Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G067200 Populus trichocarpa HOM05D005475 ORTHO05D006575 6.4e-51 203.8 100 100.0
Potri.008G170700 Populus trichocarpa HOM05D005475 ORTHO05D006575 8.6e-40 166.8 101 83.2
Sabra08G0130500 Salix brachista HOM05D005475 ORTHO05D006575 4.4e-36 154.5 100 80.0
Sabra10G0040200 Salix brachista HOM05D005475 ORTHO05D006575 5.1e-32 141.0 81 85.2
MD16G1224800 Malus domestica HOM05D005475 ORTHO05D006575 1.3e-27 126.3 92 70.7
Phvul.007G271300 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 1.7e-27 125.9 100 65.0
MD13G1219400 Malus domestica HOM05D005475 ORTHO05D006575 2.9e-27 125.2 97 69.1
COL.COLO4_15946 Corchorus olitorius HOM05D005475 ORTHO05D006575 3.8e-27 124.8 94 67.0
TWI73G1305 Tripterygium wilfordii HOM05D005475 ORTHO05D006575 2.4e-26 122.1 94 68.1
Prupe.1G046100 Prunus persica HOM05D005475 ORTHO05D006575 7.1e-26 120.6 100 64.0
GSVIVG01027899001 Vitis vinifera HOM05D005475 ORTHO05D006575 1.2e-25 119.8 94 67.0
Atru.chr4.1933 Acer truncatum HOM05D005475 ORTHO05D006575 2.1e-25 119.0 102 63.7
Glyma.10G136600 Glycine max HOM05D005475 ORTHO05D006575 1.3e-24 116.3 99 61.6
CANSAT78G0624 Cannabis sativa HOM05D005475 ORTHO05D006575 3.9e-24 114.8 100 63.0
Lalb_Chr19g0128471 Lupinus albus HOM05D005475 ORTHO05D006575 5.1e-24 114.4 103 57.3
Sed0012950 Sechium edule HOM05D005475 ORTHO05D006575 5.1e-24 114.4 96 64.6
Psat6g107160 Pisum sativum HOM05D005475 ORTHO05D006575 8.7e-24 113.6 101 60.4
Duzib212G0290 Durio zibethinus HOM05D005475 ORTHO05D006575 1.1e-23 113.2 94 63.8
Cfa014769 Carpinus fangiana HOM05D005475 ORTHO05D006575 1.5e-23 112.8 94 61.7
Thecc.04G261900 Theobroma cacao HOM05D005475 ORTHO05D006575 1.5e-23 112.8 94 61.7
Dinv27096 Davidia involucrata HOM05D005475 ORTHO05D006575 1.9e-23 112.5 95 63.2
CiPaw.02G108100 Carya illinoinensis HOM05D005475 ORTHO05D006575 4.3e-23 111.3 94 61.7
THA.LOC104816000 Tarenaya hassleriana HOM05D005475 ORTHO05D006575 4.3e-23 111.3 95 58.9
Ca_11926_v3 Cicer arietinum L. HOM05D005475 ORTHO05D006575 5.6e-23 110.9 96 61.5
Gorai.005G053100 Gossypium raimondii HOM05D005475 ORTHO05D006575 9.6e-23 110.2 95 62.1
CiPaw.01G179400 Carya illinoinensis HOM05D005475 ORTHO05D006575 1.3e-22 109.8 94 59.6
Gohir.A02G042200 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.3e-22 109.8 95 61.1
Gohir.D02G047800 Gossypium hirsutum HOM05D005475 ORTHO05D006575 1.3e-22 109.8 95 61.1
CARHR127400 Cardamine hirsuta HOM05D005475 ORTHO05D006575 1.6e-22 109.4 100 52.0
Ciclev10006301m.g Citrus clementina HOM05D005475 ORTHO05D006575 2.1e-22 109.0 94 60.6
Sed0016324 Sechium edule HOM05D005475 ORTHO05D006575 3.6e-22 108.2 96 60.4
Carub.0004s1502 Capsella rubella HOM05D005475 ORTHO05D006575 6.2e-22 107.5 94 55.3
AL4G29060 Arabidopsis lyrata HOM05D005475 ORTHO05D006575 8.1e-22 107.1 94 55.3
TAR362G0816 Trochodendron aralioides HOM05D005475 ORTHO05D006575 8.1e-22 107.1 94 60.6
BcaB02g10558 Brassica carinata HOM05D005475 ORTHO05D006575 1.1e-21 106.7 95 54.7
