Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G108350 Populus trichocarpa HOM05D004417 ORTHO05D005528 1.7e-109 399.4 209 100.0
Potri.008G133300 Populus trichocarpa HOM05D004417 ORTHO05D005528 7.8e-67 257.7 142 91.5
GSVIVG01011680001 Vitis vinifera HOM05D004417 ORTHO05D005528 2.3e-63 246.1 142 86.6
CSS0010110 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 5.2e-63 245.0 142 85.9
CSS0030927 Camellia sinensis var. sinensis HOM05D004417 ORTHO05D005528 5.2e-63 245.0 142 85.9
Manes.17G082000 Manihot esculenta HOM05D004417 ORTHO05D005528 8.9e-63 244.2 142 86.6
Atru.chr11.518 Acer truncatum HOM05D004417 ORTHO05D005528 1.5e-62 243.4 142 85.9
Dinv26250 Davidia involucrata HOM05D004417 ORTHO05D005528 9.8e-62 240.7 141 85.1
TWI74G0839 Tripterygium wilfordii HOM05D004417 ORTHO05D005528 9.8e-62 240.7 142 83.8
Ciclev10014030m.g Citrus clementina HOM05D004417 ORTHO05D005528 4.9e-61 238.4 142 83.8
Prupe.1G331400 Prunus persica HOM05D004417 ORTHO05D005528 1.1e-60 237.3 141 83.7
CANSAT01G0135 Cannabis sativa HOM05D004417 ORTHO05D005528 2.4e-60 236.1 142 82.4
Eucgr.B02952 Eucalyptus grandis HOM05D004417 ORTHO05D005528 2.4e-60 236.1 142 82.4
Medtr1g031910 Medicago truncatula HOM05D004417 ORTHO05D005528 2.4e-60 236.1 142 81.7
Duzib251G0182 Durio zibethinus HOM05D004417 ORTHO05D005528 3.2e-60 235.7 142 81.0
Lj3A865G68 Lonicera japonica HOM05D004417 ORTHO05D005528 1.2e-59 233.8 146 80.8
Nitab4.5_0000018g0020 Nicotiana tabacum HOM05D004417 ORTHO05D005528 1.6e-59 233.4 142 81.0
RcHm_v2.0_Chr4g0443371 Rosa chinensis HOM05D004417 ORTHO05D005528 1.6e-59 233.4 141 80.9
BcaC06g35029 Brassica carinata HOM05D004417 ORTHO05D005528 2.1e-59 233.0 142 78.9
A07p13940 Brassica napus HOM05D004417 ORTHO05D005528 2.1e-59 233.0 142 78.9
C07p20490 Brassica napus HOM05D004417 ORTHO05D005528 2.1e-59 233.0 142 78.9
BraA07t29150Z Brassica rapa HOM05D004417 ORTHO05D005528 2.1e-59 233.0 142 78.9
BolC7t42575H Brassica oleracea HOM05D004417 ORTHO05D005528 2.7e-59 232.6 142 78.9
Eucgr.B02949 Eucalyptus grandis HOM05D004417 ORTHO05D005528 2.7e-59 232.6 142 81.0
FAN17G2093 Fragaria x ananassa HOM05D004417 ORTHO05D005528 2.7e-59 232.6 141 80.9
MD16G1020900 Malus domestica HOM05D004417 ORTHO05D005528 3.5e-59 232.3 141 81.6
Actinidia25662 Actinidia chinensis HOM05D004417 ORTHO05D005528 4.6e-59 231.9 142 81.7
Actinidia25877 Actinidia chinensis HOM05D004417 ORTHO05D005528 4.6e-59 231.9 142 81.7
BcaB07g32314 Brassica carinata HOM05D004417 ORTHO05D005528 6.0e-59 231.5 142 78.9
FAN07G1109 Fragaria x ananassa HOM05D004417 ORTHO05D005528 6.0e-59 231.5 141 80.1
