Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G126800 Populus trichocarpa HOM05D006290 ORTHO05D007734 1.1e-57 226.5 120 100.0
Sabra10G0096300 Salix brachista HOM05D006290 ORTHO05D007734 1.2e-51 206.5 117 94.0
Potri.008G119300 Populus trichocarpa HOM05D006290 ORTHO05D007734 7.9e-40 167.2 104 82.7
QL01p043858 Quercus lobata HOM05D006290 ORTHO05D007734 4.8e-37 157.9 118 72.0
Atru.chr11.1291 Acer truncatum HOM05D006290 ORTHO05D007734 2.0e-35 152.5 112 73.2
Manes.14G100600 Manihot esculenta HOM05D006290 ORTHO05D007734 2.0e-35 152.5 118 67.8
Dinv21105 Davidia involucrata HOM05D001580 ORTHO05D001517 3.5e-35 151.8 116 69.8
Thecc.02G357300 Theobroma cacao HOM05D006290 ORTHO05D007734 1.7e-34 149.4 117 65.0
Cfa018610 Carpinus fangiana HOM05D006290 ORTHO05D007734 1.9e-33 146.0 117 69.2
Haze_17464 Corylus avellana HOM05D006290 ORTHO05D007734 2.5e-33 145.6 116 69.8
CiPaw.15G083600 Carya illinoinensis HOM05D006290 ORTHO05D007734 4.7e-32 141.4 116 66.4
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 1.0e-31 140.2 126 60.3
Duzib251G0521 Durio zibethinus HOM05D006290 ORTHO05D007734 5.7e-30 134.4 117 61.5
TWI79G1749 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 9.7e-30 133.7 116 60.3
TWI75G0318 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 6.3e-29 131.0 117 62.4
Gohir.A12G168000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 3.1e-28 128.6 117 59.0
Hma1.2p1_3293F.1_g334960 Hydrangea macrophylla HOM05D006290 ORTHO05D007734 5.3e-28 127.9 120 58.3
Gohir.D12G171600 Gossypium hirsutum HOM05D006290 ORTHO05D007734 1.2e-27 126.7 117 58.1
CANSAT64G2445 Cannabis sativa HOM05D006290 ORTHO05D007734 2.0e-27 125.9 119 62.2
Gohir.D13G071500 Gossypium hirsutum HOM05D006290 ORTHO05D007734 2.6e-27 125.6 110 59.1
Gorai.013G081900 Gossypium raimondii HOM05D006290 ORTHO05D007734 2.6e-27 125.6 110 59.1
Duzib268G1644 Durio zibethinus HOM05D006290 ORTHO05D007734 1.7e-26 122.9 117 59.8
Gorai.008G184100 Gossypium raimondii HOM05D006290 ORTHO05D007734 2.9e-26 122.1 118 57.6
Gohir.A13G054000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 5.0e-26 121.3 109 57.8
GSVIVG01011914001 Vitis vinifera HOM05D006290 ORTHO05D007734 1.1e-25 120.2 115 58.3
Glyma.10G275300 Glycine max HOM05D006290 ORTHO05D007734 2.7e-24 115.5 117 53.0
Eucgr.G02333 Eucalyptus grandis HOM05D006290 ORTHO05D007734 3.6e-24 115.2 104 62.5
Manes.06G069950 Manihot esculenta HOM05D006290 ORTHO05D007734 4.7e-24 114.8 77 75.3
Phvul.003G034800 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 6.1e-24 114.4 113 59.3
Glyma.20G114400 Glycine max HOM05D006290 ORTHO05D007734 8.0e-24 114.0 117 53.0
Lj2g0005219 Lotus japonicus HOM05D006290 ORTHO05D007734 1.4e-23 113.2 119 58.0
Lalb_Chr17g0342051 Lupinus albus HOM05D006290 ORTHO05D007734 1.4e-23 113.2 118 55.1
