Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G095800 Populus trichocarpa HOM05D006231 ORTHO05D007857 1.6e-175 619.4 334 100.0
Sabra10G0068400 Salix brachista HOM05D006231 ORTHO05D007857 3.2e-147 525.4 383 74.7
Potri.008G146000 Populus trichocarpa HOM05D006231 ORTHO05D007857 6.7e-137 491.1 335 84.5
Manes.01G197500 Manihot esculenta HOM05D006231 ORTHO05D007857 2.3e-113 412.9 331 71.3
Sabra08G0111000 Salix brachista HOM05D006231 ORTHO05D007857 7.0e-94 348.2 216 82.9
Ciclev10032202m.g Citrus clementina HOM05D006231 ORTHO05D007857 1.7e-92 343.6 330 59.1
Cfa009127 Carpinus fangiana HOM05D006231 ORTHO05D007857 4.2e-91 339.0 326 59.2
QL03p062170 Quercus lobata HOM05D006231 ORTHO05D007857 9.4e-91 337.8 331 59.8
THA.LOC104822056 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 3.0e-89 332.8 324 59.0
Haze_12158 Corylus avellana HOM05D006231 ORTHO05D007857 1.5e-88 330.5 237 70.9
TWI36G0577 Tripterygium wilfordii HOM05D006231 ORTHO05D007857 4.4e-88 328.9 242 66.9
CiPaw.05G148900 Carya illinoinensis HOM05D006231 ORTHO05D007857 2.8e-87 326.2 328 59.8
THA.LOC104822957 Tarenaya hassleriana HOM05D006231 ORTHO05D007857 1.1e-86 324.3 248 64.9
Eucgr.B02548 Eucalyptus grandis HOM05D006231 ORTHO05D007857 1.8e-86 323.6 301 59.1
MD16G1088300 Malus domestica HOM05D006231 ORTHO05D007857 1.8e-86 323.6 344 59.0
Atru.chr11.1975 Acer truncatum HOM05D006231 ORTHO05D007857 2.4e-86 323.2 325 59.4
BcaC05g26301 Brassica carinata HOM05D006231 ORTHO05D007857 5.4e-86 322.0 251 62.9
BolC5t31019H Brassica oleracea HOM05D006231 ORTHO05D007857 5.4e-86 322.0 251 62.9
Thhalv10008192m.g Eutrema salsugineum HOM05D006231 ORTHO05D007857 4.5e-85 318.9 247 64.8
Prupe.1G258300 Prunus persica HOM05D006231 ORTHO05D007857 7.7e-85 318.2 254 65.0
Thecc.02G247800 Theobroma cacao HOM05D006231 ORTHO05D007857 1.0e-84 317.8 328 53.7
TAR629G0133 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.0e-84 317.8 245 64.9
COL.COLO4_19536 Corchorus olitorius HOM05D006231 ORTHO05D007857 1.7e-84 317.0 331 54.1
ClCG05G025120 Citrullus lanatus HOM05D006231 ORTHO05D007857 2.3e-84 316.6 237 66.7
Lalb_Chr09g0326451 Lupinus albus HOM05D006231 ORTHO05D007857 2.9e-84 316.2 238 66.8
Gohir.D05G320900 Gossypium hirsutum HOM05D006231 ORTHO05D007857 5.0e-84 315.5 246 65.0
Gorai.009G344200 Gossypium raimondii HOM05D006231 ORTHO05D007857 5.0e-84 315.5 246 65.0
Aa31LG7G7830 Aethionema arabicum HOM05D006231 ORTHO05D007857 1.5e-83 313.9 247 63.2
Nn4g22867 Nelumbo nucifera HOM05D006231 ORTHO05D007857 1.5e-83 313.9 335 56.7
BcaB07g32378 Brassica carinata HOM05D006231 ORTHO05D007857 1.9e-83 313.5 249 62.2
RcHm_v2.0_Chr4g0444351 Rosa chinensis HOM05D006231 ORTHO05D007857 2.5e-83 313.2 265 63.8
