Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Potri.009G162200 Populus trichocarpa HOM05D003975 ORTHO05D009899 1.4e-49 199.1 90 100.0
Sabra09G0126700 Salix brachista HOM05D003975 ORTHO05D009762 6.8e-44 180.3 87 92.0
Sabra15G0048400 Salix brachista HOM05D003975 ORTHO05D009899 4.4e-43 177.6 87 90.8
Sabra15G0060100 Salix brachista HOM05D003975 ORTHO05D009899 4.4e-43 177.6 87 90.8
Sabra15G0046300 Salix brachista HOM05D003975 ORTHO05D009899 2.2e-42 175.3 87 89.7
Sabra15G0052000 Salix brachista HOM05D003975 ORTHO05D009899 2.2e-42 175.3 87 89.7
Sabra15G0031600 Salix brachista HOM05D003975 ORTHO05D009899 3.7e-42 174.5 86 90.7
Sabra15G0053900 Salix brachista HOM05D003975 ORTHO05D009899 4.9e-42 174.1 87 89.7
Sabra15G0053200 Salix brachista HOM05D003975 ORTHO05D009899 1.9e-41 172.2 85 90.6
Potri.004G201000 Populus trichocarpa HOM05D003975 ORTHO05D009899 7.0e-41 170.2 90 82.2
Sabra04G0136000 Salix brachista HOM05D003975 ORTHO05D009762 2.5e-38 161.8 87 80.5
QL01p011344 Quercus lobata HOM05D003975 ORTHO05D009899 4.6e-32 141.0 86 74.4
Thecc.09G275700 Theobroma cacao HOM05D003975 ORTHO05D009899 1.3e-31 139.4 86 73.3
Thecc.09G155000 Theobroma cacao HOM05D003975 ORTHO05D009899 1.7e-31 139.0 86 73.3
GSVIVG01036058001 Vitis vinifera HOM05D003975 ORTHO05D009899 2.3e-31 138.7 86 73.3
RcHm_v2.0_Chr5g0047291 Rosa chinensis HOM05D003975 ORTHO05D009899 3.9e-31 137.9 86 74.4
Atru.chr3.3141 Acer truncatum HOM05D003975 ORTHO05D009899 8.6e-31 136.7 86 73.3
Hma1.2p1_0793F.1_g218650 Hydrangea macrophylla HOM05D003975 ORTHO05D009899 8.6e-31 136.7 86 73.3
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 1.1e-30 136.3 85 75.3
Cfa009967 Carpinus fangiana HOM05D003975 ORTHO05D009899 1.5e-30 136.0 86 72.1
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 1.5e-30 136.0 85 75.3
Gorai.001G124000 Gossypium raimondii HOM05D003975 ORTHO05D009899 1.5e-30 136.0 86 69.8
Solyc11g068810.2 Solanum lycopersicum HOM05D003975 ORTHO05D009899 2.5e-30 135.2 85 71.8
Sopen11g027530 Solanum pennellii HOM05D003975 ORTHO05D009899 2.5e-30 135.2 85 71.8
Haze_23328 Corylus avellana HOM05D003975 ORTHO05D009899 3.3e-30 134.8 86 72.1
Gohir.D07G115700 Gossypium hirsutum HOM05D003975 ORTHO05D009899 4.3e-30 134.4 86 68.6
ClCG02G022390 Citrullus lanatus HOM05D003975 ORTHO05D009899 5.6e-30 134.0 85 70.6
Eucgr.J00540 Eucalyptus grandis HOM05D003975 ORTHO05D009899 1.2e-29 132.9 86 72.1
MD03G1152900 Malus domestica HOM05D003975 ORTHO05D009899 1.2e-29 132.9 86 72.1
PGSC0003DMG400019630 Solanum tuberosum HOM05D003975 ORTHO05D009899 2.1e-29 132.1 85 70.6