Medtr5g055200 Medicago truncatula HOM05D006290 ORTHO05D007734 2.3e-23 112.5 118 55.1
arahy.Tifrunner.gnm1.ann1.89WS3K Arachis hypogaea HOM05D006290 ORTHO05D007734 4.0e-23 111.7 121 55.4
arahy.Tifrunner.gnm1.ann1.N6V5UD Arachis hypogaea HOM05D006290 ORTHO05D007734 8.8e-23 110.5 121 54.5
Lalb_Chr21g0309011 Lupinus albus HOM05D006290 ORTHO05D007734 8.8e-23 110.5 120 53.3
TPR.G26319 Trifolium pratense HOM05D006290 ORTHO05D007734 2.6e-22 109.0 122 51.6
Glyma.01G082500 Glycine max HOM05D006290 ORTHO05D007734 7.5e-22 107.5 116 57.8
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 7.5e-22 107.5 86 65.1
MD13G1043600 Malus domestica HOM05D006290 ORTHO05D007734 9.7e-22 107.1 103 56.3
vmacro10549 Vaccinium macrocarpon HOM05D006290 ORTHO05D007734 9.7e-22 107.1 116 55.2
Lalb_Chr10g0099941 Lupinus albus HOM05D006290 ORTHO05D007734 1.7e-21 106.3 116 54.3
Lj5g0001389 Lotus japonicus HOM05D006290 ORTHO05D007734 3.7e-21 105.1 123 52.0
Phvul.007G026200 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 3.7e-21 105.1 115 50.4
FvH4_4g27620 Fragaria vesca HOM05D006290 ORTHO05D007734 4.8e-21 104.8 104 53.8
EL10Ac6g14437 Beta vulgaris HOM05D006290 ORTHO05D007734 3.1e-20 102.1 101 54.5
TPR.G38332 Trifolium pratense HOM05D006290 ORTHO05D007734 3.1e-20 102.1 118 52.5
Glyma.08G263700 Glycine max HOM05D006290 ORTHO05D007734 4.1e-20 101.7 116 56.0
THA.LOC104821947 Tarenaya hassleriana HOM05D006290 ORTHO05D007734 7.0e-20 100.9 117 53.0
Medtr1g111150 Medicago truncatula HOM05D006290 ORTHO05D007734 9.1e-20 100.5 102 57.8
Ciclev10033212m.g Citrus clementina HOM05D006290 ORTHO05D007734 1.2e-19 100.1 81 67.9
DCAR_007237 Daucus carota HOM05D006290 ORTHO05D007734 5.9e-19 97.8 106 51.9
Nitab4.5_0001914g0020 Nicotiana tabacum HOM05D006290 ORTHO05D007734 1.3e-18 96.7 105 51.4
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 1.7e-18 96.3 79 64.6
Psat6g229000 Pisum sativum HOM05D006290 ORTHO05D007734 2.9e-18 95.5 110 53.6
PGR119G1521 Punica granatum HOM05D006290 ORTHO05D007734 2.9e-18 95.5 92 55.4
Ca_11183_v3 Cicer arietinum L. HOM05D006290 ORTHO05D007734 1.1e-17 93.6 115 51.3
Oeu033294.1 Olea europaea HOM05D006290 ORTHO05D007734 1.1e-17 93.6 121 46.3
Actinidia16641 Actinidia chinensis HOM05D006290 ORTHO05D007734 1.5e-17 93.2 89 59.6
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 1.5e-17 93.2 81 67.9
Sc14g0007550 Simmondsia chinensis HOM05D006290 ORTHO05D007734 1.9e-17 92.8 91 52.7
Aa31sc179G60 Aethionema arabicum HOM05D006290 ORTHO05D007734 4.2e-17 91.7 92 56.5
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 7.2e-17 90.9 135 42.2
FAN12G1280 Fragaria x ananassa HOM05D006290 ORTHO05D007734 7.2e-17 90.9 129 43.4
AL2G27490 Arabidopsis lyrata HOM05D006290 ORTHO05D007734 9.4e-17 90.5 103 53.4