Sp1g21370 Schrenkiella parvula HOM05D006231 ORTHO05D007857 3.3e-83 312.8 256 60.9
Hma1.2p1_1017F.1_g248270 Hydrangea macrophylla HOM05D006231 ORTHO05D007857 4.3e-83 312.4 243 65.8
Gohir.D02G165000 Gossypium hirsutum HOM05D006231 ORTHO05D007857 9.5e-83 311.2 310 54.8
Carub.0001s2346 Capsella rubella HOM05D006231 ORTHO05D007857 1.2e-82 310.8 326 53.1
Dinv24894 Davidia involucrata HOM05D006231 ORTHO05D007857 1.2e-82 310.8 292 57.5
AL1G37790 Arabidopsis lyrata HOM05D006231 ORTHO05D007857 1.6e-82 310.5 327 52.6
arahy.Tifrunner.gnm1.ann1.FQS9XH Arachis hypogaea HOM05D006231 ORTHO05D007857 1.6e-82 310.5 239 62.8
arahy.Tifrunner.gnm1.ann1.XK2UET Arachis hypogaea HOM05D006231 ORTHO05D007857 1.6e-82 310.5 239 62.8
AT1G24040 Arabidopsis thaliana HOM05D006231 ORTHO05D007857 2.8e-82 309.7 246 62.2
MELO3C012017.2 Cucumis melo HOM05D006231 ORTHO05D007857 3.6e-82 309.3 240 65.0
Duzib248G0169 Durio zibethinus HOM05D006231 ORTHO05D007857 4.7e-82 308.9 329 52.3
CARHR024340 Cardamine hirsuta HOM05D006231 ORTHO05D007857 6.1e-82 308.5 248 62.9
CsaV3_5G031780 Cucumis sativus L. HOM05D006231 ORTHO05D007857 8.0e-82 308.1 237 65.0
PGR119G0912 Punica granatum HOM05D006231 ORTHO05D007857 8.0e-82 308.1 246 62.2
Sed0009573 Sechium edule HOM05D006231 ORTHO05D007857 1.0e-81 307.8 237 65.4
CAN.G505.18 Capsicum annuum HOM05D006231 ORTHO05D007857 1.4e-81 307.4 242 64.9
Nitab4.5_0004963g0030 Nicotiana tabacum HOM05D006231 ORTHO05D007857 1.4e-81 307.4 242 64.0
C05p23180 Brassica napus HOM05D006231 ORTHO05D007857 2.3e-81 306.6 250 61.2
MD13G1088000 Malus domestica HOM05D006231 ORTHO05D007857 2.3e-81 306.6 253 63.2
PGSC0003DMG400004132 Solanum tuberosum HOM05D006231 ORTHO05D007857 5.2e-81 305.4 249 63.1
Cc11_g14350 Coffea canephora HOM05D006231 ORTHO05D007857 8.9e-81 304.7 288 55.9
Nitab4.5_0001474g0130 Nicotiana tabacum HOM05D006231 ORTHO05D007857 8.9e-81 304.7 242 63.6
Gohir.A05G318600 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.2e-80 304.3 246 63.4
FvH4_4g34910 Fragaria vesca HOM05D006231 ORTHO05D007857 3.4e-80 302.8 351 53.8
Aqoxy3G00933 Aquilegia oxysepala HOM05D006231 ORTHO05D007857 7.5e-80 301.6 248 59.3
CSS0002380 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 1.7e-79 300.4 242 62.0
CSS0044234 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.7e-79 299.3 333 54.1
CANSAT01G1818 Cannabis sativa HOM05D006231 ORTHO05D007857 1.8e-78 297.0 226 65.9
Sopen05g001920 Solanum pennellii HOM05D006231 ORTHO05D007857 2.4e-78 296.6 242 62.8
Lj2g0015887 Lotus japonicus HOM05D006231 ORTHO05D007857 3.2e-78 296.2 232 62.9
FAN12G2615 Fragaria x ananassa HOM05D006231 ORTHO05D007857 9.2e-78 294.7 332 54.5
Lsat_1_v5_gn_8_158260 Lactuca sativa HOM05D006231 ORTHO05D007857 9.2e-78 294.7 247 63.2
