Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G047500 Populus trichocarpa HOM05D006816 ORTHO05D008666 1.4e-236 822.8 468 100.0
Sabra10G0021100 Salix brachista HOM05D006816 ORTHO05D008666 9.5e-206 720.3 465 85.2
Thecc.02G261900 Theobroma cacao HOM05D006816 ORTHO05D008666 8.5e-130 468.0 482 59.5
TAR622G0126 Trochodendron aralioides HOM05D006816 ORTHO05D008666 9.1e-124 448.0 469 56.9
Atru.chr11.2152 Acer truncatum HOM05D006816 ORTHO05D008666 1.2e-123 447.6 445 60.0
Ciclev10030964m.g Citrus clementina HOM05D006816 ORTHO05D008666 2.6e-123 446.4 427 60.9
TWI36G0164 Tripterygium wilfordii HOM05D006816 ORTHO05D008666 3.5e-123 446.0 487 58.1
GSVIVG01000542001 Vitis vinifera HOM05D006816 ORTHO05D008666 2.9e-122 443.0 428 60.7
Gohir.D02G158100 Gossypium hirsutum HOM05D006816 ORTHO05D008666 3.2e-121 439.5 407 60.7
Gorai.005G177300 Gossypium raimondii HOM05D006816 ORTHO05D008666 3.2e-121 439.5 407 60.7
COL.COLO4_23463 Corchorus olitorius HOM05D006816 ORTHO05D008666 4.2e-121 439.1 478 57.1
Lj3C1059T10 Lonicera japonica HOM05D006816 ORTHO05D008666 4.7e-120 435.6 369 65.0
Gohir.A03G133700 Gossypium hirsutum HOM05D006816 ORTHO05D008666 2.3e-119 433.3 374 63.9
Manes.13G022900 Manihot esculenta HOM05D006816 ORTHO05D008666 5.2e-119 432.2 465 57.8
Dinv15216 Davidia involucrata HOM05D006816 ORTHO05D008666 2.6e-118 429.9 467 56.3
FvH4_4g25720 Fragaria vesca HOM05D006816 ORTHO05D008666 1.7e-117 427.2 461 58.4
CSS0008455 Camellia sinensis var. sinensis HOM05D006816 ORTHO05D008666 6.3e-117 425.2 369 62.9
Nn4g22582 Nelumbo nucifera HOM05D006816 ORTHO05D008666 1.8e-116 423.7 373 64.3
FAN17G1412 Fragaria x ananassa HOM05D006816 ORTHO05D008666 1.7e-114 417.2 374 65.8
QL03p057598 Quercus lobata HOM05D006816 ORTHO05D008666 2.2e-114 416.8 475 55.4
FAN22G0176 Fragaria x ananassa HOM05D006816 ORTHO05D008666 4.2e-113 412.5 476 55.9
Cpa.g.sc33.36 Carica papaya HOM05D006816 ORTHO05D008666 5.5e-113 412.1 369 63.7
FAN12G1622 Fragaria x ananassa HOM05D006816 ORTHO05D008666 7.2e-113 411.8 374 64.7
PGR119G0117 Punica granatum HOM05D006816 ORTHO05D008666 7.2e-113 411.8 369 64.0
Haze_12261 Corylus avellana HOM05D006816 ORTHO05D008666 9.4e-113 411.4 549 51.2
CANSAT01G2021 Cannabis sativa HOM05D006816 ORTHO05D008666 1.0e-111 407.9 457 55.1
Actinidia01356 Actinidia chinensis HOM05D006816 ORTHO05D008666 1.8e-111 407.1 486 54.3
RcHm_v2.0_Chr4g0433151 Rosa chinensis HOM05D006816 ORTHO05D008666 4.0e-111 406.0 461 56.2
Eucgr.H02486 Eucalyptus grandis HOM05D006816 ORTHO05D008666 1.5e-110 404.1 390 59.5
AUR62024254 Chenopodium quinoa HOM05D006816 ORTHO05D008666 5.7e-110 402.1 366 60.9
Duzib251G0886 Durio zibethinus HOM05D006816 ORTHO05D008666 6.3e-109 398.7 366 63.4
Lalb_Chr07g0185401 Lupinus albus HOM05D006816 ORTHO05D008666 5.4e-108 395.6 372 59.9
FAN07G2231 Fragaria x ananassa HOM05D006816 ORTHO05D008666 7.0e-108 395.2 480 55.2
HanXRQChr17g0569531 Helianthus annuus HOM05D006816 ORTHO05D008666 7.0e-108 395.2 366 61.5
CARHR060480 Cardamine hirsuta HOM05D006816 ORTHO05D008666 1.2e-107 394.4 371 60.6
CiPaw.05G180700 Carya illinoinensis HOM05D006816 ORTHO05D008666 1.2e-107 394.4 420 56.9
MD13G1099700 Malus domestica HOM05D006816 ORTHO05D008666 4.5e-107 392.5 452 56.0