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 9.4e-17 90.5 135 42.2
MBI12_g30235_MAGBIO Magnolia biondii HOM05D006290 ORTHO05D007734 9.4e-17 90.5 106 51.9
Peaxi162Scf00004g01813 Petunia axillaris HOM05D006290 ORTHO05D007734 1.2e-16 90.1 119 47.9
AT1G68585 Arabidopsis thaliana HOM05D006290 ORTHO05D007734 2.1e-16 89.4 103 52.4
Carub.0002s1512 Capsella rubella HOM05D006290 ORTHO05D007734 2.7e-16 89.0 103 53.4
Nn4g23807 Nelumbo nucifera HOM05D006290 ORTHO05D007734 2.7e-16 89.0 104 51.0
BcaC08g45955 Brassica carinata HOM05D006290 ORTHO05D007734 4.7e-16 88.2 96 52.1
SGA_v2.0_scaffold124G33547 Striga asiatica HOM05D006290 ORTHO05D007734 4.7e-16 88.2 120 48.3
BcaC03g14971 Brassica carinata HOM05D006290 ORTHO05D007734 8.0e-16 87.4 104 48.1
MSTRG.826 Avicennia marina HOM05D006290 ORTHO05D007734 1.8e-15 86.3 93 51.6
CARHR061380 Cardamine hirsuta HOM05D006290 ORTHO05D007734 1.8e-15 86.3 87 57.5
Migut.L01076 Erythranthe guttata HOM05D006290 ORTHO05D007734 1.8e-15 86.3 119 47.1
Nitab4.5_0003285g0030 Nicotiana tabacum HOM05D006290 ORTHO05D007734 1.8e-15 86.3 132 41.7
DCAR_023668 Daucus carota HOM05D000325 ORTHO05D002981 2.3e-15 85.9 101 52.5
BcaB03g15431 Brassica carinata HOM05D006290 ORTHO05D007734 3.0e-15 85.5 96 51.0
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 4.0e-15 85.1 74 66.2
Hund05756 Selenicereus undatus HOM05D006290 ORTHO05D007734 4.0e-15 85.1 89 52.8
ClCG05G022830 Citrullus lanatus HOM05D006290 ORTHO05D007734 5.2e-15 84.7 81 59.3
Thhalv10019326m.g Eutrema salsugineum HOM05D006290 ORTHO05D007734 5.2e-15 84.7 95 51.6
MSTRG.13517 Avicennia marina HOM05D006290 ORTHO05D007734 6.8e-15 84.3 90 48.9
CsaV3_5G034200 Cucumis sativus L. HOM05D006290 ORTHO05D007734 8.8e-15 84.0 106 49.1
C06p37490 Brassica napus HOM05D006290 ORTHO05D007734 1.2e-14 83.6 97 51.5
BolC6t38851H Brassica oleracea HOM05D006290 ORTHO05D007734 1.2e-14 83.6 97 51.5
BraA07t30820Z Brassica rapa HOM05D006290 ORTHO05D007734 1.2e-14 83.6 97 51.5
BolC2t08586H Brassica oleracea HOM05D006290 ORTHO05D007734 1.5e-14 83.2 105 47.6
HanXRQChr17g0567961 Helianthus annuus HOM05D006290 ORTHO05D007734 2.6e-14 82.4 106 49.1
BcaB05g24400 Brassica carinata HOM05D006290 ORTHO05D007734 3.4e-14 82.0 105 47.6
Sp5g23690 Schrenkiella parvula HOM05D006290 ORTHO05D007734 3.4e-14 82.0 103 49.5
A07p31920 Brassica napus HOM05D006290 ORTHO05D007734 4.4e-14 81.6 70 61.4
C02p25020 Brassica napus HOM05D006290 ORTHO05D007734 4.4e-14 81.6 105 47.6
BraA02t06584Z Brassica rapa HOM05D006290 ORTHO05D007734 5.7e-14 81.3 105 47.6
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 5.7e-14 81.3 88 50.0
Lsat_1_v5_gn_4_18480 Lactuca sativa HOM05D006290 ORTHO05D007734 7.5e-14 80.9 124 43.5
A02p15210 Brassica napus HOM05D006290 ORTHO05D007734 9.8e-14 80.5 105 47.6