Glyma.01G034200 Glycine max HOM05D006231 ORTHO05D007857 7.8e-77 291.6 237 62.4
A09p40810 Brassica napus HOM05D006231 ORTHO05D007857 1.7e-76 290.4 215 63.3
BraA09t39576Z Brassica rapa HOM05D006231 ORTHO05D007857 1.7e-76 290.4 215 63.3
Actinidia15012 Actinidia chinensis HOM05D006231 ORTHO05D007857 2.3e-76 290.0 244 61.5
vmacro16274 Vaccinium macrocarpon HOM05D006231 ORTHO05D007857 3.0e-76 289.7 245 59.6
ECA233G1652 Erigeron canadensis HOM05D006231 ORTHO05D007857 5.0e-76 288.9 241 61.4
Psat2g109920 Pisum sativum HOM05D006231 ORTHO05D007857 8.6e-76 288.1 237 61.2
Oeu046714.1 Olea europaea HOM05D006231 ORTHO05D007857 1.1e-75 287.7 238 62.2
MSTRG.613 Avicennia marina HOM05D006231 ORTHO05D007857 4.3e-75 285.8 233 63.1
Sc11g0001330 Simmondsia chinensis HOM05D006231 ORTHO05D007857 7.3e-75 285.0 246 60.2
FAN22G0458 Fragaria x ananassa HOM05D006231 ORTHO05D007857 1.2e-74 284.3 268 58.2
Peaxi162Scf00421g00419 Petunia axillaris HOM05D006231 ORTHO05D007857 1.2e-74 284.3 228 63.2
Ca_04621_v3 Cicer arietinum L. HOM05D006231 ORTHO05D007857 2.1e-74 283.5 231 64.1
Hund25325 Selenicereus undatus HOM05D006231 ORTHO05D007857 2.1e-74 283.5 233 61.8
HanXRQChr08g0208971 Helianthus annuus HOM05D006231 ORTHO05D007857 1.0e-73 281.2 239 60.7
FAN17G2958 Fragaria x ananassa HOM05D006231 ORTHO05D007857 2.3e-73 280.0 259 58.3
PSO478G5064 Papaver somniferum HOM05D006231 ORTHO05D007857 2.3e-73 280.0 332 50.3
FAN07G0090 Fragaria x ananassa HOM05D006231 ORTHO05D007857 4.0e-73 279.3 259 57.5
EL10Ac6g13629 Beta vulgaris HOM05D006231 ORTHO05D007857 5.2e-73 278.9 248 61.3
PSO017G5161 Papaver somniferum HOM05D006231 ORTHO05D007857 5.2e-73 278.9 332 49.7
AUR62005324 Chenopodium quinoa HOM05D006231 ORTHO05D007857 7.5e-72 275.0 337 49.6
Ah.03g132450 Amaranthus hybridus HOM05D006231 ORTHO05D007857 2.2e-71 273.5 241 58.1
Lj3A1049T58 Lonicera japonica HOM05D006231 ORTHO05D007857 1.4e-70 270.8 266 55.6
AUR62013974 Chenopodium quinoa HOM05D006231 ORTHO05D007857 1.9e-70 270.4 341 48.7
CSS0037524 Camellia sinensis var. sinensis HOM05D006231 ORTHO05D007857 3.2e-70 269.6 238 55.0
Glyma.02G032100 Glycine max HOM05D006231 ORTHO05D007857 7.0e-70 268.5 240 59.2
TPR.G4354 Trifolium pratense HOM05D006231 ORTHO05D007857 9.2e-70 268.1 234 58.5
Medtr5g035060 Medicago truncatula HOM05D006231 ORTHO05D007857 1.6e-69 267.3 239 58.6
SalBow2G0481 Salvia bowleyana HOM05D006231 ORTHO05D007857 2.7e-69 266.5 238 55.9
DCAR_024529 Daucus carota HOM05D006231 ORTHO05D007857 3.0e-68 263.1 198 64.6
Migut.L01438 Erythranthe guttata HOM05D006231 ORTHO05D007857 3.0e-68 263.1 234 58.1
Phvul.002G073400 Phaseolus vulgaris HOM05D006231 ORTHO05D007857 3.0e-68 263.1 245 55.1
unitig_22.g6476 Utricularia gibba HOM05D006231 ORTHO05D007857 7.3e-67 258.5 223 59.2