Dinv08130 Davidia involucrata HOM05D003975 ORTHO05D009899 4.7e-29 131.0 86 69.8
Duzib150G1666 Durio zibethinus HOM05D003975 ORTHO05D009899 4.7e-29 131.0 86 68.6
Gohir.A07G112200 Gossypium hirsutum HOM05D003975 ORTHO05D009899 4.7e-29 131.0 86 67.4
PSO339G0200 Papaver somniferum HOM05D003975 ORTHO05D009899 6.2e-29 130.6 86 67.4
PSO384G0061 Papaver somniferum HOM05D003975 ORTHO05D009899 6.2e-29 130.6 86 67.4
CSS0027551 Camellia sinensis var. sinensis HOM05D003975 ORTHO05D009899 8.1e-29 130.2 85 69.4
CANSAT54G1521 Cannabis sativa HOM05D003975 ORTHO05D009899 8.1e-29 130.2 84 70.2
COL.COLO4_22656 Corchorus olitorius HOM05D003975 ORTHO05D009899 1.8e-28 129.0 86 68.6
Prupe.6G140000 Prunus persica HOM05D003975 ORTHO05D009899 1.8e-28 129.0 86 69.8
Sed0002680 Sechium edule HOM05D003975 ORTHO05D009899 2.3e-28 128.6 85 68.2
CAN.G745.37 Capsicum annuum HOM05D003975 ORTHO05D009899 5.2e-28 127.5 85 68.2
Nitab4.5_0001135g0190 Nicotiana tabacum HOM05D003975 ORTHO05D009899 5.2e-28 127.5 85 67.1
TAR633G2299 Trochodendron aralioides HOM05D003975 ORTHO05D009899 8.9e-28 126.7 69 78.3
SalBow6G3564 Salvia bowleyana HOM05D003975 ORTHO05D009899 1.2e-27 126.3 86 62.8
MBI01_g04527_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 1.5e-27 125.9 86 64.0
CAN.G745.38 Capsicum annuum HOM05D003975 ORTHO05D009899 2.0e-27 125.6 85 67.1
Migut.D02414 Erythranthe guttata HOM05D003975 ORTHO05D009899 2.0e-27 125.6 86 64.0
Cc01_g08600 Coffea canephora HOM05D003975 ORTHO05D009899 4.4e-27 124.4 86 62.8
Nitab4.5_0000893g0020 Nicotiana tabacum HOM05D003975 ORTHO05D009899 4.4e-27 124.4 85 67.1
ATR0772G086 Amborella trichopoda HOM05D003975 ORTHO05D009899 5.8e-27 124.0 86 62.8
Peaxi162Scf00224g00092 Petunia axillaris HOM05D003975 ORTHO05D009899 9.9e-27 123.2 67 77.6
MELO3C014515.2 Cucumis melo HOM05D003975 ORTHO05D009899 1.7e-26 122.5 85 65.9
TWI31G0968 Tripterygium wilfordii HOM05D003975 ORTHO05D009899 1.1e-25 119.8 83 66.3
Ciclev10029713m.g Citrus clementina HOM05D003975 ORTHO05D009899 1.4e-25 119.4 86 65.1
CsaV3_6G038520 Cucumis sativus L. HOM05D003975 ORTHO05D009899 1.4e-25 119.4 83 66.3
DCAR_013070 Daucus carota HOM05D003975 ORTHO05D009899 2.4e-25 118.6 86 64.0
Aqoxy4G02677 Aquilegia oxysepala HOM05D003975 ORTHO05D009899 3.2e-25 118.2 86 62.8
HanXRQChr09g0248811 Helianthus annuus HOM05D003975 ORTHO05D009899 3.2e-25 118.2 86 60.5
Nn6g34748 Nelumbo nucifera HOM05D003975 ORTHO05D009899 4.1e-25 117.9 86 60.5
THA.LOC104799562 Tarenaya hassleriana HOM05D003975 ORTHO05D009899 4.1e-25 117.9 88 63.6