Lj2g0013863 Lotus japonicus HOM05D004417 ORTHO05D005528 7.8e-59 231.1 142 79.6
CARHR023690 Cardamine hirsuta HOM05D004417 ORTHO05D005528 1.0e-58 230.7 142 78.2
BcaB03g14154 Brassica carinata HOM05D004417 ORTHO05D005528 1.3e-58 230.3 142 77.5
TPR.G36876 Trifolium pratense HOM05D004417 ORTHO05D005528 1.3e-58 230.3 142 79.6
Carub.0001s2282 Capsella rubella HOM05D004417 ORTHO05D005528 1.7e-58 229.9 142 77.5
Glyma.09G123500 Glycine max HOM05D004417 ORTHO05D005528 2.3e-58 229.6 142 78.9
BraA09t39644Z Brassica rapa HOM05D004417 ORTHO05D005528 3.0e-58 229.2 142 76.8
C05p22460 Brassica napus HOM05D004417 ORTHO05D005528 3.9e-58 228.8 142 77.5
ECA246G0702 Erigeron canadensis HOM05D004417 ORTHO05D005528 5.1e-58 228.4 141 78.7
Gohir.A03G118100 Gossypium hirsutum HOM05D004417 ORTHO05D005528 5.1e-58 228.4 142 80.3
Gohir.D02G141800 Gossypium hirsutum HOM05D004417 ORTHO05D005528 5.1e-58 228.4 142 80.3
Gorai.005G158900 Gossypium raimondii HOM05D004417 ORTHO05D005528 5.1e-58 228.4 142 80.3
Thecc.02G290300 Theobroma cacao HOM05D004417 ORTHO05D005528 5.1e-58 228.4 142 80.3
A09p41530 Brassica napus HOM05D004417 ORTHO05D005528 6.6e-58 228.0 142 77.5
Phvul.003G021100 Phaseolus vulgaris HOM05D004417 ORTHO05D005528 6.6e-58 228.0 142 78.2
VMungo1215G0458 Vigna mungo HOM05D004417 ORTHO05D005528 6.6e-58 228.0 142 78.2
BcaB07g32312 Brassica carinata HOM05D004417 ORTHO05D005528 8.6e-58 227.6 142 77.5
BcaC05g26233 Brassica carinata HOM05D004417 ORTHO05D005528 8.6e-58 227.6 142 77.5
Oeu018613.1 Olea europaea HOM05D004417 ORTHO05D005528 8.6e-58 227.6 142 77.5
BolC5t30944H Brassica oleracea HOM05D004417 ORTHO05D005528 1.1e-57 227.3 142 76.8
MD13G1030100 Malus domestica HOM05D004417 ORTHO05D005528 1.1e-57 227.3 141 79.4
MSTRG.7613 Avicennia marina HOM05D004417 ORTHO05D005528 1.5e-57 226.9 142 80.3
Cc11_g08040 Coffea canephora HOM05D004417 ORTHO05D005528 1.5e-57 226.9 142 78.9
HanXRQChr17g0567351 Helianthus annuus HOM05D004417 ORTHO05D005528 1.5e-57 226.9 141 78.7
Lsat_1_v5_gn_3_55840 Lactuca sativa HOM05D004417 ORTHO05D005528 1.5e-57 226.9 141 77.3
Solyc05g016440.3 Solanum lycopersicum HOM05D004417 ORTHO05D005528 1.5e-57 226.9 142 77.5
Sopen05g013790 Solanum pennellii HOM05D004417 ORTHO05D005528 1.5e-57 226.9 142 77.5
Ca_12568_v3 Cicer arietinum L. HOM05D004417 ORTHO05D005528 1.9e-57 226.5 141 78.7
Nitab4.5_0008542g0030 Nicotiana tabacum HOM05D004417 ORTHO05D005528 1.9e-57 226.5 142 78.9
Sed0000894 Sechium edule HOM05D004417 ORTHO05D005528 1.9e-57 226.5 142 78.2
