Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.1e-56 223.0 113 100.0
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 3.3e-27 125.2 66 87.9
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 2.1e-26 122.5 66 87.9
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 4.0e-25 118.2 64 84.4
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 2.0e-24 115.9 72 75.0
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 2.2e-23 112.5 79 69.6
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 3.7e-23 111.7 66 74.2
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 6.4e-23 110.9 64 78.1
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 8.3e-23 110.5 64 79.7
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 8.3e-23 110.5 65 80.0
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.1e-22 110.2 64 76.6
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.1e-22 110.2 64 76.6
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.1e-22 110.2 66 81.8
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 1.8e-22 109.4 64 76.6
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 2.4e-22 109.0 64 78.1
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 4.1e-22 108.2 66 75.8
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 7.0e-22 107.5 66 75.8
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 9.2e-22 107.1 72 68.1
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 9.2e-22 107.1 66 75.8
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 1.2e-21 106.7 61 77.0
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 2.0e-21 105.9 66 72.7
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 2.7e-21 105.5 66 74.2
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.7e-21 105.5 56 85.7
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.7e-21 105.5 66 72.7
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 2.7e-21 105.5 64 73.4
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 2.7e-21 105.5 66 74.2
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 2.7e-21 105.5 64 76.6
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 4.6e-21 104.8 72 68.1
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 5.9e-21 104.4 66 71.2
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.9e-21 104.4 66 71.2
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 5.9e-21 104.4 66 71.2
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 7.8e-21 104.0 66 72.7
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 7.8e-21 104.0 64 76.6
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 7.8e-21 104.0 69 71.0
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 1.0e-20 103.6 66 71.2
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 1.0e-20 103.6 66 72.7
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 1.3e-20 103.2 75 62.7
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.3e-20 103.2 66 72.7
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 1.7e-20 102.8 66 66.7
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.3e-20 102.4 66 72.7
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 2.3e-20 102.4 64 71.9
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 2.3e-20 102.4 66 71.2
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 2.3e-20 102.4 64 71.9
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 3.0e-20 102.1 66 65.2
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 3.0e-20 102.1 66 72.7
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 3.0e-20 102.1 64 73.4
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.0e-20 102.1 66 69.7
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 3.0e-20 102.1 66 68.2
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 5.0e-20 101.3 64 73.4
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 5.0e-20 101.3 64 73.4
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 5.0e-20 101.3 66 71.2
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 6.6e-20 100.9 66 66.7
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 6.6e-20 100.9 66 69.7
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.1e-19 100.1 83 51.8
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 1.5e-19 99.8 66 71.2
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 1.5e-19 99.8 64 70.3
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.9e-19 99.4 66 66.7
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 2.5e-19 99.0 66 66.7
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 2.5e-19 99.0 66 66.7
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 3.3e-19 98.6 66 71.2
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 5.6e-19 97.8 64 71.9
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 5.6e-19 97.8 66 66.7
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 5.6e-19 97.8 66 63.6
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 7.3e-19 97.4 66 65.2
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 7.3e-19 97.4 66 63.6
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 7.3e-19 97.4 66 68.2
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 9.5e-19 97.1 66 63.6
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 9.5e-19 97.1 66 60.6
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 1.2e-18 96.7 72 62.5
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 1.6e-18 96.3 66 66.7
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 2.1e-18 95.9 66 60.6
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 2.1e-18 95.9 64 67.2
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 2.8e-18 95.5 66 63.6
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 6.2e-18 94.4 64 67.2
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 8.0e-18 94.0 66 66.7
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 1.1e-17 93.6 66 66.7
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 1.4e-17 93.2 66 62.1
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 2.3e-17 92.4 66 65.2
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 2.3e-17 92.4 66 65.2
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 2.3e-17 92.4 66 65.2
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 2.3e-17 92.4 66 65.2
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 2.3e-17 92.4 66 62.1
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.3e-17 92.4 70 58.6
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 3.1e-17 92.0 66 60.6
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 5.2e-17 91.3 66 63.6
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 5.2e-17 91.3 66 63.6
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 5.2e-17 91.3 66 63.6
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 5.2e-17 91.3 66 63.6
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 6.8e-17 90.9 66 63.6
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 6.8e-17 90.9 64 65.6
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 8.9e-17 90.5 66 63.6
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 8.9e-17 90.5 64 65.6
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 1.2e-16 90.1 64 67.2
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.2e-16 90.1 66 60.6
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 1.5e-16 89.7 66 63.6
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.5e-16 89.7 66 63.6
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 2.0e-16 89.4 63 65.1
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.0e-16 89.4 66 60.6
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 3.4e-16 88.6 66 62.1
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 3.4e-16 88.6 66 62.1
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 3.4e-16 88.6 72 52.8
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 5.8e-16 87.8 73 57.5
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 7.5e-16 87.4 66 60.6
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 7.5e-16 87.4 66 60.6
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 9.8e-16 87.0 66 62.1
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 2.9e-15 85.5 64 59.4
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 6.4e-15 84.3 64 64.1
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 5.4e-14 81.3 66 56.1
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 4.6e-13 78.2 64 53.1
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 1.1e-11 73.6 63 58.7
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 7.3e-11 70.9 66 48.5
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 1.6e-10 69.7 64 43.8
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.1e-09 67.0 66 43.9
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 1.2e-08 63.5 65 46.2
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 9.9e-08 60.5 58 51.7


User provided reference genes

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