Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G007888 Populus trichocarpa HOM05D013500 ORTHO05D013583 9.6e-42 172.9 80 100.0
Potri.010G010432 Populus trichocarpa HOM05D013500 ORTHO05D013583 9.6e-42 172.9 80 100.0
Potri.010G007943 Populus trichocarpa HOM05D013500 ORTHO05D013583 1.3e-41 172.6 79 100.0
Potri.010G007899 Populus trichocarpa HOM05D013500 ORTHO05D013583 1.8e-40 168.7 80 98.8
Potri.010G007965 Populus trichocarpa HOM05D013500 ORTHO05D013583 2.6e-39 164.9 75 100.0
Potri.010G007855 Populus trichocarpa HOM05D013500 ORTHO05D013583 1.0e-38 162.9 80 96.2
Sabra10G0006800 Salix brachista HOM05D013500 ORTHO05D013583 5.9e-31 137.1 80 82.5
Ciclev10007206m.g Citrus clementina HOM05D013500 ORTHO05D013583 9.7e-10 66.6 79 44.3
Potri.010G007921 Populus trichocarpa HOM05D010452 ORTHO05D012890 4.8e-09 64.3 80 46.2
Potri.010G007976 Populus trichocarpa HOM05D010452 ORTHO05D012890 4.8e-09 64.3 80 46.2
Potri.010G008009 Populus trichocarpa HOM05D010452 ORTHO05D012890 5.3e-08 60.8 77 48.1
Potri.008G210450 Populus trichocarpa HOM05D010452 ORTHO05D012890 7.0e-08 60.5 79 48.1
Potri.008G210650 Populus trichocarpa HOM05D010452 ORTHO05D012890 7.0e-08 60.5 79 48.1
Potri.008G218433 Populus trichocarpa HOM05D010452 ORTHO05D012890 7.0e-08 60.5 79 48.1
Ciclev10006300m.g Citrus clementina HOM05D013500 ORTHO05D013583 9.1e-08 60.1 85 35.3
DCAR_023302 Daucus carota HOM05D013500 ORTHO05D013583 1.2e-07 59.7 86 41.9
Potri.010G007954 Populus trichocarpa HOM05D010452 ORTHO05D012890 1.2e-07 59.7 79 48.1
QL06p010616 Quercus lobata HOM05D024895 ORTHO05D013583 1.6e-07 59.3 76 42.1
Phvul.009G251200 Phaseolus vulgaris HOM05D010475 ORTHO05D012619 2.0e-07 58.9 78 43.6
Potri.010G008053 Populus trichocarpa HOM05D010452 ORTHO05D012890 2.0e-07 58.9 80 46.2
QL06p010557 Quercus lobata HOM05D024895 ORTHO05D013583 2.0e-07 58.9 76 42.1
Glyma.09G041750 Glycine max HOM05D010475 ORTHO05D012619 4.5e-07 57.8 79 41.8
Medtr2g435690 Medicago truncatula HOM05D010475 ORTHO05D012619 5.9e-07 57.4 78 44.9
Medtr2g435720 Medicago truncatula HOM05D010475 ORTHO05D012619 5.9e-07 57.4 78 44.9
Potri.010G007866 Populus trichocarpa HOM05D029258 ORTHO05D030088 5.9e-07 57.4 83 41.0
Glyma.15G151600 Glycine max HOM05D010475 ORTHO05D012619 7.7e-07 57.0 79 43.0
Lj6g0009487 Lotus japonicus HOM05D010475 ORTHO05D012619 7.7e-07 57.0 76 40.8
Potri.010G007998 Populus trichocarpa HOM05D010452 ORTHO05D012890 1.3e-06 56.2 80 43.8
Potri.010G008031 Populus trichocarpa HOM05D010452 ORTHO05D012890 1.3e-06 56.2 80 43.8
Potri.010G008042 Populus trichocarpa HOM05D010452 ORTHO05D012890 1.3e-06 56.2 80 43.8
Potri.010G010400 Populus trichocarpa HOM05D010452 ORTHO05D012890 1.3e-06 56.2 80 43.8
Ciclev10006295m.g Citrus clementina HOM05D013500 ORTHO05D013583 1.7e-06 55.8 90 40.0
Potri.010G007910 Populus trichocarpa HOM05D010452 ORTHO05D012890 1.7e-06 55.8 79 46.8
Phvul.009G250900 Phaseolus vulgaris HOM05D010475 ORTHO05D012619 2.9e-06 55.1 67 44.8
Potri.010G008020 Populus trichocarpa HOM05D010452 ORTHO05D012890 2.9e-06 55.1 80 43.8
Psat0s1652g0120 Pisum sativum HOM05D010475 ORTHO05D012619 3.8e-06 54.7 76 42.1
QL06p010738 Quercus lobata HOM05D024895 ORTHO05D013583 5.0e-06 54.3 69 43.5
Lalb_Chr07g0182301 Lupinus albus HOM05D010475 ORTHO05D012619 6.5e-06 53.9 73 42.5


User provided reference genes

Program Settings