BcaC04g19558 Brassica carinata HOM05D003975 ORTHO05D009899 7.1e-25 117.1 86 64.0
C09p54430 Brassica napus HOM05D003975 ORTHO05D009899 7.1e-25 117.1 86 64.0
BolC9t58312H Brassica oleracea HOM05D003975 ORTHO05D009899 7.1e-25 117.1 86 64.0
Glyma.08G290000 Glycine max HOM05D003975 ORTHO05D009899 9.2e-25 116.7 85 61.2
A10p18580 Brassica napus HOM05D003975 ORTHO05D009899 1.6e-24 115.9 86 64.0
AT5G22210 Arabidopsis thaliana HOM05D003975 ORTHO05D009899 2.7e-24 115.2 87 63.2
Carub.0006s1995 Capsella rubella HOM05D003975 ORTHO05D009899 2.7e-24 115.2 89 65.2
Lsat_1_v5_gn_2_56181 Lactuca sativa HOM05D000240 ORTHO05D001153 3.5e-24 114.8 86 54.7
Ah.01g020290 Amaranthus hybridus HOM05D003975 ORTHO05D009899 4.6e-24 114.4 86 59.3
ECA238G1997 Erigeron canadensis HOM05D003975 ORTHO05D009899 4.6e-24 114.4 86 58.1
CARHR191340 Cardamine hirsuta HOM05D003975 ORTHO05D009899 6.0e-24 114.0 87 62.1
Lalb_Chr09g0335081 Lupinus albus HOM05D003975 ORTHO05D009899 6.0e-24 114.0 86 60.5
unitig_0.g1469 Utricularia gibba HOM05D003975 ORTHO05D009899 7.8e-24 113.6 86 59.3
Sp6g23020 Schrenkiella parvula HOM05D003975 ORTHO05D009899 1.0e-23 113.2 87 62.1
BraA10t43938Z Brassica rapa HOM05D003975 ORTHO05D009899 1.3e-23 112.8 86 62.8
AUR62011465 Chenopodium quinoa HOM05D003975 ORTHO05D009899 1.7e-23 112.5 86 57.0
Glyma.18G134500 Glycine max HOM05D003975 ORTHO05D009899 1.7e-23 112.5 85 58.8
BcaB08g36448 Brassica carinata HOM05D003975 ORTHO05D009899 3.0e-23 111.7 86 61.6
AL6G33210 Arabidopsis lyrata HOM05D003975 ORTHO05D009899 5.1e-23 110.9 87 60.9
AUR62016590 Chenopodium quinoa HOM05D003975 ORTHO05D009899 5.1e-23 110.9 86 55.8
Phvul.003G054000 Phaseolus vulgaris HOM05D003975 ORTHO05D009899 5.1e-23 110.9 85 57.6
arahy.Tifrunner.gnm1.ann1.QQFJ2J Arachis hypogaea HOM05D003975 ORTHO05D009899 6.6e-23 110.5 86 59.3
arahy.Tifrunner.gnm1.ann1.V52YDZ Arachis hypogaea HOM05D003975 ORTHO05D009899 6.6e-23 110.5 86 59.3
Sc03g0003650 Simmondsia chinensis HOM05D003975 ORTHO05D009899 2.5e-22 108.6 86 59.3
HPP92_009773 Vanilla planifolia HOM05D000917 ORTHO05D009899 4.7e-21 104.4 86 52.3
HPP92_009742 Vanilla planifolia HOM05D000917 ORTHO05D000764 4.0e-20 101.3 86 51.2
EL10Ac9g21860 Beta vulgaris HOM05D003975 ORTHO05D009899 1.5e-19 99.4 86 53.5
TAR268G0001 Trochodendron aralioides HOM05D001423 ORTHO05D001412 6.4e-18 94.0 81 59.3
MBI04_g20761_MAGBIO Magnolia biondii HOM05D003975 ORTHO05D009899 5.1e-07 57.8 48 52.1
SEGI_31848 Sequoiadendron giganteum HOM05D003975 ORTHO05D009899 4.3e-06 54.7 40 55.0


User provided reference genes

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