Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G106950 Populus trichocarpa HOM05D001218 ORTHO05D022331 1.7e-47 192.2 88 100.0
Sabra05G0199700 Salix brachista HOM05D001218 ORTHO05D004088 1.0e-15 86.7 45 86.7
Potri.005G257800 Populus trichocarpa HOM05D001218 ORTHO05D004088 1.3e-15 86.3 45 86.7
CANSAT25G3586 Cannabis sativa HOM05D001218 ORTHO05D004088 2.9e-15 85.1 45 84.4
CiPaw.08G078100 Carya illinoinensis HOM05D001218 ORTHO05D004088 2.9e-15 85.1 45 84.4
Dinv23340 Davidia involucrata HOM05D001218 ORTHO05D004088 2.9e-15 85.1 45 84.4
AL1G33980 Arabidopsis lyrata HOM05D001218 ORTHO05D004088 3.8e-15 84.7 48 79.2
Carub.0001s2042 Capsella rubella HOM05D001218 ORTHO05D004088 3.8e-15 84.7 48 79.2
CARHR021410 Cardamine hirsuta HOM05D001218 ORTHO05D004088 3.8e-15 84.7 48 79.2
SGA_v2.0_scaffold161G37861 Striga asiatica HOM05D001218 ORTHO05D004088 3.8e-15 84.7 45 84.4
CARHR070100 Cardamine hirsuta HOM05D001218 ORTHO05D004088 5.0e-15 84.3 45 82.2
Cfa014150 Carpinus fangiana HOM05D001218 ORTHO05D004088 5.0e-15 84.3 45 84.4
CiPaw.07G131800 Carya illinoinensis HOM05D001218 ORTHO05D004088 5.0e-15 84.3 45 82.2
Haze_22874 Corylus avellana HOM05D001218 ORTHO05D004088 5.0e-15 84.3 45 84.4
MBI04_g42538_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 5.0e-15 84.3 47 80.9
Prupe.5G003400 Prunus persica HOM05D001218 ORTHO05D004088 5.0e-15 84.3 45 82.2
Sabra02G0002000 Salix brachista HOM05D001218 ORTHO05D004088 5.0e-15 84.3 45 84.4
Cpa.g.c24967.5 Carica papaya HOM05D001218 ORTHO05D004088 6.5e-15 84.0 45 82.2
Peaxi162Scf00064g01432 Petunia axillaris HOM05D001218 ORTHO05D004088 6.5e-15 84.0 45 82.2
Aa31LG7G5130 Aethionema arabicum HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
AT1G20950 Arabidopsis thaliana HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
BcaB03g12841 Brassica carinata HOM05D001218 ORTHO05D004088 8.5e-15 83.6 48 77.1
BcaB07g32089 Brassica carinata HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
BcaC05g26002 Brassica carinata HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
BcaC07g39066 Brassica carinata HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
A06p16940 Brassica napus HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
A08p29140 Brassica napus HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
C05p19600 Brassica napus HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
C08p20520 Brassica napus HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
BolC5t30663H Brassica oleracea HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
BolC8t49679H Brassica oleracea HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
BraA06t24804Z Brassica rapa HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
BraA08t34850Z Brassica rapa HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
Thhalv10007087m.g Eutrema salsugineum HOM05D001218 ORTHO05D004088 8.5e-15 83.6 45 82.2
Duzib093G2014 Durio zibethinus HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
Duzib116G0454 Durio zibethinus HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
Gohir.A02G087100 Gossypium hirsutum HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
Gohir.D02G101900 Gossypium hirsutum HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
Gorai.005G115600 Gossypium raimondii HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
Solyc12g095760.2 Solanum lycopersicum HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
Sopen12g031660 Solanum pennellii HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
PGSC0003DMG400029309 Solanum tuberosum HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
THA.LOC104804960 Tarenaya hassleriana HOM05D001218 ORTHO05D004088 1.1e-14 83.2 45 80.0
CAN.G1330.23 Capsicum annuum HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
CAN.G208.42 Capsicum annuum HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