ClCG01G006440 Citrullus lanatus HOM05D004417 ORTHO05D005528 2.5e-57 226.1 142 78.9
Migut.L00554 Erythranthe guttata HOM05D004417 ORTHO05D005528 2.5e-57 226.1 142 78.2
FvH4_4g33860 Fragaria vesca HOM05D004417 ORTHO05D005528 2.5e-57 226.1 141 78.7
FAN12G0749 Fragaria x ananassa HOM05D004417 ORTHO05D005528 2.5e-57 226.1 141 78.7
TAR374G0310 Trochodendron aralioides HOM05D004417 ORTHO05D005528 2.5e-57 226.1 142 83.1
CsaV3_5G028240 Cucumis sativus L. HOM05D004417 ORTHO05D005528 3.3e-57 225.7 142 78.9
SalBow8G1470 Salvia bowleyana HOM05D004417 ORTHO05D005528 3.3e-57 225.7 142 78.9
PGR042G0049 Punica granatum HOM05D004417 ORTHO05D005528 4.3e-57 225.3 142 78.9
Thhalv10006548m.g Eutrema salsugineum HOM05D004417 ORTHO05D005528 5.6e-57 224.9 142 77.5
Sp1g20700 Schrenkiella parvula HOM05D004417 ORTHO05D005528 5.6e-57 224.9 142 76.1
Lalb_Chr13g0290691 Lupinus albus HOM05D004417 ORTHO05D005528 7.3e-57 224.6 142 78.2
THA.LOC104822992 Tarenaya hassleriana HOM05D004417 ORTHO05D005528 1.2e-56 223.8 142 76.1
AL1G37020 Arabidopsis lyrata HOM05D004417 ORTHO05D005528 1.6e-56 223.4 142 74.6
PSO017G2325 Papaver somniferum HOM05D004417 ORTHO05D005528 2.1e-56 223.0 142 78.2
arahy.Tifrunner.gnm1.ann1.W0X7A3 Arachis hypogaea HOM05D004417 ORTHO05D005528 2.8e-56 222.6 142 76.8
AT1G23230 Arabidopsis thaliana HOM05D004417 ORTHO05D005528 3.6e-56 222.2 142 74.6
PSO478G2641 Papaver somniferum HOM05D004417 ORTHO05D005528 3.6e-56 222.2 142 78.9
AUR62038465 Chenopodium quinoa HOM05D004417 ORTHO05D005528 4.7e-56 221.9 142 76.8
PGR042G2175 Punica granatum HOM05D004417 ORTHO05D005528 6.2e-56 221.5 142 76.8
Ah.03g137400 Amaranthus hybridus HOM05D004417 ORTHO05D005528 8.1e-56 221.1 142 76.8
Aa31LG7G7270 Aethionema arabicum HOM05D004417 ORTHO05D005528 1.4e-55 220.3 142 74.6
AUR62014157 Chenopodium quinoa HOM05D004417 ORTHO05D005528 1.4e-55 220.3 142 76.1
EL10Ac6g14152 Beta vulgaris HOM05D004417 ORTHO05D005528 3.1e-55 219.2 142 76.8
Psat6g045000 Pisum sativum HOM05D004417 ORTHO05D005528 3.1e-55 219.2 142 76.1
Lalb_Chr16g0387721 Lupinus albus HOM05D004417 ORTHO05D005528 8.9e-55 217.6 142 75.4
vmacro00393 Vaccinium macrocarpon HOM05D004417 ORTHO05D005528 1.5e-54 216.9 128 83.6
SGA_v2.0_scaffold50G18460 Striga asiatica HOM05D004417 ORTHO05D005528 4.4e-54 215.3 142 73.2
Nn4g24297 Nelumbo nucifera HOM05D004417 ORTHO05D005528 9.9e-54 214.2 142 76.8
ATR0753G138 Amborella trichopoda HOM05D004417 ORTHO05D005528 1.1e-52 210.7 141 75.9
Aqoxy3G00033 Aquilegia oxysepala HOM05D004417 ORTHO05D005528 1.1e-52 210.7 142 76.1
Os02g0732700 Oryza sativa ssp. japonica HOM05D004417 ORTHO05D005528 2.4e-52 209.5 141 73.8
