypogaea HOM05D007842 ORTHO05D009661 1.3e-07 60.5 130 33.1
Sopen05g005460 Solanum pennellii HOM05D007842 ORTHO05D009661 1.3e-07 60.5 119 35.3
Gohir.D13G070950 Gossypium hirsutum HOM05D007842 ORTHO05D009661 2.2e-07 59.7 51 56.9
Gorai.013G081200 Gossypium raimondii HOM05D007842 ORTHO05D009661 2.8e-07 59.3 51 56.9
DCAR_026722 Daucus carota HOM05D007842 ORTHO05D009661 4.8e-07 58.5 122 35.2
Lsat_1_v5_gn_3_59860 Lactuca sativa HOM05D007842 ORTHO05D009661 4.8e-07 58.5 91 38.5
Prupe.1G307400 Prunus persica HOM05D007842 ORTHO05D009661 8.2e-07 57.8 130 36.9
PGR119G1821 Punica granatum HOM05D007842 ORTHO05D009661 1.1e-06 57.4 121 35.5
Eucgr.G02340 Eucalyptus grandis HOM05D007842 ORTHO05D009661 1.4e-06 57.0 94 38.3
Phvul.003G028900 Phaseolus vulgaris HOM05D007842 ORTHO05D009661 1.4e-06 57.0 106 35.8
Lsat_1_v5_gn_4_18800 Lactuca sativa HOM05D007842 ORTHO05D009661 4.1e-06 55.5 93 35.5
Lalb_Chr17g0342001 Lupinus albus HOM05D007842 ORTHO05D009661 4.1e-06 55.5 97 36.1
Oeu044385.1 Olea europaea HOM05D007842 ORTHO05D009661 9.1e-06 54.3 75 45.3


User provided reference genes

Program Settings