Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 6.5e-250 867.1 482 100.0
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 3.0e-223 778.5 484 89.5
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 1.6e-147 526.9 504 68.3
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 3.5e-147 525.8 499 68.5
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 2.2e-133 479.9 499 63.1
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 1.4e-127 460.7 523 61.0
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 1.4e-122 444.1 512 56.8
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 5.1e-122 442.2 511 56.4
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 1.5e-121 440.7 499 56.3
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 1.7e-120 437.2 510 55.5
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 4.8e-120 435.6 465 59.6
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 1.4e-119 434.1 513 58.7
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 6.9e-119 431.8 508 59.3
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 1.2e-118 431.0 507 59.6
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 3.3e-113 412.9 520 53.5
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 5.7e-113 412.1 476 60.9
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 5.7e-113 412.1 508 57.7
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 1.3e-112 411.0 515 56.9
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 2.8e-112 409.8 508 57.5
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 6.3e-112 408.7 508 53.0
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 1.1e-111 407.9 508 57.1
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 1.4e-111 407.5 520 57.1
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 1.2e-110 404.4 512 55.7
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 5.5e-108 395.6 512 55.3
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 1.6e-107 394.0 491 57.4
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 1.0e-106 391.3 515 54.8
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 3.0e-106 389.8 471 58.0
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 3.0e-106 389.8 512 56.2
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 6.7e-106 388.7 501 57.5
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 6.7e-106 388.7 508 52.0
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.8e-106 388.3 501 57.5
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 2.2e-104 383.6 498 52.0
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 6.3e-104 382.1 526 53.2
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 1.1e-103 381.3 495 50.3
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 1.1e-103 381.3 520 54.8
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 2.0e-102 377.1 495 49.1
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 1.1e-100 371.3 520 48.8
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 2.7e-99 366.7 505 54.5
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 1.4e-98 364.4 505 48.5
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.5e-97 360.9 502 49.8
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 2.6e-97 360.1 514 47.7
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 4.4e-97 359.4 520 48.3
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 7.5e-97 358.6 513 48.9
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 9.7e-97 358.2 502 49.6
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 9.7e-97 358.2 502 49.6
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 1.3e-96 357.8 467 57.2
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 4.8e-96 355.9 453 55.0
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.1e-95 354.8 504 49.6
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 1.4e-95 354.4 509 52.5
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 5.3e-95 352.4 524 47.9
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 9.1e-95 351.7 483 55.9
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 4.5e-94 349.4 509 49.1
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 1.0e-93 348.2 504 53.6
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 1.3e-93 347.8 462 54.3
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 2.9e-93 346.7 500 46.2
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 5.0e-93 345.9 483 48.2
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 5.0e-93 345.9 547 46.6
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 5.0e-93 345.9 547 46.1
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 6.5e-93 345.5 515 48.2
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 6.5e-93 345.5 542 46.9
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 7.2e-92 342.0 467 50.7
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.6e-91 340.9 502 48.6
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 8.0e-91 338.6 486 48.4
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 1.0e-90 338.2 490 54.5
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 5.2e-90 335.9 453 51.7
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 5.2e-90 335.9 516 52.1
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 8.8e-90 335.1 468 48.9
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 8.8e-90 335.1 487 52.0
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 8.8e-90 335.1 453 50.8
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 7.5e-89 332.0 462 50.0
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 6.3e-88 328.9 486 47.7
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 1.4e-87 327.8 486 51.0
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 4.1e-87 326.2 513 46.6
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 4.1e-87 326.2 504 49.0
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 5.4e-87 325.9 513 47.2
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 1.0e-85 321.6 536 45.3
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 1.7e-85 320.9 460 50.0
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 8.6e-85 318.5 487 50.3
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 1.5e-84 317.8 455 48.8
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 4.2e-84 316.2 451 53.7
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 4.2e-84 316.2 456 53.5
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 1.8e-82 310.8 552 42.2
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 4.0e-82 309.7 485 48.5
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 4.0e-82 309.7 534 45.5
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 8.9e-82 308.5 493 51.1
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 2.0e-81 307.4 451 52.8
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 5.7e-81 305.8 486 50.8
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 1.3e-80 304.7 483 47.2
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 1.7e-80 304.3 484 52.1
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 4.9e-80 302.8 433 49.4
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 1.8e-79 300.8 508 51.0
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 3.9e-77 293.1 485 46.2
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 8.6e-77 292.0 517 44.3
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 4.9e-72 276.2 335 58.8
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 1.9e-71 274.2 504 44.2
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 8.6e-69 265.4 555 43.2
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 1.5e-68 264.6 401 45.9
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.4e-66 258.1 300 53.7
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 2.4e-63 247.3 301 53.2
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 3.5e-62 243.4 458 41.9
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 1.7e-61 241.1 293 60.1
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 6.6e-61 239.2 517 39.3
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 1.6e-59 234.6 507 38.3
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 4.7e-59 233.0 492 43.1
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 5.2e-58 229.6 568 37.3
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 2.6e-57 227.3 296 49.0
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 4.6e-54 216.5 452 41.2
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 1.3e-53 214.9 282 51.1
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 2.1e-51 207.6 520 39.0
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 1.4e-50 204.9 296 47.0
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 2.5e-44 184.1 495 42.0
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 1.7e-40 171.4 165 58.2
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 2.1e-38 164.5 481 34.3
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 3.2e-31 140.6 152 57.2
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 7.9e-30 136.0 161 57.1
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 3.9e-29 133.7 221 50.7
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 4.3e-28 130.2 136 59.6
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 7.4e-28 129.4 484 31.4
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 6.9e-26 122.9 72 80.6
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 9.0e-26 122.5 142 54.2
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 6.5e-24 116.3 72 77.8
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 8.7e-21 105.9 255 33.3
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 5.3e-18 96.7 96 52.1
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 2.1e-14 84.7 72 56.9
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 7.4e-12 76.3 268 29.1
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 2.2e-11 74.7 458 26.4
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 2.8e-11 74.3 93 37.6
FvH4_5g32480 Fragaria vesca HOM05D005806 ORTHO05D007119 5.3e-10 70.1 104 53.8
CBR_g39021 Chara braunii HOM05D000003 ORTHO05D000004 1.3e-08 65.5 85 34.1
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 2.7e-06 57.8 524 30.3


User provided reference genes

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