MD06G1002300 Malus domestica HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
Nitab4.5_0000464g0120 Nicotiana tabacum HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
Nitab4.5_0001309g0150 Nicotiana tabacum HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
Nitab4.5_0003423g0060 Nicotiana tabacum HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
Peaxi162Scf00385g00622 Petunia axillaris HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
QL02p016004 Quercus lobata HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
Sp5g31710 Schrenkiella parvula HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
TAR628G0316 Trochodendron aralioides HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
GSVIVG01013442001 Vitis vinifera HOM05D001218 ORTHO05D004088 1.4e-14 82.8 45 80.0
EL10Ac1g01822 Beta vulgaris HOM05D001218 ORTHO05D004088 1.9e-14 82.4 45 80.0
Hma1.2p1_0489F.1_g164180 Hydrangea macrophylla HOM05D001218 ORTHO05D004088 1.9e-14 82.4 45 80.0
Oeu042498.1 Olea europaea HOM05D001218 ORTHO05D004088 1.9e-14 82.4 45 80.0
Sc02g0009320 Simmondsia chinensis HOM05D001218 ORTHO05D004088 1.9e-14 82.4 45 80.0
TAR376G0228 Trochodendron aralioides HOM05D001218 ORTHO05D004088 1.9e-14 82.4 45 80.0
Actinidia37903 Actinidia chinensis HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 80.0
AL2G36690 Arabidopsis lyrata HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 77.8
AT1G76550 Arabidopsis thaliana HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 77.8
C06p50810 Brassica napus HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 80.0
Migut.C00344 Erythranthe guttata HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 80.0
Hma1.2p1_0810F.1_g221990 Hydrangea macrophylla HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 80.0
Lj4C3G12 Lonicera japonica HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 80.0
PSO017G6550 Papaver somniferum HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 77.8
PSO170G0003 Papaver somniferum HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 77.8
Sp1g18650 Schrenkiella parvula HOM05D001218 ORTHO05D004088 2.5e-14 82.0 45 80.0
MSTRG.24899 Avicennia marina HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 82.2
BcaC08g47163 Brassica carinata HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 77.8
BcaC08g47232 Brassica carinata HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 77.8
A07p42210 Brassica napus HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 77.8
BraA07t31750Z Brassica rapa HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 77.8
Carub.0002s2346 Capsella rubella HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 77.8
ClCG11G019100 Citrullus lanatus HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 80.0
MELO3C017063.2 Cucumis melo HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 80.0
CsaV3_4G037690 Cucumis sativus L. HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 80.0
Thhalv10018291m.g Eutrema salsugineum HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 77.8
Rhsim06G0002000 Rhododendron simsii HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 80.0
Thecc.08G098300 Theobroma cacao HOM05D001218 ORTHO05D004088 3.2e-14 81.6 45 77.8
CSS0003035 Camellia sinensis var. sinensis HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
CDE10G0658 Ceratophyllum demersum HOM05D001218 ORTHO05D004088 4.2e-14 81.3 47 76.6
FvH4_5g26380 Fragaria vesca HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
FAN04G0409 Fragaria x ananassa HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
FAN08G1986 Fragaria x ananassa HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
FAN13G0530 Fragaria x ananassa HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
FAN18G2420 Fragaria x ananassa HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