VMungo1215G3085 Vigna mungo HOM05D006231 ORTHO05D007857 9.5e-67 258.1 258 52.7
Rhsim12G0123300 Rhododendron simsii HOM05D000030 ORTHO05D000009 8.1e-66 255.0 279 50.5
MBI15_g12952_MAGBIO Magnolia biondii HOM05D006231 ORTHO05D007857 1.1e-65 254.6 224 58.9
CDE10G0954 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 2.9e-63 246.5 229 55.5
Gorai.005G184900 Gossypium raimondii HOM05D006231 ORTHO05D007857 3.2e-62 243.0 310 47.4
GSVIVG01020181001 Vitis vinifera HOM05D006231 ORTHO05D007857 2.5e-59 233.4 153 75.8
CDE10G0637 Ceratophyllum demersum HOM05D006231 ORTHO05D007857 4.7e-58 229.2 199 59.8
SGA_v2.0_scaffold166G38349 Striga asiatica HOM05D006231 ORTHO05D007857 8.9e-57 224.9 270 48.1
ATR1149G099 Amborella trichopoda HOM05D006231 ORTHO05D007857 4.1e-54 216.1 191 58.6
HPP92_010904 Vanilla planifolia HOM05D006231 ORTHO05D007857 6.6e-52 208.8 217 51.6
Medtr5g035040 Medicago truncatula HOM05D006231 ORTHO05D007857 1.2e-50 204.5 232 50.0
SEGI_07841 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.6e-50 203.0 213 49.3
Solyc05g005890.2 Solanum lycopersicum HOM05D006231 ORTHO05D007857 1.8e-49 200.7 155 66.5
Os04g0465500 Oryza sativa ssp. japonica HOM05D006231 ORTHO05D007857 9.9e-48 194.9 230 48.7
Zm00001eb424460 Zea mays HOM05D006231 ORTHO05D007857 1.7e-47 194.1 243 46.9
Gohir.A03G141850 Gossypium hirsutum HOM05D006231 ORTHO05D007857 1.0e-44 184.9 221 48.4
Pp3c2_6130 Physcomitrium patens HOM05D006231 ORTHO05D007857 2.4e-41 173.7 213 44.1
Pp3c2_6132 Physcomitrium patens HOM05D006231 ORTHO05D007857 2.4e-41 173.7 213 44.1
SEGI_36756 Sequoiadendron giganteum HOM05D006231 ORTHO05D007857 3.1e-41 173.3 220 42.7
Mapoly0005s0071 Marchantia polymorpha HOM05D006231 ORTHO05D007857 3.4e-40 169.9 223 43.9
Zm00001eb348680 Zea mays HOM05D006231 ORTHO05D007857 4.9e-39 166.0 243 43.6
Psat2g109880 Pisum sativum HOM05D006231 ORTHO05D007857 7.1e-38 162.2 153 52.3
SMO365G0079 Selaginella moellendorffii HOM05D006231 ORTHO05D007857 1.2e-32 144.8 191 42.9
CBR_g40430 Chara braunii HOM05D017800 ORTHO05D019665 1.3e-28 131.3 214 36.4
Medtr5g035050 Medicago truncatula HOM05D006231 ORTHO05D007857 1.9e-27 127.5 85 76.5
AagrBONN_evm.TU.Sc2ySwM_368.2752 Anthoceros agrestis HOM05D006231 ORTHO05D007857 1.2e-24 118.2 191 38.2
Dinv31098 Davidia involucrata HOM05D006231 ORTHO05D007857 7.1e-22 109.0 98 58.2
TAR622G0489 Trochodendron aralioides HOM05D006231 ORTHO05D007857 1.6e-13 81.3 83 54.2
Cre10.g464750 Chlamydomonas reinhardtii HOM05D006231 ORTHO05D007857 1.0e-07 62.0 215 22.8
PRCOL_00005055 Prasinoderma coloniale HOM05D006231 ORTHO05D007857 3.2e-06 57.0 157 26.8


User provided reference genes

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