QL06p020702 Quercus lobata HOM05D005475 ORTHO05D006575 1.1e-21 106.7 92 60.9
Aa31LG1G20410 Aethionema arabicum HOM05D005475 ORTHO05D006575 1.8e-21 105.9 94 55.3
CSS0013344 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 2.4e-21 105.5 107 57.0
Aa31LG5G3900 Aethionema arabicum HOM05D005475 ORTHO05D006575 5.3e-21 104.4 94 56.4
Solyc09g090540.3 Solanum lycopersicum HOM05D005475 ORTHO05D006575 5.3e-21 104.4 102 56.9
Thhalv10017471m.g Eutrema salsugineum HOM05D005475 ORTHO05D006575 6.9e-21 104.0 94 54.3
RcHm_v2.0_Chr4g0394791 Rosa chinensis HOM05D005475 ORTHO05D006575 6.9e-21 104.0 59 81.4
Sp4g15710 Schrenkiella parvula HOM05D005475 ORTHO05D006575 9.0e-21 103.6 94 54.3
Eucgr.H02964 Eucalyptus grandis HOM05D005475 ORTHO05D006575 1.2e-20 103.2 96 53.1
Hma1.2p1_0385F.1_g141450 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 1.2e-20 103.2 100 59.0
AT2G33390 Arabidopsis thaliana HOM05D005475 ORTHO05D006575 2.6e-20 102.1 94 54.3
ClCG05G004080 Citrullus lanatus HOM05D005475 ORTHO05D006575 3.4e-20 101.7 96 58.3
A05p12130 Brassica napus HOM05D005475 ORTHO05D006575 4.5e-20 101.3 98 50.0
Gohir.D10G159400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 5.8e-20 100.9 98 57.1
Gorai.011G179000 Gossypium raimondii HOM05D005475 ORTHO05D006575 5.8e-20 100.9 98 57.1
C04p15700 Brassica napus HOM05D005475 ORTHO05D006575 1.3e-19 99.8 98 49.0
BolC4t23138H Brassica oleracea HOM05D005475 ORTHO05D006575 1.3e-19 99.8 98 49.0
Glyma.10G189800 Glycine max HOM05D005475 ORTHO05D006575 1.3e-19 99.8 106 53.8
FAN17G2060 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.7e-19 99.4 93 59.1
BraA05t20157Z Brassica rapa HOM05D005475 ORTHO05D006575 2.2e-19 99.0 99 50.5
Glyma.20G201100 Glycine max HOM05D005475 ORTHO05D006575 2.2e-19 99.0 109 53.2
Gohir.A10G108400 Gossypium hirsutum HOM05D005475 ORTHO05D006575 2.2e-19 99.0 98 56.1
CAN.G220.90 Capsicum annuum HOM05D005475 ORTHO05D006575 3.8e-19 98.2 101 52.5
BcaC02g11426 Brassica carinata HOM05D005475 ORTHO05D006575 4.9e-19 97.8 97 47.4
Medtr1g045370 Medicago truncatula HOM05D005475 ORTHO05D006575 4.9e-19 97.8 104 53.8
Actinidia11364 Actinidia chinensis HOM05D005475 ORTHO05D006575 6.4e-19 97.4 102 52.0
Hma1.2p1_0112F.1_g054570 Hydrangea macrophylla HOM05D005475 ORTHO05D006575 8.4e-19 97.1 101 56.4
Nitab4.5_0002709g0070 Nicotiana tabacum HOM05D005475 ORTHO05D006575 1.4e-18 96.3 95 54.7
Phvul.L002444 Phaseolus vulgaris HOM05D005475 ORTHO05D006575 1.4e-18 96.3 111 52.3
Manes.03G160400 Manihot esculenta HOM05D005475 ORTHO05D006575 1.9e-18 95.9 100 57.0
Nn3g19747 Nelumbo nucifera HOM05D005475 ORTHO05D006575 2.4e-18 95.5 100 53.0
Manes.15G044300 Manihot esculenta HOM05D005475 ORTHO05D006575 3.2e-18 95.1 80 66.2
VMungo0720G1758 Vigna mungo HOM05D005475 ORTHO05D006575 3.2e-18 95.1 111 51.4
Lj6g0010293 Lotus japonicus HOM05D005475 ORTHO05D006575 7.1e-18 94.0 100 55.0
