Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 0.0e+00 1508.8 811 100.0
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 2.3e-308 1062.0 820 71.2
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 1.6e-272 943.0 819 65.6
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 4.4e-110 403.3 827 38.3
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 8.4e-109 399.1 1138 33.1
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 6.2e-104 382.9 896 36.8
CiPaw.01G194000 Carya illinoinensis HOM05D008144 ORTHO05D010081 1.7e-101 374.8 874 36.5
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 5.8e-86 323.2 823 34.5
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 2.2e-85 321.2 833 34.6
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 1.6e-83 315.1 839 36.6
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 3.5e-83 313.9 957 32.4
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 1.3e-82 312.0 856 34.7
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 1.0e-74 285.8 833 33.6
TAR362G0851 Trochodendron aralioides HOM05D008144 ORTHO05D010081 2.2e-72 278.1 903 29.3
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 5.0e-69 266.9 821 32.5
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 1.4e-63 248.8 809 31.0
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 1.5e-62 245.4 860 31.2
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 3.3e-57 227.6 582 34.9
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.7e-56 224.2 823 31.2
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.7e-56 224.2 823 31.2
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 8.2e-56 223.0 793 30.1
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 1.2e-54 219.2 759 32.1
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 5.9e-54 216.9 828 30.3
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.7e-53 215.3 830 29.6
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 8.5e-53 213.0 815 30.9
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 1.4e-47 195.7 1290 24.8
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 1.5e-41 175.6 977 26.6
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 5.7e-41 173.7 839 28.7
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 9.8e-41 172.9 866 29.2
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 5.9e-38 163.7 280 44.3
Sabra10G0062200 Salix brachista HOM05D008144 ORTHO05D010081 1.3e-37 162.5 156 60.9
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 3.3e-36 157.9 826 27.5
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 4.7e-35 154.1 179 54.7
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 3.2e-31 141.4 838 27.7
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 3.2e-31 141.4 238 42.9
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 1.6e-30 139.0 550 29.6
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 1.7e-29 135.6 254 38.2
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 1.6e-27 129.0 188 44.1
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 2.3e-26 125.2 520 28.7
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 4.0e-26 124.4 872 26.5
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 6.8e-26 123.6 538 28.3
TAR633G0610 Trochodendron aralioides HOM05D008144 ORTHO05D010081 2.6e-25 121.7 254 36.2
Dinv33607 Davidia involucrata HOM05D008144 ORTHO05D010081 4.4e-25 120.9 131 54.2
Nn1g02499 Nelumbo nucifera HOM05D008144 ORTHO05D010081 7.5e-25 120.2 496 27.4
Eucgr.H03407 Eucalyptus grandis HOM05D008144 ORTHO05D010081 1.3e-24 119.4 507 29.4
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 1.0e-21 109.8 817 25.7
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 2.3e-21 108.6 249 36.5
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 8.1e-19 100.1 176 40.3
Aqoxy2G03478 Aquilegia oxysepala HOM05D008144 ORTHO05D031257 1.8e-18 99.0 849 24.3
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 3.1e-18 98.2 449 28.5
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 4.0e-18 97.8 812 25.5
Nitab4.5_0002118g0020 Nicotiana tabacum HOM05D014400 ORTHO05D010081 5.2e-18 97.4 168 40.5
PGSC0003DMG400006073 Solanum tuberosum HOM05D014400 ORTHO05D010081 5.2e-18 97.4 827 24.8
Dinv14057 Davidia involucrata HOM05D008144 ORTHO05D010081 5.8e-17 94.0 246 35.0
DCAR_002363 Daucus carota HOM05D008144 ORTHO05D010081 7.5e-17 93.6 540 24.1
Sopen09g031740 Solanum pennellii HOM05D014400 ORTHO05D010081 1.7e-16 92.4 815 24.5
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 4.9e-16 90.9 540 25.9
Solyc09g082900.3 Solanum lycopersicum HOM05D014400 ORTHO05D010081 4.9e-16 90.9 820 24.4
Oeu009118.1 Olea europaea HOM05D008144 ORTHO05D010081 1.0e-13 83.2 479 26.7
SalBow3G2772 Salvia bowleyana HOM05D014400 ORTHO05D010081 1.1e-12 79.7 159 35.8
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.5e-12 79.3 796 24.7
PGR004G2389 Punica granatum HOM05D008144 ORTHO05D010081 1.5e-12 79.3 862 24.2
vmacro08386 Vaccinium macrocarpon HOM05D008144 ORTHO05D010081 2.1e-11 75.5 349 28.7
Migut.N00217 Erythranthe guttata HOM05D014400 ORTHO05D010081 6.2e-11 73.9 202 33.7
MBI11_g00116_MAGBIO Magnolia biondii HOM05D008144 ORTHO05D010081 6.2e-11 73.9 239 28.9
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 6.8e-10 70.5 164 32.9
Rhsim04G0196200 Rhododendron simsii HOM05D008144 ORTHO05D010081 5.8e-09 67.4 171 35.7
AL7G41440 Arabidopsis lyrata HOM05D011210 ORTHO05D013204 2.9e-08 65.1 180 35.6
SGA_v2.0_scaffold308G48120 Striga asiatica HOM05D014400 ORTHO05D010081 8.4e-08 63.5 228 30.7
MD16G1201900 Malus domestica HOM05D008144 ORTHO05D010081 1.4e-07 62.8 66 57.6
Actinidia14081 Actinidia chinensis HOM05D008144 ORTHO05D010081 1.9e-07 62.4 91 45.1


User provided reference genes

Program Settings