Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G007811 Populus trichocarpa HOM05D010192 ORTHO05D012386 2.7e-109 398.7 198 100.0
Potri.010G007900 Populus trichocarpa HOM05D010192 ORTHO05D012386 2.7e-109 398.7 198 100.0
Potri.010G007922 Populus trichocarpa HOM05D010192 ORTHO05D012386 2.7e-109 398.7 198 100.0
Potri.010G007800 Populus trichocarpa HOM05D010192 ORTHO05D012386 7.1e-86 320.9 201 80.6
Potri.010G007911 Populus trichocarpa HOM05D010192 ORTHO05D012386 7.1e-86 320.9 201 80.6
Potri.010G010111 Populus trichocarpa HOM05D010192 ORTHO05D012386 7.1e-86 320.9 201 80.6
Potri.010G007822 Populus trichocarpa HOM05D010192 ORTHO05D012386 1.6e-85 319.7 201 80.1
Potri.010G007700 Populus trichocarpa HOM05D010192 ORTHO05D012386 4.6e-85 318.2 201 79.6
Potri.010G007500 Populus trichocarpa HOM05D010192 ORTHO05D012386 9.6e-83 310.5 201 78.6
Sabra19G0123000 Salix brachista HOM05D010192 ORTHO05D012386 5.3e-73 278.1 200 71.0
Sabra19G0131400 Salix brachista HOM05D010192 ORTHO05D012386 2.0e-72 276.2 200 70.5
Sabra19G0123100 Salix brachista HOM05D010192 ORTHO05D012386 4.5e-72 275.0 200 70.0
Potri.019G124500 Populus trichocarpa HOM05D010192 ORTHO05D012386 5.8e-64 248.1 204 66.2
Potri.019G122100 Populus trichocarpa HOM05D010192 ORTHO05D012386 4.6e-61 238.4 204 63.7
Potri.019G124750 Populus trichocarpa HOM05D010192 ORTHO05D012386 1.0e-55 220.7 199 60.3
Potri.019G124432 Populus trichocarpa HOM05D010192 ORTHO05D012386 3.8e-55 218.8 199 59.8
Potri.019G124400 Populus trichocarpa HOM05D010192 ORTHO05D012386 2.5e-54 216.1 199 59.3
Sabra19G0029700 Salix brachista HOM05D010192 ORTHO05D012386 1.1e-51 207.2 173 65.9
Sabra19G0131500 Salix brachista HOM05D010192 ORTHO05D012386 3.3e-51 205.7 198 59.1
Sabra19G0122900 Salix brachista HOM05D010192 ORTHO05D012386 4.1e-49 198.7 201 56.7
Potri.010G007833 Populus trichocarpa HOM05D010192 ORTHO05D012386 6.5e-31 138.3 122 65.6
Ciclev10022276m.g Citrus clementina HOM05D000535 ORTHO05D000427 1.5e-14 84.0 213 34.7
FAN04G0905 Fragaria x ananassa HOM05D002264 ORTHO05D002413 9.4e-14 81.3 204 34.8
FvH4_5g18500 Fragaria vesca HOM05D000535 ORTHO05D000427 3.6e-13 79.3 204 35.8
FAN18G1447 Fragaria x ananassa HOM05D002264 ORTHO05D000427 6.1e-13 78.6 204 34.8
FAN13G2343 Fragaria x ananassa HOM05D000535 ORTHO05D000427 1.8e-12 77.0 206 35.0
Potri.003G097900 Populus trichocarpa HOM05D010192 ORTHO05D050476 4.0e-12 75.9 201 34.3
Potri.004G067600 Populus trichocarpa HOM05D000535 ORTHO05D000427 4.0e-12 75.9 208 32.7
Hma1.2p1_0807F.1_g221410 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 5.2e-12 75.5 166 33.7
Sabra04G0045300 Salix brachista HOM05D000535 ORTHO05D000427 4.4e-11 72.4 207 31.9
DCAR_011412 Daucus carota HOM05D000535 ORTHO05D000427 1.3e-10 70.9 163 33.1
Sabra03G0066300 Salix brachista HOM05D010192 ORTHO05D050476 3.7e-10 69.3 167 36.5
Oeu018758.1 Olea europaea HOM05D000535 ORTHO05D000427 1.1e-09 67.8 203 32.5
CSS0038674 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 1.8e-09 67.0 184 33.7
HanXRQChr14g0444671 Helianthus annuus HOM05D000535 ORTHO05D000427 2.4e-09 66.6 199 30.2
Hma1.2p1_0989F.1_g244870 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 5.4e-09 65.5 183 32.2
Hma1.2p1_0807F.1_g221390 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 2.7e-08 63.2 189 32.8
Medtr6g078250 Medicago truncatula HOM05D000535 ORTHO05D000427 2.7e-08 63.2 205 30.7
CSS0030185 Camellia sinensis var. sinensis HOM05D000535 ORTHO05D000427 1.0e-07 61.2 207 28.5
Cc04_g08410 Coffea canephora HOM05D000535 ORTHO05D000427 1.3e-07 60.8 190 31.1
Sabra17G0125900 Salix brachista HOM05D000535 ORTHO05D000427 1.7e-07 60.5 179 33.0
Lj2g0005225 Lotus japonicus HOM05D000535 ORTHO05D000427 2.3e-07 60.1 208 28.8
Dinv08278 Davidia involucrata HOM05D000535 ORTHO05D000427 6.6e-07 58.5 177 31.1
Lsat_1_v5_gn_2_111441 Lactuca sativa HOM05D000535 ORTHO05D000427 8.6e-07 58.2 143 32.2
Glyma.16G212500 Glycine max HOM05D000535 ORTHO05D000427 1.5e-06 57.4 201 29.4
Solyc04g150105.1 Solanum lycopersicum HOM05D000535 ORTHO05D000427 2.5e-06 56.6 214 29.9
HanXRQChr06g0164771 Helianthus annuus HOM05D000535 ORTHO05D000427 3.3e-06 56.2 181 31.5
HanXRQChr06g0165041 Helianthus annuus HOM05D000535 ORTHO05D000427 5.6e-06 55.5 178 29.2
Hma1.2p1_0816F.1_g222920 Hydrangea macrophylla HOM05D000535 ORTHO05D000427 9.5e-06 54.7 183 29.5


User provided reference genes

Program Settings