BcaB03g15378 Brassica carinata HOM05D006816 ORTHO05D008666 7.7e-107 391.7 377 61.0
THA.LOC104825556 Tarenaya hassleriana HOM05D006816 ORTHO05D008666 7.7e-107 391.7 365 61.9
EL10Ac6g13857 Beta vulgaris HOM05D006816 ORTHO05D008666 1.0e-106 391.3 367 60.5
Prupe.1G246300 Prunus persica HOM05D006816 ORTHO05D008666 2.9e-106 389.8 460 54.1
C06p38240 Brassica napus HOM05D006816 ORTHO05D008666 1.1e-105 387.9 372 60.5
Carub.0002s1430 Capsella rubella HOM05D006816 ORTHO05D008666 1.1e-105 387.9 373 59.2
Aqoxy5G03738 Aquilegia oxysepala HOM05D006816 ORTHO05D008666 1.5e-105 387.5 369 59.9
Hund06034 Selenicereus undatus HOM05D006816 ORTHO05D008666 1.5e-105 387.5 366 60.4
Aa31sc755G30 Aethionema arabicum HOM05D006816 ORTHO05D008666 1.9e-105 387.1 463 54.2
Migut.K00611 Erythranthe guttata HOM05D006816 ORTHO05D008666 1.9e-105 387.1 374 60.7
Lsat_1_v5_gn_4_4020 Lactuca sativa HOM05D006816 ORTHO05D008666 2.5e-105 386.7 371 59.8
Medtr8g089810 Medicago truncatula HOM05D006816 ORTHO05D008666 7.2e-105 385.2 374 58.6
PSO063G6228 Papaver somniferum HOM05D006816 ORTHO05D008666 9.4e-105 384.8 373 60.6
AL2G26590 Arabidopsis lyrata HOM05D006816 ORTHO05D008666 1.6e-104 384.0 372 59.4
BcaC08g46032 Brassica carinata HOM05D006816 ORTHO05D008666 2.7e-104 383.3 374 59.9
BolC6t38923H Brassica oleracea HOM05D006816 ORTHO05D008666 2.7e-104 383.3 374 59.4
PSO754G0080 Papaver somniferum HOM05D006816 ORTHO05D008666 2.7e-104 383.3 373 60.3
arahy.Tifrunner.gnm1.ann1.2HFS1Z Arachis hypogaea HOM05D006816 ORTHO05D008666 3.6e-104 382.9 447 53.9
BraA07t30858Z Brassica rapa HOM05D006816 ORTHO05D008666 3.6e-104 382.9 375 59.7
arahy.Tifrunner.gnm1.ann1.CH9KSW Arachis hypogaea HOM05D006816 ORTHO05D008666 4.7e-104 382.5 373 59.8
Sp5g22850 Schrenkiella parvula HOM05D006816 ORTHO05D008666 8.0e-104 381.7 468 51.7
DCAR_031163 Daucus carota HOM05D006816 ORTHO05D008666 1.0e-103 381.3 361 59.6
Thhalv10018280m.g Eutrema salsugineum HOM05D006816 ORTHO05D008666 1.4e-103 380.9 482 53.3
AT1G67840 Arabidopsis thaliana HOM05D006816 ORTHO05D008666 2.3e-103 380.2 467 51.8
CsaV3_5G031010 Cucumis sativus L. HOM05D006816 ORTHO05D008666 3.0e-103 379.8 464 51.7
Glyma.05G174600 Glycine max HOM05D006816 ORTHO05D008666 3.0e-103 379.8 372 59.1
ECA234G3219 Erigeron canadensis HOM05D006816 ORTHO05D008666 4.0e-103 379.4 369 58.8
A07p32350 Brassica napus HOM05D006816 ORTHO05D008666 6.8e-103 378.6 375 59.2
VMungo0251G0196 Vigna mungo HOM05D006816 ORTHO05D008666 2.6e-102 376.7 373 59.5
Ca_17778_v3 Cicer arietinum L. HOM05D006816 ORTHO05D008666 3.4e-102 376.3 376 58.5
ClCG05G025840 Citrullus lanatus HOM05D006816 ORTHO05D008666 3.4e-102 376.3 431 53.4
Phvul.002G259600 Phaseolus vulgaris HOM05D006816 ORTHO05D008666 3.7e-101 372.9 373 58.4
Ah.02g130220 Amaranthus hybridus HOM05D006816 ORTHO05D008666 1.4e-100 370.9 367 59.1
TPR.G6183 Trifolium pratense HOM05D006816 ORTHO05D008666 1.8e-100 370.5 371 58.0
Lj4g0008868 Lotus japonicus HOM05D006816 ORTHO05D008666 4.1e-100 369.4 373 57.6
Nitab4.5_0000524g0100 Nicotiana tabacum HOM05D006816 ORTHO05D008666 4.1e-100 369.4 365 59.2
Sed0004203 Sechium edule HOM05D006816 ORTHO05D008666 1.2e-99 367.9 430 50.5
MELO3C011940.2 Cucumis melo HOM05D006816 ORTHO05D008666 2.0e-99 367.1 485 50.5
