Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 3.5e-288 994.2 486 100.0
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 3.9e-279 964.1 486 96.9
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.3e-277 959.1 487 96.3
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 6.5e-274 946.8 487 95.1
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 1.4e-273 945.7 487 94.3
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 9.3e-273 943.0 487 94.3
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.2e-272 942.6 487 93.0
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 3.5e-272 941.0 487 94.3
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.0e-271 939.5 487 94.0
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.3e-271 939.1 486 94.4
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.8e-271 938.7 487 93.8
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 3.0e-271 937.9 487 93.6
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 3.0e-271 937.9 487 93.8
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 1.1e-270 936.0 487 94.3
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.9e-270 935.3 487 93.4
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.9e-270 935.3 487 93.6
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.5e-270 934.9 487 93.4
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 3.3e-270 934.5 485 93.6
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 5.7e-270 933.7 487 92.6
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 3.7e-269 931.0 487 92.2
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 8.2e-269 929.9 486 93.0
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 2.4e-268 928.3 484 92.6
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 1.5e-267 925.6 486 93.2
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 4.5e-267 924.1 487 92.6
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 4.5e-267 924.1 483 92.3
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 1.0e-266 922.9 487 91.8
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 1.0e-266 922.9 484 91.7
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 1.3e-266 922.5 484 91.7
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 1.7e-266 922.2 487 92.4
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 2.9e-266 921.4 487 91.8
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 2.9e-266 921.4 484 91.9
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 3.8e-266 921.0 492 92.1
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 8.5e-266 919.8 487 91.4
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 1.4e-265 919.1 484 91.3
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 1.4e-265 919.1 487 91.4
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 1.9e-265 918.7 486 92.6
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 2.5e-265 918.3 487 91.4
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 3.2e-265 917.9 484 92.4
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 4.2e-265 917.5 484 91.9
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 7.2e-265 916.8 486 92.0
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 7.2e-265 916.8 487 91.4
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 7.2e-265 916.8 486 92.2
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 2.7e-264 914.8 485 90.9
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 4.6e-264 914.1 487 90.8
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 4.6e-264 914.1 484 90.9
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 6.1e-264 913.7 486 90.7
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 7.9e-264 913.3 487 90.3
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 7.9e-264 913.3 487 90.6
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 7.9e-264 913.3 487 91.4
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 1.4e-263 912.5 484 91.1
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 1.4e-263 912.5 486 91.2
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 2.3e-263 911.8 487 90.6
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 2.3e-263 911.8 485 90.9
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 2.3e-263 911.8 486 90.7
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 3.0e-263 911.4 486 90.5
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 3.0e-263 911.4 486 90.5
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 3.9e-263 911.0 487 90.3
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 3.9e-263 911.0 485 91.1
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 5.1e-263 910.6 485 90.3
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 5.1e-263 910.6 484 90.9
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.7e-263 910.2 486 90.7
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 6.7e-263 910.2 487 90.3
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 8.8e-263 909.8 487 90.1
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 8.8e-263 909.8 486 90.5
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 8.8e-263 909.8 486 90.5
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 8.8e-263 909.8 486 90.7
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 1.1e-262 909.4 487 90.3
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 1.5e-262 909.1 488 90.0
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 2.0e-262 908.7 487 90.3
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 2.0e-262 908.7 479 91.2
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 2.0e-262 908.7 485 90.7
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 2.0e-262 908.7 487 90.6
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 2.5e-262 908.3 484 90.3
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 3.3e-262 907.9 486 90.3
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 3.3e-262 907.9 487 91.0
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 4.3e-262 907.5 487 90.3
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 4.3e-262 907.5 487 89.9
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 5.7e-262 907.1 487 89.9
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 7.4e-262 906.7 484 90.9
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 7.4e-262 906.7 486 90.1
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 9.7e-262 906.4 487 89.7
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 9.7e-262 906.4 492 89.4
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 1.3e-261 906.0 480 90.6
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 2.2e-261 905.2 486 91.2
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 2.2e-261 905.2 487 90.1
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 2.2e-261 905.2 485 90.1
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 2.2e-261 905.2 486 89.3
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 6.3e-261 903.7 489 90.0
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 8.2e-261 903.3 482 90.7
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 8.2e-261 903.3 470 93.4
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.8e-260 902.1 487 89.9