Manes.05G129500 Manihot esculenta HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 80.0
Manes.18G001100 Manihot esculenta HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 80.0
Nn6g31597 Nelumbo nucifera HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
RcHm_v2.0_Chr7g0217221 Rosa chinensis HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
Solyc04g082880.4 Solanum lycopersicum HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
Sopen04g036520 Solanum pennellii HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 77.8
TAR625G0052 Trochodendron aralioides HOM05D001218 ORTHO05D004088 4.2e-14 81.3 45 82.2
Atru.chr13.35 Acer truncatum HOM05D001218 ORTHO05D004088 5.5e-14 80.9 45 77.8
Eucgr.F03611 Eucalyptus grandis HOM05D001218 ORTHO05D004088 5.5e-14 80.9 45 80.0
Nn5g31069 Nelumbo nucifera HOM05D001218 ORTHO05D004088 5.5e-14 80.9 45 77.8
THA.LOC104813730 Tarenaya hassleriana HOM05D001218 ORTHO05D004088 5.5e-14 80.9 45 77.8
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 7.2e-14 80.5 45 77.8
BolC6t40103H Brassica oleracea HOM05D001218 ORTHO05D004088 7.2e-14 80.5 45 77.8
CDE05G0435 Ceratophyllum demersum HOM05D001218 ORTHO05D004088 7.2e-14 80.5 45 77.8
CDE05G0891 Ceratophyllum demersum HOM05D001218 ORTHO05D004088 7.2e-14 80.5 45 77.8
CSS0013185 Camellia sinensis var. sinensis HOM05D001218 ORTHO05D004088 9.4e-14 80.1 45 75.6
DCAR_017621 Daucus carota HOM05D001218 ORTHO05D004088 9.4e-14 80.1 45 77.8
Sed0027532 Sechium edule HOM05D001218 ORTHO05D004088 9.4e-14 80.1 45 77.8
Hund01814 Selenicereus undatus HOM05D001218 ORTHO05D004088 9.4e-14 80.1 45 75.6
Hund01817 Selenicereus undatus HOM05D001218 ORTHO05D004088 9.4e-14 80.1 45 75.6
THA.LOC104812017 Tarenaya hassleriana HOM05D001218 ORTHO05D004088 9.4e-14 80.1 44 79.5
Zm00001eb252630 Zea mays HOM05D001218 ORTHO05D004088 9.4e-14 80.1 48 72.9
AUR62035185 Chenopodium quinoa HOM05D001218 ORTHO05D004088 1.2e-13 79.7 45 77.8
AUR62043319 Chenopodium quinoa HOM05D001218 ORTHO05D004088 1.2e-13 79.7 45 77.8
Migut.N02993 Erythranthe guttata HOM05D001218 ORTHO05D004088 1.2e-13 79.7 45 77.8
Potri.002G003100 Populus trichocarpa HOM05D001218 ORTHO05D004088 1.2e-13 79.7 45 82.2
PGSC0003DMG400010007 Solanum tuberosum HOM05D001218 ORTHO05D004088 1.2e-13 79.7 45 75.6
Zm00001eb188910 Zea mays HOM05D001218 ORTHO05D004088 1.2e-13 79.7 47 74.5
Eucgr.F01823 Eucalyptus grandis HOM05D001218 ORTHO05D004088 1.6e-13 79.3 45 77.8
TWI36G0968 Tripterygium wilfordii HOM05D001218 ORTHO05D004088 1.6e-13 79.3 45 75.6
DCAR_013949 Daucus carota HOM05D001218 ORTHO05D004088 2.1e-13 79.0 45 75.6
PGR031G3703 Punica granatum HOM05D001218 ORTHO05D004088 2.1e-13 79.0 45 77.8
MSTRG.24523 Avicennia marina HOM05D001218 ORTHO05D004088 3.6e-13 78.2 45 73.3
Sed0013544 Sechium edule HOM05D001218 ORTHO05D004088 3.6e-13 78.2 45 75.6
Aqoxy5G00952 Aquilegia oxysepala HOM05D001218 ORTHO05D004088 4.6e-13 77.8 45 75.6
Oeu064732.1 Olea europaea HOM05D001218 ORTHO05D004088 4.6e-13 77.8 45 75.6
TWI12G0956 Tripterygium wilfordii HOM05D001218 ORTHO05D004088 4.6e-13 77.8 45 73.3
MSTRG.1008 Avicennia marina HOM05D001218 ORTHO05D004088 6.1e-13 77.4 45 73.3
Lsat_1_v5_gn_9_48180 Lactuca sativa HOM05D001218 ORTHO05D004088 6.1e-13 77.4 45 75.6
Phvul.003G009600 Phaseolus vulgaris HOM05D001218 ORTHO05D004088 6.1e-13 77.4 45 75.6
vmacro21744 Vaccinium macrocarpon HOM05D001218 ORTHO05D004088 6.1e-13 77.4 44 77.3
ATR0605G031 Amborella trichopoda HOM05D001218 ORTHO05D004088 7.9e-13 77.0 46 71.7
MBI19_g39687_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D022331 7.9e-13 77.0 46 71.7
Zm00001eb381920 Zea mays HOM05D001218 ORTHO05D004088 7.9e-13 77.0 47 72.3
Ciclev10000595m.g Citrus clementina HOM05D001218 ORTHO05D004088 1.0e-12 76.6 45 71.1
MBI18_g13002_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D022331 1.0e-12 76.6 45 71.1
Nn1g08050 Nelumbo nucifera HOM05D001218 ORTHO05D004088 1.0e-12 76.6 48 66.7
