Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G024600 Populus trichocarpa HOM05D006719 ORTHO05D007063 3.7e-47 191.8 149 100.0
Potri.008G207500 Populus trichocarpa HOM05D006719 ORTHO05D007063 4.9e-31 138.3 145 80.7
Sabra10G0014400 Salix brachista HOM05D006719 ORTHO05D007063 4.7e-26 121.7 178 50.6
Manes.03G194500 Manihot esculenta HOM05D006719 ORTHO05D007063 6.9e-25 117.9 149 77.2
Ciclev10006148m.g Citrus clementina HOM05D006719 ORTHO05D007063 8.4e-23 110.9 152 67.1
Manes.15G012900 Manihot esculenta HOM05D006719 ORTHO05D007063 7.1e-22 107.8 151 74.2
Atru.chr4.2828 Acer truncatum HOM05D006719 ORTHO05D007063 2.7e-21 105.9 150 72.0
Cfa015380 Carpinus fangiana HOM05D006719 ORTHO05D007063 4.6e-21 105.1 150 50.7
Thecc.04G284000 Theobroma cacao HOM05D006719 ORTHO05D007063 1.7e-20 103.2 149 69.8
Duzib151G0940 Durio zibethinus HOM05D006719 ORTHO05D007063 3.0e-20 102.4 149 64.4
VMungo1309G0351 Vigna mungo HOM05D006719 ORTHO05D007063 3.0e-20 102.4 135 71.1
COL.COLO4_13881 Corchorus olitorius HOM05D006719 ORTHO05D007063 6.6e-20 101.3 149 69.8
Gohir.A10G163700 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.1e-19 100.5 140 72.9
CSS0008404 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.5e-19 100.1 149 66.4
CSS0019267 Camellia sinensis var. sinensis HOM05D006719 ORTHO05D007063 1.5e-19 100.1 149 66.4
MD13G1169300 Malus domestica HOM05D006719 ORTHO05D007063 2.5e-19 99.4 136 72.1
Gorai.011G189600 Gossypium raimondii HOM05D006719 ORTHO05D007063 5.6e-19 98.2 133 72.9
Duzib212G0625 Durio zibethinus HOM05D006719 ORTHO05D007063 7.3e-19 97.8 149 65.8
Prupe.1G137900 Prunus persica HOM05D006719 ORTHO05D007063 7.3e-19 97.8 151 70.2
Gohir.D10G170100 Gossypium hirsutum HOM05D006719 ORTHO05D007063 9.6e-19 97.4 133 72.9
Gorai.006G263400 Gossypium raimondii HOM05D006719 ORTHO05D007063 3.6e-18 95.5 146 63.0
Hma1.2p1_2670F.1_g326650 Hydrangea macrophylla HOM05D006719 ORTHO05D007063 1.8e-17 93.2 144 70.8
GSVIVG01017752001 Vitis vinifera HOM05D006719 ORTHO05D007063 9.0e-17 90.9 154 68.8
MD16G1170500 Malus domestica HOM05D006719 ORTHO05D007063 1.2e-16 90.5 130 74.6
Duzib052G0445 Durio zibethinus HOM05D006719 ORTHO05D007063 1.5e-16 90.1 149 67.1
DCAR_030531 Daucus carota HOM05D006719 ORTHO05D007063 2.6e-16 89.4 134 63.4
HanXRQChr08g0227651 Helianthus annuus HOM05D006719 ORTHO05D007063 3.4e-16 89.0 130 73.8
PSO170G6252 Papaver somniferum HOM05D006719 ORTHO05D007063 5.8e-16 88.2 140 67.1
CiPaw.01G149100 Carya illinoinensis HOM05D006719 ORTHO05D007063 7.6e-16 87.8 153 45.8
Dinv44385 Davidia involucrata HOM05D006719 ORTHO05D007063 7.6e-16 87.8 152 67.1
ECA233G1326 Erigeron canadensis HOM05D006719 ORTHO05D007063 7.6e-16 87.8 116 79.3
Gohir.D09G240400 Gossypium hirsutum HOM05D006719 ORTHO05D007063 9.9e-16 87.4 116 75.0
vmacro08144 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 9.9e-16 87.4 143 65.0
vmacro22972 Vaccinium macrocarpon HOM05D006719 ORTHO05D007063 9.9e-16 87.4 143 65.0
