Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 7.0e-193 677.2 355 100.0
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 2.6e-171 605.5 377 86.2
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 1.8e-111 406.8 345 64.6
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 5.1e-111 405.2 341 64.5
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 2.8e-109 399.4 329 65.0
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 8.2e-109 397.9 350 65.1
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.4e-108 397.1 347 63.7
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.8e-108 396.7 356 60.4
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 4.1e-108 395.6 328 64.9
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 5.3e-108 395.2 342 61.7
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 5.9e-107 391.7 346 64.5
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.3e-106 390.6 342 61.4
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.8e-106 389.0 353 62.0
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.4e-105 387.1 326 62.0
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 2.1e-104 383.3 353 61.5
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 2.7e-104 382.9 353 61.5
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 4.6e-104 382.1 347 61.1
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 5.1e-103 378.6 335 60.9
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 5.7e-102 375.2 345 60.9
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 3.7e-101 372.5 360 58.9
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 4.5e-99 365.5 326 61.3
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 6.5e-98 361.7 337 57.3
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 7.2e-97 358.2 341 55.4
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.2e-96 357.5 337 57.0
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 1.6e-96 357.1 322 60.9
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.1e-94 350.9 316 59.8
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.3e-94 349.4 337 55.8
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 9.7e-94 347.8 342 57.9
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 4.8e-93 345.5 348 54.6
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 4.8e-93 345.5 332 56.6
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 7.0e-92 341.7 335 57.0
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 7.0e-92 341.7 338 56.2
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 2.0e-91 340.1 333 56.8
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 4.5e-91 339.0 354 53.4
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 5.9e-91 338.6 341 54.5
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 5.9e-91 338.6 437 46.7
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 7.7e-91 338.2 336 54.8
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.0e-90 337.8 325 58.2
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 1.0e-90 337.8 322 58.1
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 3.8e-90 335.9 350 52.6
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 5.0e-90 335.5 342 52.9
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 5.0e-90 335.5 335 58.2
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 5.0e-90 335.5 347 53.3
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 6.5e-90 335.1 350 53.4
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 6.5e-90 335.1 326 59.5
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.9e-89 333.6 344 56.1
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.9e-89 333.6 345 54.2
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 2.5e-89 333.2 345 53.6
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 4.2e-89 332.4 326 56.4
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 5.5e-89 332.0 329 59.0
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 9.4e-89 331.3 324 57.7
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 9.4e-89 331.3 335 54.0
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 9.4e-89 331.3 356 53.9
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 2.1e-88 330.1 352 54.3
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 2.1e-88 330.1 352 54.3
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 6.1e-88 328.6 347 53.0
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 1.0e-87 327.8 354 52.3
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.4e-87 327.4 338 53.0
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.3e-87 326.6 326 56.1
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 3.0e-87 326.2 338 53.8
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.0e-87 326.2 326 56.4
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 3.9e-87 325.9 337 54.0
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 6.7e-87 325.1 352 53.7
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.1e-86 324.3 326 56.1
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 2.0e-86 323.6 367 51.8
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 9.7e-86 321.2 332 54.2
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.8e-85 319.7 326 55.8
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 4.8e-85 318.9 338 53.0
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.3e-85 318.5 329 54.7
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 5.3e-84 315.5 335 53.1
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 1.2e-83 314.3 358 52.8
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 5.9e-83 312.0 358 51.7
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.7e-82 310.5 343 52.5
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 1.1e-81 307.8 344 53.5
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.1e-81 307.8 344 52.9
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.5e-81 307.4 321 54.8
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 3.2e-81 306.2 323 53.9
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 1.8e-79 300.4 321 53.6
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 8.8e-79 298.1 334 51.8
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.2e-78 297.7 262 62.6
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 2.0e-78 297.0 341 49.0
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 3.4e-78 296.2 269 61.7
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 7.5e-78 295.0 338 48.8
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 7.5e-78 295.0 326 50.9
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 8.3e-77 291.6 376 47.3
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.0e-75 287.0 352 49.7
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 5.0e-74 282.3 322 51.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 1.2e-72 277.7 340 47.6
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 2.6e-70 270.0 342 48.8
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 8.3e-69 265.0 287 51.6
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 7.7e-67 258.5 318 48.7
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 3.3e-65 253.1 396 40.7
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 2.4e-60 236.9 269 52.4
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.1e-56 223.8 431 37.8
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 5.4e-52 209.1 172 64.0
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 1.2e-51 208.0 242 52.5
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 4.1e-44 183.0 227 49.3
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 2.7e-43 180.3 357 35.3
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 3.0e-42 176.8 137 65.7
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 4.3e-41 172.9 365 32.1
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 3.7e-37 159.8 285 37.5
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 2.4e-31 140.6 82 87.8
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 3.4e-30 136.7 139 57.6
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 1.9e-28 131.0 90 72.2
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 1.9e-25 120.9 228 37.7
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 4.0e-23 113.2 71 77.5
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 7.6e-22 109.0 477 24.1
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.3e-21 108.2 111 55.9
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 3.5e-19 100.1 251 32.3
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 2.5e-17 94.0 192 38.0
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 4.3e-17 93.2 70 65.7
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 7.3e-17 92.4 118 50.8
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 1.3e-13 81.6 265 27.5
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 3.8e-13 80.1 177 31.6
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.6e-11 74.7 54 66.7
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 2.1e-11 74.3 56 64.3
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 2.3e-10 70.9 54 55.6
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.9e-09 67.8 56 55.4
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 1.9e-09 67.8 172 30.2
QL03p040408 Quercus lobata HOM05D006361 ORTHO05D007824 1.3e-08 65.1 43 69.8


User provided reference genes

Program Settings