MBI07_g18714_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 7.1e-18 94.0 76 60.5
Medtr1g073660 Medicago truncatula HOM05D005475 ORTHO05D006575 7.1e-18 94.0 105 53.3
Nitab4.5_0001051g0090 Nicotiana tabacum HOM05D005475 ORTHO05D006575 2.1e-17 92.4 95 52.6
Peaxi162Scf00033g02837 Petunia axillaris HOM05D005475 ORTHO05D006575 3.5e-17 91.7 84 54.8
Rhsim02G0042800 Rhododendron simsii HOM05D005475 ORTHO05D006575 3.5e-17 91.7 101 50.5
SalBow3G2868 Salvia bowleyana HOM05D005475 ORTHO05D006575 3.5e-17 91.7 93 50.5
Hund03078 Selenicereus undatus HOM05D005475 ORTHO05D006575 6.0e-17 90.9 95 50.5
vmacro08540 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 6.0e-17 90.9 105 52.4
Cc03_g06010 Coffea canephora HOM05D005475 ORTHO05D006575 1.0e-16 90.1 72 58.3
Sopen09g033470 Solanum pennellii HOM05D005475 ORTHO05D006575 1.0e-16 90.1 102 52.0
Lalb_Chr03g0037011 Lupinus albus HOM05D005475 ORTHO05D006575 1.3e-16 89.7 125 43.2
PGR031G0084 Punica granatum HOM05D005475 ORTHO05D006575 1.3e-16 89.7 90 55.6
PGSC0003DMG400017155 Solanum tuberosum HOM05D005475 ORTHO05D006575 1.8e-16 89.4 102 52.0
MELO3C006388.2 Cucumis melo HOM05D000730 ORTHO05D000578 2.3e-16 89.0 121 44.6
Aqoxy2G03723 Aquilegia oxysepala HOM05D005475 ORTHO05D006575 3.0e-16 88.6 97 46.4
PSO674G0109 Papaver somniferum HOM05D005475 ORTHO05D006575 5.1e-16 87.8 60 70.0
PSO832G2786 Papaver somniferum HOM05D005475 ORTHO05D006575 5.1e-16 87.8 60 70.0
Migut.N00292 Erythranthe guttata HOM05D005475 ORTHO05D006575 6.7e-16 87.4 97 48.5
BcaC02g07831 Brassica carinata HOM05D005475 ORTHO05D006575 1.1e-15 86.7 54 72.2
C04p62850 Brassica napus HOM05D005475 ORTHO05D006575 1.1e-15 86.7 54 72.2
BolC4t27768H Brassica oleracea HOM05D005475 ORTHO05D006575 1.1e-15 86.7 54 72.2
Duzib151G0481 Durio zibethinus HOM05D005475 ORTHO05D006575 1.1e-15 86.7 74 60.8
BcaB06g28682 Brassica carinata HOM05D005475 ORTHO05D006575 1.9e-15 85.9 54 70.4
Lj5g0027748 Lotus japonicus HOM05D005475 ORTHO05D006575 1.9e-15 85.9 106 50.0
MBI10_g38466_MAGBIO Magnolia biondii HOM05D005475 ORTHO05D006575 1.9e-15 85.9 97 53.6
Psat6g117200 Pisum sativum HOM05D005475 ORTHO05D006575 2.5e-15 85.5 104 51.9
Actinidia20831 Actinidia chinensis HOM05D005475 ORTHO05D006575 3.3e-15 85.1 88 47.7
BraA03t11131Z Brassica rapa HOM05D005475 ORTHO05D006575 4.3e-15 84.7 94 47.9
Lalb_Chr06g0169471 Lupinus albus HOM05D005475 ORTHO05D006575 4.3e-15 84.7 85 56.5
A03p18710 Brassica napus HOM05D005475 ORTHO05D006575 5.6e-15 84.3 94 47.9
CDE08G0603 Ceratophyllum demersum HOM05D005475 ORTHO05D006575 5.6e-15 84.3 100 47.0
vmacro15470 Vaccinium macrocarpon HOM05D005475 ORTHO05D006575 5.6e-15 84.3 105 48.6
Actinidia39922 Actinidia chinensis HOM05D005475 ORTHO05D006575 7.4e-15 84.0 102 47.1
C03p21860 Brassica napus HOM05D005475 ORTHO05D006575 7.4e-15 84.0 94 45.7
BolC3t14568H Brassica oleracea HOM05D005475 ORTHO05D006575 7.4e-15 84.0 94 45.7
Glyma.20G086200 Glycine max HOM05D005475 ORTHO05D006575 7.4e-15 84.0 79 57.0
