Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 6.8e-201 703.7 345 100.0
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 1.3e-183 646.4 345 91.6
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 1.6e-133 479.9 353 71.4
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 2.8e-130 469.2 356 69.4
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 2.4e-129 466.1 349 69.1
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 6.9e-129 464.5 350 67.1
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 2.6e-128 462.6 327 70.3
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 6.1e-125 451.4 320 69.4
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 6.1e-125 451.4 352 66.2
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 7.9e-125 451.1 326 69.3
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 1.8e-124 449.9 341 66.0
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 5.1e-124 448.4 344 67.4
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 5.1e-124 448.4 349 67.3
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 1.1e-123 447.2 344 67.2
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-123 446.8 342 67.0
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-123 446.8 342 67.0
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 3.3e-123 445.7 344 66.9
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 2.8e-122 442.6 288 75.7
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 3.7e-122 442.2 344 66.6
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 1.8e-121 439.9 321 69.2
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 1.8e-121 439.9 347 65.7
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 3.1e-121 439.1 326 68.7
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 4.1e-121 438.7 280 75.4
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 6.9e-121 438.0 350 66.6
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.2e-120 437.2 341 65.1
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 1.2e-120 437.2 281 74.0
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 2.6e-120 436.0 289 73.0
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 3.4e-120 435.6 298 70.1
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 5.9e-120 434.9 286 73.1
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 7.7e-120 434.5 352 64.2
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 1.3e-119 433.7 416 56.7
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 8.5e-119 431.0 296 70.9
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 9.4e-118 427.6 338 63.6
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 4.6e-117 425.2 349 61.9
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 4.6e-117 425.2 280 73.6
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 1.8e-116 423.3 312 67.9
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 1.8e-116 423.3 279 71.7
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 2.3e-116 422.9 262 75.6
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 5.1e-116 421.8 311 66.2
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 5.1e-116 421.8 314 69.1
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 8.8e-116 421.0 292 70.2
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 7.4e-115 417.9 262 75.2
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 9.7e-115 417.5 265 73.2
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 9.7e-115 417.5 262 74.8
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 1.7e-114 416.8 263 74.9
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 2.8e-114 416.0 306 68.6
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 3.4e-112 409.1 284 68.3
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 3.4e-112 409.1 326 64.1
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 5.9e-112 408.3 322 64.3
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 7.7e-112 407.9 260 74.2
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.7e-111 406.8 264 75.0
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 8.5e-111 404.4 280 70.4
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 1.4e-110 403.7 284 69.0
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 1.4e-110 403.7 323 63.5
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 1.4e-110 403.7 323 63.5
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 1.9e-110 403.3 285 68.1
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 4.2e-110 402.1 274 69.3
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 5.5e-110 401.7 286 68.9
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 2.1e-109 399.8 335 61.2
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 3.6e-109 399.1 225 82.7
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 1.8e-108 396.7 261 72.4
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 3.0e-108 396.0 257 70.8
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 3.9e-108 395.6 261 72.0
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 3.9e-108 395.6 285 67.7
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 1.3e-106 390.6 225 81.8
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 2.2e-106 389.8 279 67.4
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 2.2e-106 389.8 290 64.1
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 2.8e-106 389.4 297 67.0
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.4e-105 387.1 257 70.4
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 4.1e-105 385.6 275 66.5
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 9.1e-105 384.4 279 67.0
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 1.2e-104 384.0 260 68.5
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 1.2e-104 384.0 268 69.0
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 1.3e-103 380.6 315 60.0
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 3.0e-100 369.4 245 69.0
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 1.2e-99 367.5 300 62.7
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 2.0e-99 366.7 246 67.1
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 1.2e-96 357.5 248 64.9
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 1.2e-96 357.5 261 65.1
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.1e-93 346.7 296 57.4
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 9.8e-91 337.8 353 53.5
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 3.7e-90 335.9 264 62.1
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 8.5e-87 324.7 260 60.8
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 1.8e-84 317.0 181 80.7
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 2.0e-83 313.5 210 71.9
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 1.1e-81 307.8 285 53.0
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 2.4e-81 306.6 181 80.1
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 7.0e-81 305.1 229 62.0
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 2.9e-79 299.7 252 62.7
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 1.0e-76 291.2 325 48.6
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 1.8e-76 290.4 197 68.5
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 4.0e-76 289.3 190 72.1
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 5.2e-76 288.9 178 77.5
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.7e-74 283.9 230 59.6
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 1.7e-74 283.9 230 59.6
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 2.1e-69 266.9 191 67.0
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 4.7e-69 265.8 164 74.4
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 1.8e-68 263.8 259 49.0
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 4.9e-66 255.8 278 45.0
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 6.4e-66 255.4 167 72.5
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.7e-64 250.0 320 45.9
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.7e-64 250.0 320 45.9
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 1.1e-60 238.0 194 62.9
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 8.9e-60 235.0 348 44.0
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 5.4e-57 225.7 225 48.9
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 1.4e-52 211.1 170 62.9
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.9e-49 200.7 130 73.8
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 6.0e-48 195.7 130 72.3
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.2e-42 177.2 130 67.7
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 6.2e-37 159.1 244 36.9
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 6.0e-32 142.5 92 72.8
CDE11G0826 Ceratophyllum demersum HOM05D006863 ORTHO05D009101 3.3e-30 136.7 100 63.0
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 1.4e-25 121.3 275 33.8
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 1.2e-24 118.2 280 32.5
Oeu042053.1 Olea europaea HOM05D006863 ORTHO05D009101 2.1e-24 117.5 74 71.6
Sc04g0006560 Simmondsia chinensis HOM05D006863 ORTHO05D009101 4.8e-21 106.3 158 44.3
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 3.5e-16 90.1 258 29.1
Haze_17459 Corylus avellana HOM05D006863 ORTHO05D044797 3.9e-15 86.7 121 49.6
Psat2g101840 Pisum sativum HOM05D006863 ORTHO05D044797 2.7e-08 63.9 68 51.5


User provided reference genes

Program Settings