Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 1.4e-128 463.0 238 100.0
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 4.6e-116 421.4 228 94.3
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 3.7e-97 358.6 236 82.6
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 5.9e-95 351.3 240 77.9
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 1.1e-93 347.1 237 76.8
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 3.0e-91 339.0 238 74.4
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 5.2e-91 338.2 234 79.5
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 2.6e-90 335.9 238 77.3
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 4.4e-90 335.1 236 77.1
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 2.2e-89 332.8 236 76.7
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 8.2e-89 330.9 239 73.6
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 2.4e-88 329.3 236 75.8
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 4.1e-88 328.6 238 73.5
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 7.0e-88 327.8 236 75.8
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 1.6e-87 326.6 229 75.1
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 2.6e-87 325.9 240 74.6
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 2.2e-86 322.8 236 75.4
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 3.8e-86 322.0 234 71.8
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 5.0e-86 321.6 241 71.0
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 8.5e-86 320.9 237 73.0
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 1.1e-85 320.5 240 73.3
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.1e-85 320.5 240 73.3
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 1.5e-85 320.1 239 71.1
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.9e-85 319.7 238 73.1
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 2.5e-85 319.3 234 70.9
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 2.5e-85 319.3 234 70.9
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.5e-85 319.3 238 73.1
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 4.2e-85 318.5 234 70.9
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 4.2e-85 318.5 234 70.9
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 5.5e-85 318.2 232 72.8
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 5.5e-85 318.2 240 72.5
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 9.4e-85 317.4 234 71.4
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 9.4e-85 317.4 234 71.4
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 1.2e-84 317.0 239 70.7
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.2e-84 317.0 239 70.7
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 1.2e-84 317.0 239 70.3
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 1.2e-84 317.0 238 72.7
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 2.1e-84 316.2 236 71.6
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.7e-84 315.8 234 72.6
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 3.6e-84 315.5 238 73.5
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 6.1e-84 314.7 243 70.0
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 1.0e-83 313.9 237 70.5
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 1.8e-83 313.2 227 73.6
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 1.8e-83 313.2 234 73.1
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.8e-83 313.2 236 71.2
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 2.3e-83 312.8 238 70.2
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 6.7e-83 311.2 235 70.6
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 8.8e-83 310.8 242 71.5
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.5e-82 310.1 241 71.0
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 3.3e-82 308.9 234 67.9
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 3.3e-82 308.9 183 85.8
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 3.3e-82 308.9 236 69.9
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 9.7e-82 307.4 229 69.0
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 9.7e-82 307.4 240 71.2
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 1.7e-81 306.6 235 69.4
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 2.8e-81 305.8 232 72.0
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 4.8e-81 305.1 234 67.1
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 4.1e-80 302.0 263 62.7
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 4.1e-80 302.0 236 66.5
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 7.0e-80 301.2 228 69.7
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 1.2e-79 300.4 238 68.9
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 2.0e-79 299.7 228 71.9
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 2.7e-79 299.3 238 70.6
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 1.7e-78 296.6 206 77.2
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 2.9e-78 295.8 236 64.8
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 3.8e-78 295.4 234 66.2
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 8.5e-78 294.3 234 70.1
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 8.5e-78 294.3 241 66.4
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 2.5e-77 292.7 241 66.0
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 4.2e-77 292.0 237 68.4
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 4.2e-77 292.0 236 68.2
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 1.2e-76 290.4 237 66.7
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 2.1e-76 289.7 237 65.4
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 2.1e-76 289.7 239 65.3
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 5.2e-75 285.0 236 67.4
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 1.5e-74 283.5 238 64.3
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 9.8e-74 280.8 231 66.7
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.3e-73 280.4 224 65.6
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 2.8e-73 279.3 201 69.2
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.1e-72 277.3 243 63.0
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 1.7e-70 270.0 236 64.4
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 2.3e-70 269.6 248 64.1
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.9e-70 269.2 242 62.8
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 9.5e-69 264.2 173 76.9
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.8e-65 252.7 237 59.1
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 1.8e-64 250.0 238 59.7
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 1.8e-64 250.0 235 59.1
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 2.0e-63 246.5 170 75.3
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 7.8e-63 244.6 229 59.8
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 1.5e-61 240.4 140 85.7
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 5.6e-61 238.4 225 59.6
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 9.5e-61 237.7 187 65.8
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 1.2e-60 237.3 141 85.1
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 8.9e-59 231.1 236 58.5
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 8.9e-59 231.1 160 75.6
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 7.5e-58 228.0 216 59.3
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 7.8e-55 218.0 140 80.0
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 2.9e-49 199.5 122 82.8
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 1.4e-48 197.2 233 51.9
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 4.3e-45 185.7 144 71.5
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 8.1e-44 181.4 95 87.4
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 8.9e-43 177.9 229 49.8
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 9.9e-42 174.5 250 41.2
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 2.2e-41 173.3 192 49.0
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 1.4e-40 170.6 182 48.9
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 2.4e-40 169.9 139 70.5
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 1.5e-37 160.6 185 43.8
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 1.2e-36 157.5 139 62.6
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 3.4e-34 149.4 149 47.7
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 4.3e-29 132.5 237 41.4
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 1.1e-27 127.9 158 42.4
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 8.1e-20 101.7 100 62.0
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 1.2e-18 97.8 57 84.2
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 9.3e-16 88.2 97 57.7
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 4.0e-11 72.8 138 26.1
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 5.3e-11 72.4 201 26.4


User provided reference genes

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