Nitab4.5_0006963g0030 Nicotiana tabacum HOM05D006816 ORTHO05D008666 3.8e-98 362.8 433 52.4
vmacro01121 Vaccinium macrocarpon HOM05D006816 ORTHO05D008666 4.7e-96 355.9 374 57.0
Oeu057544.1 Olea europaea HOM05D006816 ORTHO05D008666 4.0e-95 352.8 473 49.5
PGSC0003DMG400018598 Solanum tuberosum HOM05D006816 ORTHO05D008666 2.6e-94 350.1 467 50.5
Sopen05g008580 Solanum pennellii HOM05D006816 ORTHO05D008666 3.4e-94 349.7 466 49.4
Solyc05g013670.3 Solanum lycopersicum HOM05D006816 ORTHO05D008666 5.7e-94 349.0 466 49.6
Psat7g059360 Pisum sativum HOM05D006816 ORTHO05D008666 1.3e-93 347.8 375 55.7
Cc11_g15850 Coffea canephora HOM05D006816 ORTHO05D008666 2.4e-92 343.6 367 56.1
SalBow2G0630 Salvia bowleyana HOM05D006816 ORTHO05D008666 4.1e-92 342.8 380 54.7
unitig_699.g19932 Utricularia gibba HOM05D006816 ORTHO05D008666 1.5e-89 334.3 368 52.7
AUR62005487 Chenopodium quinoa HOM05D006816 ORTHO05D008666 6.1e-88 328.9 444 47.7
Os12g0292900 Oryza sativa ssp. japonica HOM05D006816 ORTHO05D008666 1.4e-87 327.8 374 51.3
Peaxi162Scf00128g00318 Petunia axillaris HOM05D006816 ORTHO05D008666 3.1e-87 326.6 441 49.4
Zm00001eb319330 Zea mays HOM05D006816 ORTHO05D008666 5.4e-84 315.8 371 49.9
ATR0824G245 Amborella trichopoda HOM05D006816 ORTHO05D008666 2.7e-83 313.5 378 49.2
Sc11g0000930 Simmondsia chinensis HOM05D006816 ORTHO05D008666 3.6e-80 303.1 300 60.0
CAN.G436.5 Capsicum annuum HOM05D006816 ORTHO05D008666 6.2e-72 275.8 299 54.2
SGA_v2.0_scaffold100G29566 Striga asiatica HOM05D006816 ORTHO05D008666 4.9e-69 266.2 339 49.3
SEGI_18687 Sequoiadendron giganteum HOM05D006816 ORTHO05D008666 2.2e-61 240.7 367 42.2
CDE02G3152 Ceratophyllum demersum HOM05D006816 ORTHO05D008666 1.3e-58 231.5 374 42.0
MBI17_g43191_MAGBIO Magnolia biondii HOM05D006816 ORTHO05D008666 9.0e-55 218.8 221 57.9
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 3.4e-38 163.7 137 61.3
Mapoly0088s0066 Marchantia polymorpha HOM05D006816 ORTHO05D008666 1.1e-36 158.7 392 32.4
Psat3g153200 Pisum sativum HOM05D006816 ORTHO05D008666 7.1e-36 156.0 139 59.0
HPP92_023364 Vanilla planifolia HOM05D006816 ORTHO05D008666 4.8e-32 143.3 152 52.6
COL.COLO4_35805 Corchorus olitorius HOM05D006816 ORTHO05D008666 8.2e-32 142.5 99 69.7
Psat4g077560 Pisum sativum HOM05D006816 ORTHO05D008666 1.7e-29 134.8 98 69.4
Psat2g121560 Pisum sativum HOM05D006816 ORTHO05D008666 8.4e-29 132.5 120 58.3
Pp3c11_24610 Physcomitrium patens HOM05D006816 ORTHO05D008666 3.5e-27 127.1 349 29.8
HPP92_023363 Vanilla planifolia HOM05D006816 ORTHO05D008666 1.3e-26 125.2 125 51.2
CBR_g52389 Chara braunii HOM05D006816 ORTHO05D008666 5.7e-25 119.8 295 28.5
Actinidia08129 Actinidia chinensis HOM05D006816 ORTHO05D008666 3.4e-14 84.0 73 58.9
FvH4_4g35670 Fragaria vesca HOM05D006816 ORTHO05D008666 4.2e-12 77.0 89 50.6
FAN22G1065 Fragaria x ananassa HOM05D000247 ORTHO05D000288 9.4e-12 75.9 131 42.0
Glyma.08G131775 Glycine max HOM05D006816 ORTHO05D008666 2.6e-09 67.8 82 51.2
Atru.chr11.2547 Acer truncatum HOM05D006816 ORTHO05D008666 1.7e-08 65.1 64 56.2
Atru.chr11.2546 Acer truncatum HOM05D006816 ORTHO05D008666 1.2e-06 58.9 72 48.6


User provided reference genes

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