CDE07G0372 Ceratophyllum demersum HOM05D004417 ORTHO05D005528 1.2e-51 207.2 141 73.0
Rhsim09G0063500 Rhododendron simsii HOM05D004417 ORTHO05D005528 3.5e-51 205.7 140 75.0
Zm00001eb253700 Zea mays HOM05D004417 ORTHO05D005528 4.6e-51 205.3 143 72.0
DCAR_007321 Daucus carota HOM05D004417 ORTHO05D005528 1.1e-49 200.7 142 72.5
unitig_899.g15633 Utricularia gibba HOM05D004417 ORTHO05D005528 1.1e-49 200.7 148 66.9
QL03p034852 Quercus lobata HOM05D004417 ORTHO05D005528 7.3e-49 198.0 125 80.8
Dinv18635 Davidia involucrata HOM05D004417 ORTHO05D005528 4.0e-47 192.2 111 83.8
MELO3C005286.2 Cucumis melo HOM05D004417 ORTHO05D005528 5.2e-47 191.8 142 71.1
Sabra08G0101900 Salix brachista HOM05D004417 ORTHO05D005528 2.0e-46 189.9 304 42.1
SEGI_15839 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 3.4e-46 189.1 192 54.2
DCAR_030256 Daucus carota HOM05D004417 ORTHO05D005528 2.5e-41 172.9 141 60.3
HanXRQChr17g0566691 Helianthus annuus HOM05D004417 ORTHO05D005528 5.6e-41 171.8 141 62.4
Sc14g0006960 Simmondsia chinensis HOM05D004417 ORTHO05D005528 5.6e-41 171.8 107 77.6
Lsat_1_v5_gn_4_12821 Lactuca sativa HOM05D004417 ORTHO05D005528 9.6e-41 171.0 143 61.5
arahy.Tifrunner.gnm1.ann1.GYT9TN Arachis hypogaea HOM05D004417 ORTHO05D005528 3.6e-40 169.1 142 62.0
Mapoly0005s0093 Marchantia polymorpha HOM05D004417 ORTHO05D005528 6.4e-37 158.3 141 54.6
CiPaw.05G190600 Carya illinoinensis HOM05D004417 ORTHO05D005528 5.4e-36 155.2 94 85.1
Peaxi162Scf00376g00324 Petunia axillaris HOM05D004417 ORTHO05D005528 1.3e-34 150.6 97 77.3
Pp3c27_2940 Physcomitrium patens HOM05D004417 ORTHO05D005528 1.5e-33 147.1 142 52.8
SMO364G0727 Selaginella moellendorffii HOM05D004417 ORTHO05D005528 2.8e-32 142.9 141 47.5
Haze_10916 Corylus avellana HOM05D004417 ORTHO05D005528 3.5e-19 99.4 73 65.8
COL.COLO4_13080 Corchorus olitorius HOM05D004417 ORTHO05D005528 3.3e-17 92.8 45 95.6
Peaxi162Scf00376g00032 Petunia axillaris HOM05D004417 ORTHO05D005528 3.3e-17 92.8 49 85.7
HPP92_024819 Vanilla planifolia HOM05D004417 ORTHO05D005528 8.2e-16 88.2 82 59.8
Hund24934 Selenicereus undatus HOM05D004417 ORTHO05D005528 5.5e-12 75.5 66 57.6
SEGI_38026 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.6e-11 73.9 49 67.3
SEGI_21450 Sequoiadendron giganteum HOM05D004417 ORTHO05D005528 1.8e-10 70.5 47 68.1
SHI04465 Sapria himalayana HOM05D004417 ORTHO05D005528 1.5e-09 67.4 46 63.0
Cpa.g.sc2.214 Carica papaya HOM05D004417 ORTHO05D005528 4.3e-09 65.9 32 93.8


User provided reference genes

Program Settings