ECA234G1725 Erigeron canadensis HOM05D006290 ORTHO05D007734 1.7e-13 79.7 124 41.1
Aqoxy3G00325 Aquilegia oxysepala HOM05D006290 ORTHO05D007734 2.8e-13 79.0 96 45.8
Sed0010442 Sechium edule HOM05D006290 ORTHO05D007734 4.8e-13 78.2 114 40.4
HanXRQChr16g0529651 Helianthus annuus HOM05D006290 ORTHO05D007734 1.1e-12 77.0 105 42.9
CiPaw.16G064000 Carya illinoinensis HOM05D006290 ORTHO05D007734 1.8e-12 76.3 69 60.9
AUR62002889 Chenopodium quinoa HOM05D006290 ORTHO05D007734 3.1e-12 75.5 63 57.1
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 4.1e-12 75.1 92 46.7
Oeu020586.1 Olea europaea HOM05D006290 ORTHO05D007734 9.1e-12 73.9 105 43.8
CAN.G257.59 Capsicum annuum HOM05D006290 ORTHO05D007734 1.6e-11 73.2 91 45.1
Peaxi162Scf00634g00115 Petunia axillaris HOM05D006290 ORTHO05D007734 5.0e-10 68.2 82 47.6
PGSC0003DMG400021769 Solanum tuberosum HOM05D006290 ORTHO05D007734 8.6e-10 67.4 83 45.8
VMungo0720G2407 Vigna mungo HOM05D006290 ORTHO05D007734 8.6e-10 67.4 66 50.0
HanXRQChr15g0477181 Helianthus annuus HOM05D006290 ORTHO05D007734 1.1e-09 67.0 106 45.3
Cc04_g07230 Coffea canephora HOM05D006290 ORTHO05D007734 1.5e-09 66.6 77 45.5
Prupe.1G308900 Prunus persica HOM05D006290 ORTHO05D007734 3.3e-09 65.5 52 71.2
Solyc12g150113.1 Solanum lycopersicum HOM05D006290 ORTHO05D007734 3.3e-09 65.5 83 43.4
Sopen12g017530 Solanum pennellii HOM05D006290 ORTHO05D007734 3.3e-09 65.5 83 43.4
Actinidia14876 Actinidia chinensis HOM05D006290 ORTHO05D007734 4.2e-09 65.1 70 57.1
Cfa019791 Carpinus fangiana HOM05D006108 ORTHO05D007605 4.7e-08 61.6 72 47.2
ECA246G4651 Erigeron canadensis HOM05D006290 ORTHO05D007734 1.4e-07 60.1 82 47.6
HanXRQChr17g0552191 Helianthus annuus HOM05D006290 ORTHO05D007734 1.4e-07 60.1 102 40.2
MELO3C012234.2 Cucumis melo HOM05D006290 ORTHO05D007734 1.8e-07 59.7 53 56.6
MD16G1044400 Malus domestica HOM05D006290 ORTHO05D007734 3.0e-07 58.9 45 62.2
Potri.015G053600 Populus trichocarpa HOM05D006290 ORTHO05D007734 3.0e-07 58.9 65 49.2
unitig_26.g10264 Utricularia gibba HOM05D000483 ORTHO05D000158 3.0e-07 58.9 71 46.5
BcaC08g45952 Brassica carinata HOM05D006290 ORTHO05D007734 4.0e-07 58.5 50 62.0
Sed0022191 Sechium edule HOM05D006290 ORTHO05D007734 1.2e-06 57.0 123 34.1
Nitab4.5_0009642g0010 Nicotiana tabacum HOM05D006290 ORTHO05D007734 1.5e-06 56.6 88 39.8
C06p41250 Brassica napus HOM05D006290 ORTHO05D007734 2.6e-06 55.8 47 59.6
Solyc05g150121.1 Solanum lycopersicum HOM05D006290 ORTHO05D007734 2.6e-06 55.8 67 50.7
Migut.I00370 Erythranthe guttata HOM05D006290 ORTHO05D007734 3.4e-06 55.5 91 40.7
SalBow8G3983 Salvia bowleyana HOM05D006290 ORTHO05D007734 3.4e-06 55.5 42 64.3
SEGI_37200 Sequoiadendron giganteum HOM05D008102 ORTHO05D010266 9.8e-06 53.9 54 46.3


User provided reference genes

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