Oeu035766.1 Olea europaea HOM05D000150 ORTHO05D000108 1.0e-12 76.6 45 73.3
Glyma.20G007400 Glycine max HOM05D001218 ORTHO05D004088 1.4e-12 76.3 45 73.3
Lalb_Chr10g0095321 Lupinus albus HOM05D001218 ORTHO05D004088 1.4e-12 76.3 45 73.3
Actinidia15552 Actinidia chinensis HOM05D001218 ORTHO05D004088 1.8e-12 75.9 45 73.3
Ca_12496_v3 Cicer arietinum L. HOM05D001218 ORTHO05D004088 2.3e-12 75.5 45 73.3
Os02g0714200 Oryza sativa ssp. japonica HOM05D001218 ORTHO05D004088 2.3e-12 75.5 47 70.2
HanXRQChr16g0512491 Helianthus annuus HOM05D001218 ORTHO05D004088 3.0e-12 75.1 45 71.1
Medtr1g035230 Medicago truncatula HOM05D001218 ORTHO05D004088 3.0e-12 75.1 45 73.3
Psat6g131840 Pisum sativum HOM05D001218 ORTHO05D004088 3.0e-12 75.1 45 73.3
TPR.G18596 Trifolium pratense HOM05D001218 ORTHO05D004088 3.0e-12 75.1 45 73.3
ATR0057G131 Amborella trichopoda HOM05D001218 ORTHO05D004088 3.9e-12 74.7 48 66.7
ECA232G2106 Erigeron canadensis HOM05D001218 ORTHO05D004088 3.9e-12 74.7 45 71.1
Lalb_Chr17g0338171 Lupinus albus HOM05D001218 ORTHO05D004088 5.1e-12 74.3 45 71.1
Os06g0326400 Oryza sativa ssp. japonica HOM05D001218 ORTHO05D004088 6.7e-12 73.9 47 66.0
VMungo1215G2664 Vigna mungo HOM05D001218 ORTHO05D004088 6.7e-12 73.9 44 72.7
Glyma.07G160500 Glycine max HOM05D001218 ORTHO05D004088 8.8e-12 73.6 45 71.1
MBI01_g22962_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 8.8e-12 73.6 45 68.9
HPP92_007461 Vanilla planifolia HOM05D001218 ORTHO05D004088 8.8e-12 73.6 44 75.0
TAR375G0723 Trochodendron aralioides HOM05D001218 ORTHO05D004088 1.1e-11 73.2 47 66.0
arahy.Tifrunner.gnm1.ann1.BFE9YH Arachis hypogaea HOM05D001218 ORTHO05D004088 1.5e-11 72.8 45 68.9
Oeu035767.1 Olea europaea HOM05D001218 ORTHO05D004088 1.5e-11 72.8 45 71.1
MBI04_g22928_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D004088 2.5e-11 72.0 47 66.0
Lalb_Chr04g0258861 Lupinus albus HOM05D001218 ORTHO05D004088 5.7e-11 70.9 45 64.4
Lsat_1_v5_gn_8_26721 Lactuca sativa HOM05D001218 ORTHO05D004088 7.4e-11 70.5 45 64.4
MBI17_g33116_MAGBIO Magnolia biondii HOM05D001218 ORTHO05D011977 7.4e-11 70.5 45 66.7
arahy.Tifrunner.gnm1.ann1.H559FZ Arachis hypogaea HOM05D001218 ORTHO05D004088 9.7e-11 70.1 45 66.7
SMO115G0046 Selaginella moellendorffii HOM05D001218 ORTHO05D004088 9.7e-11 70.1 47 66.0
HanXRQChr14g0427931 Helianthus annuus HOM05D001218 ORTHO05D004088 1.7e-10 69.3 45 62.2
Lj2g0017094 Lotus japonicus HOM05D001218 ORTHO05D004088 2.2e-10 68.9 45 64.4
Lsat_1_v5_gn_2_3161 Lactuca sativa HOM05D001218 ORTHO05D004088 3.7e-10 68.2 45 64.4
ECA233G0383 Erigeron canadensis HOM05D001218 ORTHO05D004088 6.3e-10 67.4 45 64.4
SEGI_18001 Sequoiadendron giganteum HOM05D001218 ORTHO05D004088 6.3e-10 67.4 45 64.4
PSO210G1993 Papaver somniferum HOM05D001218 ORTHO05D004088 2.4e-09 65.5 47 57.4
PSO210G6488 Papaver somniferum HOM05D001218 ORTHO05D004088 3.1e-09 65.1 47 55.3
AUR62013305 Chenopodium quinoa HOM05D001218 ORTHO05D022331 4.1e-09 64.7 45 62.2
HanXRQChr08g0216771 Helianthus annuus HOM05D001218 ORTHO05D004088 4.1e-09 64.7 45 62.2
AagrBONN_evm.TU.Sc2ySwM_228.4948 Anthoceros agrestis HOM05D001218 ORTHO05D004088 5.3e-09 64.3 47 57.4
ECA233G6219 Erigeron canadensis HOM05D001218 ORTHO05D004088 6.9e-09 63.9 45 62.2
Mapoly0105s0043 Marchantia polymorpha HOM05D001218 ORTHO05D004088 1.5e-08 62.8 47 57.4
Pp3c18_9850 Physcomitrium patens HOM05D001218 ORTHO05D003142 2.0e-08 62.4 48 56.2
Pp3c21_16140 Physcomitrium patens HOM05D001218 ORTHO05D004088 1.3e-07 59.7 48 54.2
Zm00001eb043000 Zea mays HOM05D001218 ORTHO05D004088 8.5e-07 57.0 45 51.1
Zm00001eb153820 Zea mays HOM05D001218 ORTHO05D011584 8.5e-07 57.0 45 51.1
Os09g0298100 Oryza sativa ssp. japonica HOM05D001218 ORTHO05D004088 3.2e-06 55.1 45 51.1
SGA_v2.0_scaffold73G24447 Striga asiatica HOM05D001218 ORTHO05D004088 3.2e-06 55.1 45 48.9


User provided reference genes

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