Cpa.g.sc16.165 Carica papaya HOM05D006719 ORTHO05D007063 1.7e-15 86.7 147 66.0
Gohir.A09G239500 Gossypium hirsutum HOM05D006719 ORTHO05D007063 1.7e-15 86.7 116 72.4
Actinidia40259 Actinidia chinensis HOM05D006719 ORTHO05D007063 6.4e-15 84.7 149 67.1
CiPaw.02G083300 Carya illinoinensis HOM05D006719 ORTHO05D007063 6.4e-15 84.7 132 72.0
Peaxi162Scf00024g00041 Petunia axillaris HOM05D006719 ORTHO05D007063 3.2e-14 82.4 134 69.4
Phvul.009G247500 Phaseolus vulgaris HOM05D006719 ORTHO05D007063 3.2e-14 82.4 148 66.9
Nn4g25876 Nelumbo nucifera HOM05D006719 ORTHO05D007063 5.4e-14 81.6 145 61.4
Dinv29768 Davidia involucrata HOM05D001303 ORTHO05D001129 1.2e-13 80.5 130 68.5
PSO210G7501 Papaver somniferum HOM05D006719 ORTHO05D007063 1.6e-13 80.1 140 65.0
Peaxi162Scf00534g00017 Petunia axillaris HOM05D006719 ORTHO05D007063 2.7e-13 79.3 148 41.2
QL06p008791 Quercus lobata HOM05D006719 ORTHO05D007063 3.5e-13 79.0 136 72.8
THA.LOC104821772 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 3.5e-13 79.0 136 58.8
Lj6g0006694 Lotus japonicus HOM05D006719 ORTHO05D007063 4.6e-13 78.6 151 66.9
TWI09G1121 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 6.0e-13 78.2 150 63.3
Carub.0007s2587 Capsella rubella HOM05D006719 ORTHO05D007063 1.0e-12 77.4 148 60.8
Nn3g21430 Nelumbo nucifera HOM05D006719 ORTHO05D007063 1.0e-12 77.4 145 66.2
TAR362G0876 Trochodendron aralioides HOM05D006719 ORTHO05D007063 1.8e-12 76.6 128 71.1
TWI53G1176 Tripterygium wilfordii HOM05D006719 ORTHO05D007063 2.3e-12 76.3 150 62.7
Oeu037752.1 Olea europaea HOM05D006719 ORTHO05D007063 3.9e-12 75.5 147 65.3
RcHm_v2.0_Chr4g0422101 Rosa chinensis HOM05D006719 ORTHO05D007063 6.7e-12 74.7 131 69.5
Psat1g153440 Pisum sativum HOM05D006719 ORTHO05D007063 8.7e-12 74.3 150 66.0
Sopen01g028510 Solanum pennellii HOM05D006719 ORTHO05D007063 1.9e-11 73.2 150 64.0
Aa31LG10G6320 Aethionema arabicum HOM05D006719 ORTHO05D007063 5.6e-11 71.6 123 68.3
Peaxi162Scf00024g00231 Petunia axillaris HOM05D006719 ORTHO05D007063 5.6e-11 71.6 122 69.7
THA.LOC104820261 Tarenaya hassleriana HOM05D006719 ORTHO05D007063 5.6e-11 71.6 142 64.1
Solyc01g066900.4 Solanum lycopersicum HOM05D006719 ORTHO05D007063 9.6e-11 70.9 150 60.7
FAN17G0015 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.6e-10 70.1 161 39.1
BraA08t33189Z Brassica rapa HOM05D006719 ORTHO05D007063 2.1e-10 69.7 120 61.7
MSTRG.21797 Avicennia marina HOM05D006719 ORTHO05D007063 4.8e-10 68.6 145 53.8
Ca_01942_v3 Cicer arietinum L. HOM05D006719 ORTHO05D007063 4.8e-10 68.6 129 68.2
FAN12G0931 Fragaria x ananassa HOM05D006719 ORTHO05D007063 8.1e-10 67.8 154 61.0
Migut.G00270 Erythranthe guttata HOM05D006719 ORTHO05D007063 1.8e-09 66.6 106 67.9
FAN07G2874 Fragaria x ananassa HOM05D006719 ORTHO05D007063 1.8e-09 66.6 154 37.7
Sed0003703 Sechium edule HOM05D006719 ORTHO05D007063 1.8e-09 66.6 148 62.8
SGA_v2.0_scaffold147G36286 Striga asiatica HOM05D006719 ORTHO05D007063 1.8e-09 66.6 111 57.7
