Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 3.7e-85 318.2 161 100.0
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 7.3e-65 250.8 163 82.8
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 5.1e-50 201.4 164 70.7
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 1.4e-44 183.3 149 70.5
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 1.1e-41 173.7 164 61.0
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 3.3e-41 172.2 163 62.6
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 1.3e-40 170.2 164 62.2
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 8.4e-37 157.5 162 54.9
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.6e-35 153.3 167 53.3
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 7.9e-35 151.0 172 57.0
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 1.9e-33 146.4 169 54.4
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.6e-32 143.3 166 56.6
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 1.1e-31 140.6 164 52.4
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 7.6e-30 134.4 174 51.7
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 1.0e-29 134.0 143 53.1
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 1.3e-29 133.7 165 46.7
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 2.1e-27 126.3 173 45.1
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 3.6e-27 125.6 170 48.2
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 3.6e-27 125.6 170 47.6
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 4.6e-27 125.2 170 48.8
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 6.7e-26 121.3 142 53.5
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.5e-25 120.2 169 45.6
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 2.5e-25 119.4 167 46.1
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 4.3e-25 118.6 167 47.9
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 4.3e-25 118.6 173 45.7
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 1.3e-24 117.1 171 45.0
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.2e-24 116.3 173 43.4
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 2.8e-24 115.9 174 47.1
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 2.8e-24 115.9 174 47.1
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 4.8e-24 115.2 168 45.8
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 1.1e-23 114.0 172 43.6
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 1.4e-23 113.6 167 45.5
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 2.4e-23 112.8 170 44.1
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 9.1e-23 110.9 173 42.8
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 1.5e-22 110.2 161 44.1
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 2.6e-22 109.4 162 45.7
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 3.4e-22 109.0 164 43.9
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 1.3e-21 107.1 167 44.9
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 1.3e-21 107.1 169 39.1
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.9e-21 105.9 155 45.2
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 2.9e-21 105.9 173 42.8
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 3.8e-21 105.5 165 42.4
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 5.0e-21 105.1 167 42.5
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 1.4e-20 103.6 162 43.2
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 1.2e-19 100.5 165 43.6
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 1.6e-19 100.1 147 46.9
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 2.1e-19 99.8 128 43.8
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 2.7e-19 99.4 159 37.7
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 2.7e-19 99.4 172 43.0
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 3.6e-19 99.0 164 42.1
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 1.4e-18 97.1 166 41.0
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 5.1e-18 95.1 161 41.6
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 5.1e-18 95.1 163 38.7
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 2.0e-17 93.2 155 43.2
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 3.3e-17 92.4 140 37.9
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 4.4e-17 92.0 165 37.6
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 1.7e-16 90.1 165 38.2
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 1.7e-16 90.1 163 39.3
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 2.2e-16 89.7 166 41.6
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 2.8e-16 89.4 167 37.1
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 2.8e-16 89.4 160 37.5
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 4.8e-16 88.6 166 38.0
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 4.8e-16 88.6 166 38.0
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 4.8e-16 88.6 166 38.0
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 1.1e-15 87.4 134 41.0
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 2.4e-15 86.3 165 42.4
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 4.1e-15 85.5 181 38.7
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 6.9e-15 84.7 159 44.0
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 4.5e-14 82.0 174 39.1
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 1.0e-13 80.9 152 43.4
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 1.0e-13 80.9 162 35.8
Lsat_1_v5_gn_3_57941 Lactuca sativa HOM05D007903 ORTHO05D009925 1.1e-09 67.4 100 46.0
SalBow8G0258 Salvia bowleyana HOM05D065226 ORTHO05D009925 3.7e-08 62.4 152 32.9
SalBow8G1517 Salvia bowleyana HOM05D065226 ORTHO05D009925 3.7e-08 62.4 152 32.9
HPP92_004796 Vanilla planifolia HOM05D007903 ORTHO05D009925 4.1e-07 58.9 168 35.7
Os01g0133200 Oryza sativa ssp. japonica HOM05D007903 ORTHO05D009925 1.2e-06 57.4 175 32.6


User provided reference genes

Program Settings