FAN12G1687 Fragaria x ananassa HOM05D005475 ORTHO05D006575 9.6e-15 83.6 66 66.7
A04p25690 Brassica napus HOM05D005475 ORTHO05D006575 1.6e-14 82.8 54 66.7
BraA04t18073Z Brassica rapa HOM05D005475 ORTHO05D006575 1.6e-14 82.8 54 66.7
ECA248G3571 Erigeron canadensis HOM05D000730 ORTHO05D000578 1.6e-14 82.8 76 55.3
Lsat_1_v5_gn_1_75221 Lactuca sativa HOM05D005475 ORTHO05D006575 1.6e-14 82.8 73 56.2
CsaV3_3G011800 Cucumis sativus L. HOM05D005475 ORTHO05D006575 2.1e-14 82.4 81 55.6
BcaC01g05844 Brassica carinata HOM05D005475 ORTHO05D006575 2.8e-14 82.0 93 44.1
TPR.G27310 Trifolium pratense HOM05D005475 ORTHO05D006575 3.7e-14 81.6 77 54.5
TPR.G28846 Trifolium pratense HOM05D005475 ORTHO05D006575 6.2e-14 80.9 106 48.1
BcaC07g37337 Brassica carinata HOM05D005475 ORTHO05D006575 9.0e-13 77.0 58 63.8
C08p07780 Brassica napus HOM05D005475 ORTHO05D006575 9.0e-13 77.0 58 63.8
BolC8t47626H Brassica oleracea HOM05D005475 ORTHO05D006575 9.0e-13 77.0 58 63.8
CSS0022443 Camellia sinensis var. sinensis HOM05D005475 ORTHO05D006575 2.0e-12 75.9 84 52.4
AUR62002181 Chenopodium quinoa HOM05D005475 ORTHO05D006575 2.6e-12 75.5 97 51.5
AUR62015529 Chenopodium quinoa HOM05D005475 ORTHO05D006575 2.6e-12 75.5 97 51.5
Lalb_Chr02g0150621 Lupinus albus HOM05D005475 ORTHO05D006575 2.9e-11 72.0 54 68.5
RcHm_v2.0_Chr4g0394821 Rosa chinensis HOM05D005475 ORTHO05D006575 3.8e-11 71.6 39 82.1
TAR365G0748 Trochodendron aralioides HOM05D005475 ORTHO05D006575 4.9e-11 71.2 80 53.8
FvH4_4g04340 Fragaria vesca HOM05D005475 ORTHO05D006575 6.5e-11 70.9 74 56.8
Rhsim04G0173600 Rhododendron simsii HOM05D005475 ORTHO05D006575 8.4e-11 70.5 130 36.9
FAN22G1457 Fragaria x ananassa HOM05D005475 ORTHO05D006575 1.9e-10 69.3 73 56.2
HanXRQChr01g0022901 Helianthus annuus HOM05D005475 ORTHO05D006575 1.9e-10 69.3 46 69.6
FAN22G0728 Fragaria x ananassa HOM05D005475 ORTHO05D006575 2.5e-10 68.9 59 61.0
unitig_26.g9548 Utricularia gibba HOM05D005475 ORTHO05D006575 7.1e-10 67.4 46 67.4
Ah.04g155370 Amaranthus hybridus HOM05D005475 ORTHO05D006575 2.7e-09 65.5 91 51.6
Sed0016405 Sechium edule HOM05D005475 ORTHO05D006575 3.5e-09 65.1 70 51.4
Sc13g0006140 Simmondsia chinensis HOM05D005475 ORTHO05D006575 1.0e-08 63.5 73 43.8
unitig_749.g13516 Utricularia gibba HOM05D005475 ORTHO05D006575 5.1e-08 61.2 97 43.3
Os03g0138400 Oryza sativa ssp. japonica HOM05D005475 ORTHO05D006575 1.1e-07 60.1 64 48.4
EL10Ac3g04956 Beta vulgaris HOM05D005475 ORTHO05D006575 7.4e-07 57.4 80 47.5
DCAR_027337 Daucus carota HOM05D005475 ORTHO05D006575 1.3e-06 56.6 73 38.4
HPP92_007739 Vanilla planifolia HOM05D005475 ORTHO05D006575 1.6e-06 56.2 39 64.1
Nn1g02914 Nelumbo nucifera HOM05D005475 ORTHO05D006575 4.8e-06 54.7 74 47.3
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 4.8e-06 54.7 97 37.1
Migut.G00489 Erythranthe guttata HOM05D005475 ORTHO05D006575 8.2e-06 53.9 55 54.5


User provided reference genes

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