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 5.3e-260 900.6 483 90.1
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 5.3e-260 900.6 484 90.9
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 6.9e-260 900.2 486 89.5
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 9.1e-260 899.8 478 91.2
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 1.5e-259 899.0 486 89.3
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 2.0e-259 898.7 484 89.9
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 4.5e-259 897.5 488 89.5
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 5.9e-259 897.1 483 89.4
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 2.2e-258 895.2 452 95.6
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 3.8e-258 894.4 485 89.5
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 3.8e-258 894.4 480 89.6
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 5.0e-258 894.0 487 89.9
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 3.2e-257 891.3 479 90.6
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 7.2e-257 890.2 460 93.7
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 1.2e-256 889.4 486 88.5
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 3.3e-254 881.3 459 91.9
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 8.0e-248 860.1 484 87.2
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.0e-247 859.8 481 87.1
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.4e-247 859.4 445 92.6
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 2.3e-247 858.6 457 90.4
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 1.8e-244 849.0 442 88.9
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 2.0e-243 845.5 482 84.0
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 1.9e-241 839.0 439 90.4
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 9.4e-241 836.6 408 97.1
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 6.1e-240 833.9 407 96.8
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 1.0e-239 833.2 434 89.4
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 5.2e-239 830.9 431 88.6
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 6.3e-237 823.9 406 95.3
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.8e-236 822.4 405 95.3
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 9.1e-236 820.1 407 94.3
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 5.9e-227 790.8 433 84.8
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 5.0e-226 787.7 486 80.0
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 5.6e-225 784.3 384 97.1
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 8.3e-221 770.4 421 83.4
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 5.9e-219 764.2 459 80.6
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 2.3e-218 762.3 427 81.7
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 2.6e-214 748.8 392 91.6
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.1e-208 729.2 393 90.6
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 1.4e-207 726.5 477 77.4
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 3.6e-192 675.2 368 88.6
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.2e-190 670.2 346 91.9
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 1.8e-183 646.4 395 73.9
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.1e-180 637.1 486 68.5
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 5.4e-180 634.8 315 95.2
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.6e-171 606.7 487 66.3
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.1e-171 606.3 486 66.3
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.1e-168 594.3 486 65.2
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 6.9e-167 591.3 331 87.6
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.2e-148 528.9 279 89.2
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 8.5e-141 504.6 351 72.4
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.3e-125 454.1 276 75.0
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.3e-114 416.8 203 95.6
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.2e-97 361.3 222 79.7
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 1.2e-97 361.3 180 91.7
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 6.0e-94 349.0 172 97.1
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.5e-92 344.4 171 95.9
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.2e-86 324.7 485 43.3
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 1.1e-76 291.6 146 93.8
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 6.6e-69 265.8 146 86.3
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 1.5e-68 264.6 164 81.7
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 6.4e-64 249.2 127 93.7
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 3.2e-63 246.9 127 88.2
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.8e-61 241.1 147 84.4
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 4.2e-55 219.9 259 44.8
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 1.6e-51 208.0 100 95.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 9.0e-50 202.2 102 92.2
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.8e-48 196.8 127 79.5
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 4.3e-44 183.3 108 84.3
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 2.8e-35 154.1 77 96.1
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 2.8e-35 154.1 77 96.1
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 6.3e-35 152.9 102 75.5
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 3.0e-29 134.0 69 95.7
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 3.9e-29 133.7 197 38.6
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.8e-29 132.5 71 90.1
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.7e-27 127.1 68 88.2
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.3e-27 126.3 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 6.3e-27 126.3 65 92.3
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-25 121.7 66 87.9
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.4e-25 120.6 66 86.4
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 6.1e-22 109.8 83 66.3
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.4e-21 108.6 67 70.1
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 5.2e-21 106.7 67 73.1
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 4.5e-17 93.6 48 89.6
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 3.8e-16 90.5 168 36.3
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 2.0e-12 78.2 71 56.3
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 5.7e-12 76.6 72 55.6
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 1.3e-11 75.5 72 55.6
Nitab4.5_0027010g0010 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.1e-10 72.4 61 77.0
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 7.7e-09 66.2 61 57.4
Nitab4.5_0002184g0100 Nicotiana tabacum HOM05D003867 ORTHO05D004593 1.3e-08 65.5 61 63.9
Duzib052G0593 Durio zibethinus HOM05D000222 ORTHO05D001350 2.1e-06 58.2 40 67.5


User provided reference genes

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