Aqoxy2G03000 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 2.4e-09 66.2 144 63.9
FAN12G0915 Fragaria x ananassa HOM05D006719 ORTHO05D007063 2.4e-09 66.2 122 67.2
Thhalv10026485m.g Eutrema salsugineum HOM05D006719 ORTHO05D007063 3.1e-09 65.9 144 57.6
Glyma.15G147300 Glycine max HOM05D006719 ORTHO05D007063 3.1e-09 65.9 151 62.3
Lalb_Chr15g0083521 Lupinus albus HOM05D006719 ORTHO05D007063 3.1e-09 65.9 150 63.3
Zm00001eb137600 Zea mays HOM05D006719 ORTHO05D007063 4.0e-09 65.5 116 51.7
BcaC07g37932 Brassica carinata HOM05D006719 ORTHO05D007063 5.3e-09 65.1 121 36.4
TAR365G1095 Trochodendron aralioides HOM05D006719 ORTHO05D007063 5.3e-09 65.1 141 63.8
BolC8t48317H Brassica oleracea HOM05D006719 ORTHO05D007063 6.9e-09 64.7 120 36.7
ClCG05G006040 Citrullus lanatus HOM05D006719 ORTHO05D007063 6.9e-09 64.7 141 61.7
A08p11980 Brassica napus HOM05D006719 ORTHO05D007063 1.5e-08 63.5 57 59.6
CsaV3_3G014580 Cucumis sativus L. HOM05D006719 ORTHO05D007063 1.5e-08 63.5 141 62.4
FvH4_4g17930 Fragaria vesca HOM05D006719 ORTHO05D007063 1.5e-08 63.5 154 59.7
CANSAT78G1100 Cannabis sativa HOM05D006719 ORTHO05D007063 3.4e-08 62.4 55 63.6
Sp7g14160 Schrenkiella parvula HOM05D006719 ORTHO05D007063 3.4e-08 62.4 146 56.2
MBI19_g20884_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 4.5e-08 62.0 162 54.9
Actinidia01465 Actinidia chinensis HOM05D006719 ORTHO05D007063 5.8e-08 61.6 66 60.6
MELO3C006659.2 Cucumis melo HOM05D006719 ORTHO05D007063 5.8e-08 61.6 141 61.7
SalBow2G1281 Salvia bowleyana HOM05D006719 ORTHO05D007063 5.8e-08 61.6 43 69.8
Sed0000550 Sechium edule HOM05D006719 ORTHO05D007063 9.9e-08 60.8 138 64.5
Lsat_1_v5_gn_6_15060 Lactuca sativa HOM05D006719 ORTHO05D007063 1.7e-07 60.1 106 73.6
MBI18_g14088_MAGBIO Magnolia biondii HOM05D000713 ORTHO05D000547 2.2e-07 59.7 142 38.0
AL7G39510 Arabidopsis lyrata HOM05D006719 ORTHO05D007063 2.9e-07 59.3 146 58.2
AT4G15790 Arabidopsis thaliana HOM05D006719 ORTHO05D007063 3.8e-07 58.9 51 60.8
Glyma.09G045300 Glycine max HOM05D006719 ORTHO05D007063 3.8e-07 58.9 151 59.6
HPP92_017216 Vanilla planifolia HOM05D006719 ORTHO05D007063 3.8e-07 58.9 108 45.4
CARHR290290 Cardamine hirsuta HOM05D006719 ORTHO05D007063 6.4e-07 58.2 130 61.5
PGSC0003DMG400011322 Solanum tuberosum HOM05D006719 ORTHO05D007063 6.4e-07 58.2 148 60.8
unitig_37.g12394 Utricularia gibba HOM05D006719 ORTHO05D007063 6.4e-07 58.2 114 65.8
MBI19_g42338_MAGBIO Magnolia biondii HOM05D006719 ORTHO05D007063 8.4e-07 57.8 156 46.2
Medtr2g436860 Medicago truncatula HOM05D006719 ORTHO05D007063 8.4e-07 57.8 48 64.6
Sc19g0005170 Simmondsia chinensis HOM05D006719 ORTHO05D007063 8.4e-07 57.8 146 62.3
arahy.Tifrunner.gnm1.ann1.WNX5DB Arachis hypogaea HOM05D006719 ORTHO05D007063 2.4e-06 56.2 149 59.7
Hund20562 Selenicereus undatus HOM05D006719 ORTHO05D007063 4.2e-06 55.5 159 49.7
TPR.G425 Trifolium pratense HOM05D006719 ORTHO05D007063 7.1e-06 54.7 124 66.1


User provided reference genes

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